RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 UQCRBP14927 111 aa3.38□□□□□ -1.87
CHD9-215ENST00000565442 PGAM2P15259 253 aa3.38□□□□□ -1.87
CHD9-215ENST00000565442 DLSTP36957 453 aa3.38□□□□□ -1.87
CHD9-215ENST00000565442 ALDH3B2P48448 385 aa3.38□□□□□ -1.87
CHD9-215ENST00000565442 NAPAP54920 295 aa3.38□□□□□ -1.87
CHD9-215ENST00000565442 NUCB2P80303 420 aa3.38□□□□□ -1.87
CHD9-215ENST00000565442 PUDPQ08623 228 aa3.38□□□□□ -1.87
CHD9-215ENST00000565442 AFTPHQ6ULP2 937 aa3.38□□□□□ -1.87
CHD9-215ENST00000565442 MARCH9Q86YJ5 346 aa3.38□□□□□ -1.87
CHD9-215ENST00000565442 CBWD2Q8IUF1 395 aa3.38□□□□□ -1.87
CHD9-215ENST00000565442 Q8N9G6 341 aaPredicted RBP3.38□□□□□ -1.87
CHD9-215ENST00000565442 STKLD1Q8NE28 680 aa3.38□□□□□ -1.87
CHD9-215ENST00000565442 KLHL30-AS1Q8NEE0 82 aa3.38□□□□□ -1.87
CHD9-215ENST00000565442 PPP1R16AQ96I34 528 aa3.38□□□□□ -1.87
CHD9-215ENST00000565442 TESK2Q96S53 571 aa3.38□□□□□ -1.87
CHD9-215ENST00000565442 NFKBIZQ9BYH8 718 aa3.38□□□□□ -1.87
CHD9-215ENST00000565442 SLC7A10Q9NS82 523 aa3.38□□□□□ -1.87
CHD9-215ENST00000565442 AGPAT5Q9NUQ2 364 aa3.38□□□□□ -1.87
CHD9-215ENST00000565442 SENP1Q9P0U3 644 aa3.38□□□□□ -1.87
CHD9-215ENST00000565442 ABCD2Q9UBJ2 740 aa3.38□□□□□ -1.87
CHD9-215ENST00000565442 ZNF107Q9UII5 783 aaPredicted RBP3.38□□□□□ -1.87
CHD9-215ENST00000565442 DUSP12Q9UNI6 340 aa3.38□□□□□ -1.87
CHD9-215ENST00000565442 AP4B1Q9Y6B7 739 aa3.38□□□□□ -1.87
CHD9-215ENST00000565442 U3KQV3 271 aa3.38□□□□□ -1.87
CHD9-215ENST00000565442 FRG2CA6NGY1 282 aa3.37□□□□□ -1.87
CHD9-215ENST00000565442 CLDN3O15551 220 aa3.37□□□□□ -1.87
CHD9-215ENST00000565442 TSC22D2O75157 780 aa3.37□□□□□ -1.87
CHD9-215ENST00000565442 CALCBP10092 127 aa3.37□□□□□ -1.87
CHD9-215ENST00000565442 XRCC1P18887 633 aaPredicted RBP3.37□□□□□ -1.87
CHD9-215ENST00000565442 TNNI3P19429 210 aa3.37□□□□□ -1.87
CHD9-215ENST00000565442 PTBP1P26599 531 aaKnown RBP eCLIP3.37□□□□□ -1.87
CHD9-215ENST00000565442 IL2RGP31785 369 aa3.37□□□□□ -1.87
CHD9-215ENST00000565442 FNTAP49354 379 aa3.37□□□□□ -1.87
CHD9-215ENST00000565442 NOVA1P51513 510 aaKnown RBP3.37□□□□□ -1.87
CHD9-215ENST00000565442 OSTNP61366 133 aa3.37□□□□□ -1.87
CHD9-215ENST00000565442 CXCL6P80162 114 aa3.37□□□□□ -1.87
CHD9-215ENST00000565442 TMEM52BQ4KMG9 183 aa3.37□□□□□ -1.87
CHD9-215ENST00000565442 CYBRD1Q53TN4 286 aa3.37□□□□□ -1.87
CHD9-215ENST00000565442 DNAJC21Q5F1R6 531 aaKnown RBP3.37□□□□□ -1.87
CHD9-215ENST00000565442 ZNF311Q5JNZ3 666 aa3.37□□□□□ -1.87
CHD9-215ENST00000565442 MARC1Q5VT66 337 aa3.37□□□□□ -1.87
CHD9-215ENST00000565442 MEDAGQ5VYS4 303 aa3.37□□□□□ -1.87
CHD9-215ENST00000565442 ZNF57Q68EA5 555 aaPredicted RBP3.37□□□□□ -1.87
CHD9-215ENST00000565442 SPINK14Q6IE38 97 aa3.37□□□□□ -1.87
CHD9-215ENST00000565442 SULT1C3Q6IMI6 304 aa3.37□□□□□ -1.87
CHD9-215ENST00000565442 NIPAL3Q6P499 406 aa3.37□□□□□ -1.87
CHD9-215ENST00000565442 CYS1Q717R9 158 aa3.37□□□□□ -1.87
CHD9-215ENST00000565442 MCOLN2Q8IZK6 566 aa3.37□□□□□ -1.87
CHD9-215ENST00000565442 TFB1MQ8WVM0 346 aaKnown RBP3.37□□□□□ -1.87
CHD9-215ENST00000565442 GTSF1Q8WW33 167 aa3.37□□□□□ -1.87
CHD9-215ENST00000565442 C18orf25Q96B23 403 aaPredicted RBP3.37□□□□□ -1.87
CHD9-215ENST00000565442 TMEM121Q9BTD3 319 aa3.37□□□□□ -1.87
CHD9-215ENST00000565442 THUMPD2Q9BTF0 503 aaKnown RBP3.37□□□□□ -1.87
CHD9-215ENST00000565442 ZNF416Q9BWM5 594 aa3.37□□□□□ -1.87
CHD9-215ENST00000565442 TM2D1Q9BX74 207 aa3.37□□□□□ -1.87
CHD9-215ENST00000565442 GSDMCQ9BYG8 508 aa3.37□□□□□ -1.87
CHD9-215ENST00000565442 COMMD4Q9H0A8 199 aa3.37□□□□□ -1.87
CHD9-215ENST00000565442 SLC25A51Q9H1U9 297 aa3.37□□□□□ -1.87
CHD9-215ENST00000565442 EXOSC3Q9NQT5 275 aaKnown RBP3.37□□□□□ -1.87
CHD9-215ENST00000565442 RDH8Q9NYR8 311 aa3.37□□□□□ -1.87
CHD9-215ENST00000565442 MFHAS1Q9Y4C4 1052 aa3.37□□□□□ -1.87
CHD9-215ENST00000565442 CCDC7Q96M83 1385 aa3.37□□□□□ -1.87
CHD9-215ENST00000565442 ZSCAN5BA6NJL1 495 aa3.36□□□□□ -1.87
CHD9-215ENST00000565442 FAM74A7A6NL05 159 aa3.36□□□□□ -1.87
CHD9-215ENST00000565442 SLC17A2O00624 439 aa3.36□□□□□ -1.87
CHD9-215ENST00000565442 PHOX2AO14813 284 aa3.36□□□□□ -1.87
CHD9-215ENST00000565442 GPAA1O43292 621 aa3.36□□□□□ -1.87
CHD9-215ENST00000565442 NOL4O94818 638 aa3.36□□□□□ -1.87
CHD9-215ENST00000565442 DESP17661 470 aa3.36□□□□□ -1.87
CHD9-215ENST00000565442 HPDP32754 393 aaPredicted RBP3.36□□□□□ -1.87
CHD9-215ENST00000565442 MDH1P40925 334 aaKnown RBP3.36□□□□□ -1.87
CHD9-215ENST00000565442 EMDP50402 254 aa3.36□□□□□ -1.87
CHD9-215ENST00000565442 ERVPABLB-1P60509 514 aa3.36□□□□□ -1.87
CHD9-215ENST00000565442 SERTAD2Q14140 314 aa3.36□□□□□ -1.87
CHD9-215ENST00000565442 CHI3L2Q15782 390 aa3.36□□□□□ -1.87
CHD9-215ENST00000565442 CAMK4Q16566 473 aa3.36□□□□□ -1.87
CHD9-215ENST00000565442 DCAF4L1Q3SXM0 396 aa3.36□□□□□ -1.87
CHD9-215ENST00000565442 USH1GQ495M9 461 aa3.36□□□□□ -1.87
CHD9-215ENST00000565442 FAM74A3Q4VXF1 159 aa3.36□□□□□ -1.87
CHD9-215ENST00000565442 ASPHD2Q6ICH7 369 aa3.36□□□□□ -1.87
CHD9-215ENST00000565442 VITQ6UXI7 678 aa3.36□□□□□ -1.87
CHD9-215ENST00000565442 TMEM184AQ6ZMB5 413 aa3.36□□□□□ -1.87
CHD9-215ENST00000565442 CENPUQ71F23 418 aa3.36□□□□□ -1.87
CHD9-215ENST00000565442 ZNF573Q86YE8 665 aa3.36□□□□□ -1.87
CHD9-215ENST00000565442 ABCA7Q8IZY2 2146 aa3.36□□□□□ -1.87
CHD9-215ENST00000565442 BPIFB2Q8N4F0 458 aa3.36□□□□□ -1.87
CHD9-215ENST00000565442 CD177Q8N6Q3 437 aa3.36□□□□□ -1.87
CHD9-215ENST00000565442 MRPL13Q9BYD1 178 aaKnown RBP3.36□□□□□ -1.87
CHD9-215ENST00000565442 OPN3Q9H1Y3 402 aaPredicted RBP3.36□□□□□ -1.87
CHD9-215ENST00000565442 MIEF1Q9NQG6 463 aa3.36□□□□□ -1.87
CHD9-215ENST00000565442 B9D1Q9UPM9 204 aa3.36□□□□□ -1.87
CHD9-215ENST00000565442 EIF3LQ9Y262 564 aaKnown RBP3.36□□□□□ -1.87
CHD9-215ENST00000565442 AP1M2Q9Y6Q5 423 aa3.36□□□□□ -1.87
CHD9-215ENST00000565442 USP6P35125 1406 aa3.36□□□□□ -1.87
CHD9-215ENST00000565442 SRSF10O75494 262 aaKnown RBP3.35□□□□□ -1.87
CHD9-215ENST00000565442 STX11O75558 287 aa3.35□□□□□ -1.87
CHD9-215ENST00000565442 DUSP14O95147 198 aaKnown RBP3.35□□□□□ -1.87
CHD9-215ENST00000565442 ANP32DO95626 131 aa3.35□□□□□ -1.87
CHD9-215ENST00000565442 GUCA1CO95843 209 aa3.35□□□□□ -1.87
CHD9-215ENST00000565442 HEXBP07686 556 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms