RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 YBEYP58557 167 aaPredicted RBP2.82□□□□□ -1.96
PALB2-203ENST00000565038 AP1B1Q10567 949 aa2.82□□□□□ -1.96
PALB2-203ENST00000565038 OR6B2Q6IFH4 312 aa2.82□□□□□ -1.96
PALB2-203ENST00000565038 IGFL2Q6UWQ7 119 aa2.82□□□□□ -1.96
PALB2-203ENST00000565038 PAQR9Q6ZVX9 377 aa2.82□□□□□ -1.96
PALB2-203ENST00000565038 Q7L0L9 218 aa2.82□□□□□ -1.96
PALB2-203ENST00000565038 RABEPKQ7Z6M1 372 aa2.82□□□□□ -1.96
PALB2-203ENST00000565038 ERI1Q8IV48 349 aaKnown RBP2.82□□□□□ -1.96
PALB2-203ENST00000565038 NOL4LQ96MY1 436 aaPredicted RBP2.82□□□□□ -1.96
PALB2-203ENST00000565038 XPO4Q9C0E2 1151 aaKnown RBP2.82□□□□□ -1.96
PALB2-203ENST00000565038 EHD1Q9H4M9 534 aa2.82□□□□□ -1.96
PALB2-203ENST00000565038 THAP9Q9H5L6 903 aa2.82□□□□□ -1.96
PALB2-203ENST00000565038 IL20RAQ9UHF4 553 aa2.82□□□□□ -1.96
PALB2-203ENST00000565038 ZNF490Q9ULM2 529 aaPredicted RBP2.82□□□□□ -1.96
PALB2-203ENST00000565038 ARHGAP42A6NI28 874 aa2.81□□□□□ -1.96
PALB2-203ENST00000565038 SLC9B1P1A6NJY1 282 aa2.81□□□□□ -1.96
PALB2-203ENST00000565038 CASKO14936 926 aa2.81□□□□□ -1.96
PALB2-203ENST00000565038 ALOX15BO15296 676 aa2.81□□□□□ -1.96
PALB2-203ENST00000565038 TM9SF1O15321 606 aa2.81□□□□□ -1.96
PALB2-203ENST00000565038 HTATSF1O43719 755 aaKnown RBP2.81□□□□□ -1.96
PALB2-203ENST00000565038 ZNF861PO60384 105 aa2.81□□□□□ -1.96
PALB2-203ENST00000565038 BCAS2O75934 225 aaPredicted RBP2.81□□□□□ -1.96
PALB2-203ENST00000565038 ANP32DO95626 131 aa2.81□□□□□ -1.96
PALB2-203ENST00000565038 IGLV1-47P01700 117 aa2.81□□□□□ -1.96
PALB2-203ENST00000565038 RBMXP38159 391 aaKnown RBP2.81□□□□□ -1.96
PALB2-203ENST00000565038 ZNF133P52736 654 aaPredicted RBP2.81□□□□□ -1.96
PALB2-203ENST00000565038 WNT4P56705 351 aa2.81□□□□□ -1.96
PALB2-203ENST00000565038 PPP2R5CQ13362 524 aa2.81□□□□□ -1.96
PALB2-203ENST00000565038 KCNJ11Q14654 390 aa2.81□□□□□ -1.96
PALB2-203ENST00000565038 SPATA46Q5T0L3 261 aa2.81□□□□□ -1.96
PALB2-203ENST00000565038 OTPQ5XKR4 325 aa2.81□□□□□ -1.96
PALB2-203ENST00000565038 TMEM179BQ7Z7N9 219 aa2.81□□□□□ -1.96
PALB2-203ENST00000565038 ARNTL2Q8WYA1 636 aa2.81□□□□□ -1.96
PALB2-203ENST00000565038 ADIPOR1Q96A54 375 aa2.81□□□□□ -1.96
PALB2-203ENST00000565038 PLEKHF1Q96S99 279 aa2.81□□□□□ -1.96
PALB2-203ENST00000565038 CCSER1Q9C0I3 900 aa2.81□□□□□ -1.96
PALB2-203ENST00000565038 EHFQ9NZC4 300 aa2.81□□□□□ -1.96
PALB2-203ENST00000565038 ZNF221Q9UK13 617 aa2.81□□□□□ -1.96
PALB2-203ENST00000565038 ABCC9O60706 1549 aa2.81□□□□□ -1.96
PALB2-203ENST00000565038 ANKRD30BQ9BXX2 1392 aa2.8□□□□□ -1.96
PALB2-203ENST00000565038 CFAP73A6NFT4 308 aa2.8□□□□□ -1.96
PALB2-203ENST00000565038 SAGE2PA6NJ88 616 aa2.8□□□□□ -1.96
PALB2-203ENST00000565038 RAMP1O60894 148 aa2.8□□□□□ -1.96
PALB2-203ENST00000565038 SCRG1O75711 98 aa2.8□□□□□ -1.96
PALB2-203ENST00000565038 FUT3P21217 361 aa2.8□□□□□ -1.96
PALB2-203ENST00000565038 PTPN6P29350 595 aa2.8□□□□□ -1.96
PALB2-203ENST00000565038 SFNP31947 248 aa2.8□□□□□ -1.96
PALB2-203ENST00000565038 PSG7Q13046 419 aa2.8□□□□□ -1.96
PALB2-203ENST00000565038 HERPUD1Q15011 391 aa2.8□□□□□ -1.96
PALB2-203ENST00000565038 KARSQ15046 597 aaKnown RBP2.8□□□□□ -1.96
PALB2-203ENST00000565038 CCDC40Q4G0X9 1142 aa2.8□□□□□ -1.96
PALB2-203ENST00000565038 TEX44Q53QW1 395 aa2.8□□□□□ -1.96
PALB2-203ENST00000565038 CYBRD1Q53TN4 286 aa2.8□□□□□ -1.96
PALB2-203ENST00000565038 OR2B11Q5JQS5 317 aa2.8□□□□□ -1.96
PALB2-203ENST00000565038 CXCL17Q6UXB2 119 aa2.8□□□□□ -1.96
PALB2-203ENST00000565038 FRA10AC1Q70Z53 315 aa2.8□□□□□ -1.96
PALB2-203ENST00000565038 MIER3Q7Z3K6 550 aa2.8□□□□□ -1.96
PALB2-203ENST00000565038 BPIFB2Q8N4F0 458 aa2.8□□□□□ -1.96
PALB2-203ENST00000565038 RNF138Q8WVD3 245 aa2.8□□□□□ -1.96
PALB2-203ENST00000565038 PSMG2Q969U7 264 aa2.8□□□□□ -1.96
PALB2-203ENST00000565038 SLC25A36Q96CQ1 311 aa2.8□□□□□ -1.96
PALB2-203ENST00000565038 TMEM80Q96HE8 168 aa2.8□□□□□ -1.96
PALB2-203ENST00000565038 VPS39Q96JC1 886 aa2.8□□□□□ -1.96
PALB2-203ENST00000565038 IL4I1Q96RQ9 567 aa2.8□□□□□ -1.96
PALB2-203ENST00000565038 RUFY1Q96T51 708 aa2.8□□□□□ -1.96
PALB2-203ENST00000565038 KAT8Q9H7Z6 458 aaKnown RBP2.8□□□□□ -1.96
PALB2-203ENST00000565038 PTGES2Q9H7Z7 377 aa2.8□□□□□ -1.96
PALB2-203ENST00000565038 CNOT2Q9NZN8 540 aaKnown RBP2.8□□□□□ -1.96
PALB2-203ENST00000565038 PLA2G4CQ9UP65 541 aa2.8□□□□□ -1.96
PALB2-203ENST00000565038 PPIAL4AQ9Y536 164 aa2.8□□□□□ -1.96
PALB2-203ENST00000565038 ZSCAN5BA6NJL1 495 aa2.79□□□□□ -1.96
PALB2-203ENST00000565038 H3BTX0 84 aa2.79□□□□□ -1.96
PALB2-203ENST00000565038 CD55P08174 381 aa2.79□□□□□ -1.96
PALB2-203ENST00000565038 GSTT2P0CG29 244 aa2.79□□□□□ -1.96
PALB2-203ENST00000565038 GSTT2BP0CG30 244 aa2.79□□□□□ -1.96
PALB2-203ENST00000565038 RALAP11233 206 aa2.79□□□□□ -1.96
PALB2-203ENST00000565038 CCNA2P20248 432 aa2.79□□□□□ -1.96
PALB2-203ENST00000565038 RPL4P36578 427 aaKnown RBP2.79□□□□□ -1.96
PALB2-203ENST00000565038 EMDP50402 254 aa2.79□□□□□ -1.96
PALB2-203ENST00000565038 LIM2P55344 173 aa2.79□□□□□ -1.96
PALB2-203ENST00000565038 FUT7Q11130 342 aa2.79□□□□□ -1.96
PALB2-203ENST00000565038 ZNF154Q13106 437 aa2.79□□□□□ -1.96
PALB2-203ENST00000565038 EIF4EBP2Q13542 120 aaPredicted RBP2.79□□□□□ -1.96
PALB2-203ENST00000565038 SNX1Q13596 522 aa2.79□□□□□ -1.96
PALB2-203ENST00000565038 TFDP1Q14186 410 aa2.79□□□□□ -1.96
PALB2-203ENST00000565038 IL17AQ16552 155 aa2.79□□□□□ -1.96
PALB2-203ENST00000565038 TMEM52BQ4KMG9 183 aa2.79□□□□□ -1.96
PALB2-203ENST00000565038 CELF3Q5SZQ8 465 aaKnown RBP2.79□□□□□ -1.96
PALB2-203ENST00000565038 OLFM4Q6UX06 510 aa2.79□□□□□ -1.96
PALB2-203ENST00000565038 STAC2Q6ZMT1 411 aa2.79□□□□□ -1.96
PALB2-203ENST00000565038 NFAM1Q8NET5 270 aaPredicted RBP2.79□□□□□ -1.96
PALB2-203ENST00000565038 ELSPBP1Q96BH3 223 aa2.79□□□□□ -1.96
PALB2-203ENST00000565038 ZNF799Q96GE5 643 aa2.79□□□□□ -1.96
PALB2-203ENST00000565038 ELMO2Q96JJ3 720 aa2.79□□□□□ -1.96
PALB2-203ENST00000565038 NSMCE2Q96MF7 247 aa2.79□□□□□ -1.96
PALB2-203ENST00000565038 ZNF184Q99676 751 aaPredicted RBP2.79□□□□□ -1.96
PALB2-203ENST00000565038 HES7Q9BYE0 225 aa2.79□□□□□ -1.96
PALB2-203ENST00000565038 TMEM231Q9H6L2 316 aa2.79□□□□□ -1.96
PALB2-203ENST00000565038 TRPV5Q9NQA5 729 aa2.79□□□□□ -1.96
PALB2-203ENST00000565038 P2RX2Q9UBL9 471 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms