RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 RPL27P61353 136 aaKnown RBP2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 RAB11AP62491 216 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 EEF1A1P68104 462 aaKnown RBP2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 CDKL1Q00532 357 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 IRF8Q02556 426 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 MFGE8Q08431 387 aaPredicted RBP2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 BST2Q10589 180 aaKnown RBP2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 FOXF2Q12947 444 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 MESDQ14696 234 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 RAB11BQ15907 218 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 MRPL23Q16540 153 aaKnown RBP2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 ACCSLQ4AC99 568 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 HSP90AA4PQ58FG1 418 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 EFHC1Q5JVL4 640 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 SIRPB2Q5JXA9 342 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 CCDC122Q5T0U0 273 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 C6orf183Q5T699 404 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 EEF1A1P5Q5VTE0 462 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 PLPP4Q5VZY2 271 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 ACSM5Q6NUN0 579 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 FAM71F2Q6NXP2 309 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 BHLHB9Q6PI77 547 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 TMEM220Q6QAJ8 160 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 TMEM207Q6UWW9 146 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 SCARA5Q6ZMJ2 495 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 NET1Q7Z628 596 aaPredicted RBP2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 SFR1Q86XK3 245 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 VRK2Q86Y07 508 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 MICU2Q8IYU8 434 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 GPC2Q8N158 579 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 ICA1LQ8NDH6 482 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 OR5L2Q8NGL0 311 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 OR4A15Q8NGL6 344 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 PRSS3P2Q8NHM4 247 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 LKAAEAR1Q8TD35 194 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 MITD1Q8WV92 249 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 TMED6Q8WW62 240 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 ELMO1Q92556 727 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 SLC38A4Q969I6 547 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 TMEM143Q96AN5 459 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 SLC47A1Q96FL8 570 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 SCRN2Q96FV2 425 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 CERS2Q96G23 380 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 SDSLQ96GA7 329 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 MSANTD3Q96H12 275 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 C12orf42Q96LP6 360 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 RHNO1Q9BSD3 238 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 PARD6BQ9BYG5 372 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 FAM49AQ9H0Q0 323 aaPredicted RBP2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 SPACA1Q9HBV2 294 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 DUS2Q9NX74 493 aaKnown RBP2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 IL36GQ9NZH8 169 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 KLRF1Q9NZS2 232 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 CHMP5Q9NZZ3 219 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 ANAPC7Q9UJX3 599 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 IKZF2Q9UKS7 526 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 C15orf41Q9Y2V0 281 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 ALG6Q9Y672 507 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 CDK12Q9NYV4 1490 aaPredicted RBP2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 CEP170Q5SW79 1584 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 CEP350Q5VT06 3117 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 AQRO60306 1485 aaKnown RBP eCLIP2.93□□□□□ -1.945e-9■■■■■ 36.4
HERPUD1-211ENST00000566550 PLB1Q6P1J6 1458 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 A0A1W2PPV4 95 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 SMCO2A6NFE2 343 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 GLTPD2A6NH11 291 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 OR6C75A6NL08 312 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 PRR23D1E9PI22 279 aaPredicted RBP2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 K7ERI5 159 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 P2RY10O00398 339 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 DLGAP1O14490 977 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 CCSO14618 274 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 TRDMT1O14717 391 aaKnown RBP2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 RGS16O15492 202 aaPredicted RBP2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 CHMP2AO43633 222 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 CNOT3O75175 753 aaKnown RBP2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 OR2J3O76001 311 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 BAG4O95429 457 aaKnown RBP2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 IGF1P05019 195 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 TPM3P06753 285 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 CRYGBP07316 175 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 IGFBP1P08833 259 aaPredicted RBP2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 CLTAP09496 248 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 HOXC6P09630 235 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 PRR23D2P0DMB1 279 aaPredicted RBP2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 PRKAR1AP10644 381 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 MCF2P10911 925 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 GP1BBP13224 206 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 EFNA1P20827 205 aaPredicted RBP2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 GSTM3P21266 225 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 ZNF10P21506 573 aaPredicted RBP2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 TBXA2RP21731 343 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 MSR1P21757 451 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 CD1CP29017 333 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 GTF2E2P29084 291 aaKnown RBP2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 MAT2AP31153 395 aaKnown RBP2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 BDKRB1P46663 353 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 FHITP49789 147 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 RAB9AP51151 201 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 FUT6P51993 359 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 180 ms