RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 PINK1Q9BXM7 581 aa11.45□□□□□ -0.58
RNF40-208ENST00000565995 ROPN1BQ9BZX4 212 aaPredicted RBP11.45□□□□□ -0.58
RNF40-208ENST00000565995 KLHL4Q9C0H6 718 aa11.45□□□□□ -0.58
RNF40-208ENST00000565995 ROPN1Q9HAT0 212 aaPredicted RBP11.45□□□□□ -0.58
RNF40-208ENST00000565995 ZNF446Q9NWS9 450 aa11.45□□□□□ -0.58
RNF40-208ENST00000565995 AP4B1Q9Y6B7 739 aa11.45□□□□□ -0.58
RNF40-208ENST00000565995 SVEP1Q4LDE5 3571 aa11.45□□□□□ -0.58
RNF40-208ENST00000565995 OR2M5A3KFT3 312 aa11.44□□□□□ -0.58
RNF40-208ENST00000565995 H0YC42 278 aa11.44□□□□□ -0.58
RNF40-208ENST00000565995 RGS16O15492 202 aaPredicted RBP11.44□□□□□ -0.58
RNF40-208ENST00000565995 ERAL1O75616 437 aaKnown RBP11.44□□□□□ -0.58
RNF40-208ENST00000565995 KLHL2O95198 593 aa11.44□□□□□ -0.58
RNF40-208ENST00000565995 SIX3O95343 332 aaPredicted RBP11.44□□□□□ -0.58
RNF40-208ENST00000565995 ALDOAP04075 364 aaKnown RBP11.44□□□□□ -0.58
RNF40-208ENST00000565995 DANCRP0C864 163 aa11.44□□□□□ -0.58
RNF40-208ENST00000565995 FCGR2AP12318 317 aa11.44□□□□□ -0.58
RNF40-208ENST00000565995 GFAPP14136 432 aa11.44□□□□□ -0.58
RNF40-208ENST00000565995 PCSK2P16519 638 aa11.44□□□□□ -0.58
RNF40-208ENST00000565995 TPD52P55327 224 aaPredicted RBP11.44□□□□□ -0.58
RNF40-208ENST00000565995 CLDN20P56880 219 aa11.44□□□□□ -0.58
RNF40-208ENST00000565995 RPS4XP62701 263 aaKnown RBP11.44□□□□□ -0.58
RNF40-208ENST00000565995 MRPS22P82650 360 aaKnown RBP11.44□□□□□ -0.58
RNF40-208ENST00000565995 MRPS35P82673 323 aaKnown RBP11.44□□□□□ -0.58
RNF40-208ENST00000565995 PON3Q15166 354 aa11.44□□□□□ -0.58
RNF40-208ENST00000565995 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.44□□□□□ -0.58
RNF40-208ENST00000565995 TMEM44Q2T9K0 475 aa11.44□□□□□ -0.58
RNF40-208ENST00000565995 NPSR1Q6W5P4 371 aa11.44□□□□□ -0.58
RNF40-208ENST00000565995 LARP4Q71RC2 724 aaKnown RBP eCLIP11.44□□□□□ -0.58
RNF40-208ENST00000565995 COMMD6Q7Z4G1 85 aa11.44□□□□□ -0.58
RNF40-208ENST00000565995 UBQLNLQ8IYU4 475 aa11.44□□□□□ -0.58
RNF40-208ENST00000565995 RIBC1Q8N443 379 aaPredicted RBP11.44□□□□□ -0.58
RNF40-208ENST00000565995 OR52B6Q8NGF0 335 aa11.44□□□□□ -0.58
RNF40-208ENST00000565995 LILRB1Q8NHL6 650 aaPredicted RBP11.44□□□□□ -0.58
RNF40-208ENST00000565995 DCAKDQ8WVC6 231 aa11.44□□□□□ -0.58
RNF40-208ENST00000565995 KCTD4Q8WVF5 259 aa11.44□□□□□ -0.58
RNF40-208ENST00000565995 KLHL29Q96CT2 875 aa11.44□□□□□ -0.58
RNF40-208ENST00000565995 PLPPR2Q96GM1 343 aa11.44□□□□□ -0.58
RNF40-208ENST00000565995 CDK15Q96Q40 435 aa11.44□□□□□ -0.58
RNF40-208ENST00000565995 DSN1Q9H410 356 aa11.44□□□□□ -0.58
RNF40-208ENST00000565995 NOL11Q9H8H0 719 aaKnown RBP11.44□□□□□ -0.58
RNF40-208ENST00000565995 BRF2Q9HAW0 419 aa11.44□□□□□ -0.58
RNF40-208ENST00000565995 ZNF180Q9UJW8 692 aa11.44□□□□□ -0.58
RNF40-208ENST00000565995 ZNF780BQ9Y6R6 833 aa11.44□□□□□ -0.58
RNF40-208ENST00000565995 TRIM49D1C9J1S8 452 aa11.43□□□□□ -0.58
RNF40-208ENST00000565995 PLOD3O60568 738 aa11.43□□□□□ -0.58
RNF40-208ENST00000565995 SS18L1O75177 396 aaPredicted RBP11.43□□□□□ -0.58
RNF40-208ENST00000565995 SASH3O75995 380 aa11.43□□□□□ -0.58
RNF40-208ENST00000565995 AQP8O94778 261 aa11.43□□□□□ -0.58
RNF40-208ENST00000565995 C2P06681 752 aa11.43□□□□□ -0.58
RNF40-208ENST00000565995 HK1P19367 917 aa11.43□□□□□ -0.58
RNF40-208ENST00000565995 GCAP28676 217 aa11.43□□□□□ -0.58
RNF40-208ENST00000565995 IL12BP29460 328 aa11.43□□□□□ -0.58
RNF40-208ENST00000565995 EVI2BP34910 448 aa11.43□□□□□ -0.58
RNF40-208ENST00000565995 CORO7P57737 925 aa11.43□□□□□ -0.58
RNF40-208ENST00000565995 RPS3AP61247 264 aaKnown RBP11.43□□□□□ -0.58
RNF40-208ENST00000565995 IRF9Q00978 393 aa11.43□□□□□ -0.58
RNF40-208ENST00000565995 TRAF3Q13114 568 aa11.43□□□□□ -0.58
RNF40-208ENST00000565995 LTB4RQ15722 352 aa11.43□□□□□ -0.58
RNF40-208ENST00000565995 MROH9Q5TGP6 573 aa11.43□□□□□ -0.58
RNF40-208ENST00000565995 BEND4Q6ZU67 534 aa11.43□□□□□ -0.58
RNF40-208ENST00000565995 MAPK1IP1LQ8NDC0 245 aa11.43□□□□□ -0.58
RNF40-208ENST00000565995 OR4K17Q8NGC6 315 aa11.43□□□□□ -0.58
RNF40-208ENST00000565995 AKAP1Q92667 903 aaKnown RBP eCLIP11.43□□□□□ -0.58
RNF40-208ENST00000565995 TRMT61AQ96FX7 289 aaKnown RBP11.43□□□□□ -0.58
RNF40-208ENST00000565995 GMPPAQ96IJ6 420 aaPredicted RBP11.43□□□□□ -0.58
RNF40-208ENST00000565995 STMN4Q9H169 189 aaPredicted RBP11.43□□□□□ -0.58
RNF40-208ENST00000565995 ZBTB26Q9HCK0 441 aa11.43□□□□□ -0.58
RNF40-208ENST00000565995 FANCFQ9NPI8 374 aa11.43□□□□□ -0.58
RNF40-208ENST00000565995 SDHAF3Q9NRP4 125 aa11.43□□□□□ -0.58
RNF40-208ENST00000565995 PPP4R1LQ9P1A2 415 aa11.43□□□□□ -0.58
RNF40-208ENST00000565995 ABCG2Q9UNQ0 655 aa11.43□□□□□ -0.58
RNF40-208ENST00000565995 LAMP3Q9UQV4 416 aa11.43□□□□□ -0.58
RNF40-208ENST00000565995 GPR52Q9Y2T5 361 aa11.43□□□□□ -0.58
RNF40-208ENST00000565995 IGLV3-32A0A0A0MS00 114 aa11.42□□□□□ -0.58
RNF40-208ENST00000565995 HMX2A2RU54 273 aa11.42□□□□□ -0.58
RNF40-208ENST00000565995 C17orf51A8MQB3 221 aa11.42□□□□□ -0.58
RNF40-208ENST00000565995 STX16-NPEPL1H3BU86 382 aa11.42□□□□□ -0.58
RNF40-208ENST00000565995 STX16O14662 325 aa11.42□□□□□ -0.58
RNF40-208ENST00000565995 TP53P04637 393 aaPredicted RBP11.42□□□□□ -0.58
RNF40-208ENST00000565995 SNRPAP09012 282 aaKnown RBP11.42□□□□□ -0.58
RNF40-208ENST00000565995 PSMB1P20618 241 aaKnown RBP11.42□□□□□ -0.58
RNF40-208ENST00000565995 KRT20P35900 424 aa11.42□□□□□ -0.58
RNF40-208ENST00000565995 SERPINB8P50452 374 aa11.42□□□□□ -0.58
RNF40-208ENST00000565995 CCNG1P51959 295 aa11.42□□□□□ -0.58
RNF40-208ENST00000565995 PSG6Q00889 435 aa11.42□□□□□ -0.58
RNF40-208ENST00000565995 VEZF1Q14119 521 aa11.42□□□□□ -0.58
RNF40-208ENST00000565995 HSP90B2PQ58FF3 399 aa11.42□□□□□ -0.58
RNF40-208ENST00000565995 GGNQ86UU5 652 aa11.42□□□□□ -0.58
RNF40-208ENST00000565995 TDRPQ86YL5 185 aa11.42□□□□□ -0.58
RNF40-208ENST00000565995 CCDC116Q8IYX3 515 aa11.42□□□□□ -0.58
RNF40-208ENST00000565995 SAMD14Q8IZD0 417 aaPredicted RBP11.42□□□□□ -0.58
RNF40-208ENST00000565995 GFM2Q969S9 779 aaKnown RBP11.42□□□□□ -0.58
RNF40-208ENST00000565995 MTBPQ96DY7 904 aa11.42□□□□□ -0.58
RNF40-208ENST00000565995 C1GALT1C1Q96EU7 318 aa11.42□□□□□ -0.58
RNF40-208ENST00000565995 TMEM109Q9BVC6 243 aa11.42□□□□□ -0.58
RNF40-208ENST00000565995 FAIM2Q9BWQ8 316 aa11.42□□□□□ -0.58
RNF40-208ENST00000565995 GRIP2Q9C0E4 1043 aa11.42□□□□□ -0.58
RNF40-208ENST00000565995 SLCO5A1Q9H2Y9 848 aa11.42□□□□□ -0.58
RNF40-208ENST00000565995 PTGES2Q9H7Z7 377 aa11.42□□□□□ -0.58
RNF40-208ENST00000565995 ANKRA2Q9H9E1 313 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms