RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 VOPP1Q96AW1 172 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 LRIG1Q96JA1 1093 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 FCRL5Q96RD9 977 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 DDOQ99489 341 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 FZD8Q9H461 694 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 ZNF768Q9H5H4 540 aaKnown RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 NLGN3Q9NZ94 848 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 VAPAQ9P0L0 249 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 NDOR1Q9UHB4 597 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 LACTBL1A8MY62 500 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 SNCGO76070 127 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 GAAP10253 952 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 CCND3P30281 292 aaPredicted RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 CDC42P60953 191 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 DUSP4Q13115 394 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 MLC1Q15049 377 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 CLEC12BQ2HXU8 276 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 LCTLQ6UWM7 567 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 MPZL3Q6UWV2 235 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 FAM83HQ6ZRV2 1179 aaPredicted RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 DEFB106AQ8N104 65 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 SPICQ8N5J4 248 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 NANOGP1Q8N7R0 232 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 ORAI1Q96D31 301 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 ZIC5Q96T25 663 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 MRPL45Q9BRJ2 306 aaKnown RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 SLC6A20Q9NP91 592 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 CHRNA9Q9UGM1 479 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 FEM1BQ9UK73 627 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 UBE2J1Q9Y385 318 aaPredicted RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 ANKDD1BA6NHY2 528 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 MCRIP1C9JLW8 97 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 CDC7O00311 574 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 YY2O15391 372 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 SLC25A17O43808 307 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 PRKYO43930 277 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 CACNG3O60359 315 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 OR6A2O95222 327 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 GIPP09681 153 aaPredicted RBP2.75□□□□□ -1.97
CHD9-218ENST00000566029 PEPDP12955 493 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 MUC1P15941 1255 aaPredicted RBP2.75□□□□□ -1.97
CHD9-218ENST00000566029 MVDP53602 400 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 KIAA1024LP59773 190 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 PPIGQ13427 754 aaKnown RBP eCLIP2.75□□□□□ -1.97
CHD9-218ENST00000566029 ZNF460Q14592 562 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 SAPCD1Q5SSQ6 148 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 TMEM225Q6GV28 225 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 SLITRK4Q8IW52 837 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 TMEM130Q8N3G9 435 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 KLHL36Q8N4N3 616 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 TEFMQ96QE5 360 aaKnown RBP2.75□□□□□ -1.97
CHD9-218ENST00000566029 DIRC2Q96SL1 478 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 EPYCQ99645 322 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 PIP5K1AQ99755 562 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 ELOVL1Q9BW60 279 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 C11orf49Q9H6J7 331 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 ANKRA2Q9H9E1 313 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 ASB6Q9NWX5 421 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 WBP1LQ9NX94 342 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 FZD10Q9ULW2 581 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 WASF3Q9UPY6 502 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 EXO1Q9UQ84 846 aaKnown RBP2.75□□□□□ -1.97
CHD9-218ENST00000566029 PAM16Q9Y3D7 125 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 MMACHCQ9Y4U1 282 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 TEX13CA0A0J9YWL9 993 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 A0A1B0GV72 72 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 BTBD17A6NE02 478 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 PRKRAO75569 313 aaKnown RBP2.75□□□□□ -1.97
CHD9-218ENST00000566029 SCGB1D2O95969 90 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 CST3P01034 146 aaPredicted RBP2.75□□□□□ -1.97
CHD9-218ENST00000566029 JCHAINP01591 159 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 ESR1P03372 595 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 GOT1P17174 413 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 GRK6P43250 576 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 SOX4Q06945 474 aaPredicted RBP2.75□□□□□ -1.97
CHD9-218ENST00000566029 SNAPC1Q16533 368 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 CD200R1LQ6Q8B3 271 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 TMEM185AQ8NFB2 350 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 ZNF48Q96MX3 618 aaPredicted RBP2.75□□□□□ -1.97
CHD9-218ENST00000566029 SLC2A13Q96QE2 648 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 ATF6BQ99941 703 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 NKX6-2Q9C056 277 aaPredicted RBP2.75□□□□□ -1.97
CHD9-218ENST00000566029 CHST11Q9NPF2 352 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 ST3GAL6Q9Y274 331 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 DBX1A6NMT0 343 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 GPR182O15218 404 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 TSPAN6O43657 245 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 SLC16A8O95907 504 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 PAX1P15863 534 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 HOXC12P31275 282 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 HOXC13P31276 330 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 ICAM3P32942 547 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 MMP12P39900 470 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 MDH2P40926 338 aaKnown RBP2.75□□□□□ -1.97
CHD9-218ENST00000566029 E2F1Q01094 437 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 HLXQ14774 488 aaPredicted RBP2.75□□□□□ -1.97
CHD9-218ENST00000566029 INPP5JQ15735 1006 aaPredicted RBP2.75□□□□□ -1.97
CHD9-218ENST00000566029 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.75□□□□□ -1.97
CHD9-218ENST00000566029 HEPHL1Q6MZM0 1159 aa2.75□□□□□ -1.97
CHD9-218ENST00000566029 NOTUMQ6P988 496 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms