RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 RPS26P62854 115 aaKnown RBP23.83■■□□□ 1.41
NME3-208ENST00000565379 CPEB4Q17RY0 729 aaKnown RBP eCLIP23.83■■□□□ 1.41
NME3-208ENST00000565379 ZNF468Q5VIY5 522 aaPredicted RBP23.83■■□□□ 1.41
NME3-208ENST00000565379 TNFAIP8L2Q6P589 184 aaPredicted RBP23.83■■□□□ 1.41
NME3-208ENST00000565379 BCORP1Q8N888 145 aa23.83■■□□□ 1.41
NME3-208ENST00000565379 CHDHQ8NE62 594 aaPredicted RBP23.83■■□□□ 1.41
NME3-208ENST00000565379 OR5D16Q8NGK9 328 aa23.83■■□□□ 1.41
NME3-208ENST00000565379 PIK3R3Q92569 461 aa23.83■■□□□ 1.41
NME3-208ENST00000565379 CDS1Q92903 461 aa23.83■■□□□ 1.41
NME3-208ENST00000565379 TMCO6Q96DC7 493 aa23.83■■□□□ 1.41
NME3-208ENST00000565379 AURKBQ96GD4 344 aaPredicted RBP23.83■■□□□ 1.41
NME3-208ENST00000565379 HOPXQ9BPY8 73 aaPredicted RBP23.83■■□□□ 1.41
NME3-208ENST00000565379 CPPED1Q9BRF8 314 aaPredicted RBP23.83■■□□□ 1.41
NME3-208ENST00000565379 IL1RL2Q9HB29 575 aa23.83■■□□□ 1.41
NME3-208ENST00000565379 TMEM247A6NEH6 219 aa23.82■■□□□ 1.4
NME3-208ENST00000565379 ANKUB1A6NFN9 424 aa23.82■■□□□ 1.4
NME3-208ENST00000565379 HS6ST1O60243 411 aa23.82■■□□□ 1.4
NME3-208ENST00000565379 KCNK2O95069 426 aa23.82■■□□□ 1.4
NME3-208ENST00000565379 OR12D1P0DN82 309 aa23.82■■□□□ 1.4
NME3-208ENST00000565379 GNA13Q14344 377 aa23.82■■□□□ 1.4
NME3-208ENST00000565379 DDX59Q5T1V6 619 aaKnown RBP eCLIP23.82■■□□□ 1.4
NME3-208ENST00000565379 ZGRF1Q86YA3 2104 aa23.82■■□□□ 1.4
NME3-208ENST00000565379 MDS2Q8NDY4 140 aa23.82■■□□□ 1.4
NME3-208ENST00000565379 OR4N2Q8NGD1 307 aa23.82■■□□□ 1.4
NME3-208ENST00000565379 PNPT1Q8TCS8 783 aaKnown RBP23.82■■□□□ 1.4
NME3-208ENST00000565379 XAGE5Q8WWM1 108 aa23.82■■□□□ 1.4
NME3-208ENST00000565379 RMND5BQ96G75 393 aaPredicted RBP23.82■■□□□ 1.4
NME3-208ENST00000565379 C5orf34Q96MH7 638 aa23.82■■□□□ 1.4
NME3-208ENST00000565379 POLE3Q9NRF9 147 aa23.82■■□□□ 1.4
NME3-208ENST00000565379 NDE1Q9NXR1 346 aa23.82■■□□□ 1.4
NME3-208ENST00000565379 ANKRD10Q9NXR5 420 aa23.82■■□□□ 1.4
NME3-208ENST00000565379 CNIH4Q9P003 139 aa23.82■■□□□ 1.4
NME3-208ENST00000565379 ERRFI1Q9UJM3 462 aaPredicted RBP23.82■■□□□ 1.4
NME3-208ENST00000565379 GXYLT2A0PJZ3 443 aa23.81■■□□□ 1.4
NME3-208ENST00000565379 HMGN4O00479 90 aa23.81■■□□□ 1.4
NME3-208ENST00000565379 NEURL1O76050 574 aa23.81■■□□□ 1.4
NME3-208ENST00000565379 BMP2P12643 396 aa23.81■■□□□ 1.4
NME3-208ENST00000565379 DSTNP60981 165 aa23.81■■□□□ 1.4
NME3-208ENST00000565379 CBX1P83916 185 aa23.81■■□□□ 1.4
NME3-208ENST00000565379 ARHGAP11BQ3KRB8 267 aa23.81■■□□□ 1.4
NME3-208ENST00000565379 TBCELQ5QJ74 424 aa23.81■■□□□ 1.4
NME3-208ENST00000565379 DCST2Q5T1A1 773 aa23.81■■□□□ 1.4
NME3-208ENST00000565379 HEPHL1Q6MZM0 1159 aa23.81■■□□□ 1.4
NME3-208ENST00000565379 TMEM81Q6P7N7 255 aa23.81■■□□□ 1.4
NME3-208ENST00000565379 C16orf62Q7Z3J2 963 aa23.81■■□□□ 1.4
NME3-208ENST00000565379 PRR22Q8IZ63 422 aa23.81■■□□□ 1.4
NME3-208ENST00000565379 TMEM178AQ8NBL3 297 aa23.81■■□□□ 1.4
NME3-208ENST00000565379 PAQR8Q8TEZ7 354 aa23.81■■□□□ 1.4
NME3-208ENST00000565379 NSL1Q96IY1 281 aa23.81■■□□□ 1.4
NME3-208ENST00000565379 THUMPD3Q9BV44 507 aaKnown RBP23.81■■□□□ 1.4
NME3-208ENST00000565379 ARL8BQ9NVJ2 186 aa23.81■■□□□ 1.4
NME3-208ENST00000565379 P2RX2Q9UBL9 471 aa23.81■■□□□ 1.4
NME3-208ENST00000565379 A1L4Q6 167 aa23.8■■□□□ 1.4
NME3-208ENST00000565379 FXYD1O00168 92 aa23.8■■□□□ 1.4
NME3-208ENST00000565379 SLC25A12O75746 678 aa23.8■■□□□ 1.4
NME3-208ENST00000565379 ESRRAP11474 423 aaPredicted RBP23.8■■□□□ 1.4
NME3-208ENST00000565379 ATP6V1C1P21283 382 aa23.8■■□□□ 1.4
NME3-208ENST00000565379 NUDT2P50583 147 aa23.8■■□□□ 1.4
NME3-208ENST00000565379 COX20Q5RI15 118 aa23.8■■□□□ 1.4
NME3-208ENST00000565379 SLC22A10Q63ZE4 541 aa23.8■■□□□ 1.4
NME3-208ENST00000565379 SPINK14Q6IE38 97 aa23.8■■□□□ 1.4
NME3-208ENST00000565379 SLC25A25Q6KCM7 469 aa23.8■■□□□ 1.4
NME3-208ENST00000565379 NANOGP8Q6NSW7 305 aa23.8■■□□□ 1.4
NME3-208ENST00000565379 METTL25Q8N6Q8 603 aa23.8■■□□□ 1.4
NME3-208ENST00000565379 FAM13CQ8NE31 585 aa23.8■■□□□ 1.4
NME3-208ENST00000565379 OIT3Q8WWZ8 545 aa23.8■■□□□ 1.4
NME3-208ENST00000565379 PMM1Q92871 262 aa23.8■■□□□ 1.4
NME3-208ENST00000565379 HGDQ93099 445 aa23.8■■□□□ 1.4
NME3-208ENST00000565379 TAAR6Q96RI8 345 aa23.8■■□□□ 1.4
NME3-208ENST00000565379 ADOQ96SZ5 270 aa23.8■■□□□ 1.4
NME3-208ENST00000565379 HOXD1Q9GZZ0 328 aa23.8■■□□□ 1.4
NME3-208ENST00000565379 NANOGQ9H9S0 305 aa23.8■■□□□ 1.4
NME3-208ENST00000565379 SH2D2AQ9NP31 389 aa23.8■■□□□ 1.4
NME3-208ENST00000565379 KLF13Q9Y2Y9 288 aaPredicted RBP23.8■■□□□ 1.4
NME3-208ENST00000565379 ANKRD33BA6NCL7 494 aa23.79■■□□□ 1.4
NME3-208ENST00000565379 P04436 131 aa23.79■■□□□ 1.4
NME3-208ENST00000565379 SP1P08047 785 aa23.79■■□□□ 1.4
NME3-208ENST00000565379 CALB2P22676 271 aa23.79■■□□□ 1.4
NME3-208ENST00000565379 CASP9P55211 416 aa23.79■■□□□ 1.4
NME3-208ENST00000565379 FBXW4P57775 412 aa23.79■■□□□ 1.4
NME3-208ENST00000565379 HPCAP84074 193 aa23.79■■□□□ 1.4
NME3-208ENST00000565379 SNTA1Q13424 505 aa23.79■■□□□ 1.4
NME3-208ENST00000565379 CAPRIN1Q14444 709 aaKnown RBP23.79■■□□□ 1.4
NME3-208ENST00000565379 AP1ARQ63HQ0 302 aa23.79■■□□□ 1.4
NME3-208ENST00000565379 PSD4Q8NDX1 1056 aa23.79■■□□□ 1.4
NME3-208ENST00000565379 SPPL2AQ8TCT8 520 aa23.79■■□□□ 1.4
NME3-208ENST00000565379 EFHD2Q96C19 240 aaPredicted RBP23.79■■□□□ 1.4
NME3-208ENST00000565379 OTUB1Q96FW1 271 aaPredicted RBP23.79■■□□□ 1.4
NME3-208ENST00000565379 SCMH1Q96GD3 660 aa23.79■■□□□ 1.4
NME3-208ENST00000565379 SIGLEC12Q96PQ1 595 aa23.79■■□□□ 1.4
NME3-208ENST00000565379 TRNT1Q96Q11 434 aaKnown RBP23.79■■□□□ 1.4
NME3-208ENST00000565379 SPATA9Q9BWV2 254 aa23.79■■□□□ 1.4
NME3-208ENST00000565379 HHATLQ9HCP6 504 aa23.79■■□□□ 1.4
NME3-208ENST00000565379 SACM1LQ9NTJ5 587 aa23.79■■□□□ 1.4
NME3-208ENST00000565379 CALML5Q9NZT1 146 aa23.79■■□□□ 1.4
NME3-208ENST00000565379 DIDO1Q9BTC0 2240 aaKnown RBP23.79■■□□□ 1.4
NME3-208ENST00000565379 UGT2B11O75310 529 aa23.78■■□□□ 1.4
NME3-208ENST00000565379 STX11O75558 287 aa23.78■■□□□ 1.4
NME3-208ENST00000565379 ETFAP13804 333 aa23.78■■□□□ 1.4
NME3-208ENST00000565379 ZNF766Q5HY98 468 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms