RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 BBS10Q8TAM1 723 aa11.93□□□□□ -0.5
SPG7-209ENST00000564047 FAM110BQ8TC76 370 aa11.93□□□□□ -0.5
SPG7-209ENST00000564047 HSPBAP1Q96EW2 488 aa11.93□□□□□ -0.5
SPG7-209ENST00000564047 SDF2Q99470 211 aa11.93□□□□□ -0.5
SPG7-209ENST00000564047 GORASP2Q9H8Y8 452 aa11.93□□□□□ -0.5
SPG7-209ENST00000564047 BCL2L10Q9HD36 194 aa11.93□□□□□ -0.5
SPG7-209ENST00000564047 POLE3Q9NRF9 147 aa11.93□□□□□ -0.5
SPG7-209ENST00000564047 MRTO4Q9UKD2 239 aaKnown RBP11.93□□□□□ -0.5
SPG7-209ENST00000564047 CBLCQ9ULV8 474 aa11.93□□□□□ -0.5
SPG7-209ENST00000564047 SSUH2Q9Y2M2 353 aa11.93□□□□□ -0.5
SPG7-209ENST00000564047 OR10H1Q9Y4A9 318 aa11.93□□□□□ -0.5
SPG7-209ENST00000564047 A0A0G2JPF8 293 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 TMEM200CA6NKL6 621 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 HNRNPCL2B2RXH8 293 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 HNRNPCL3B7ZW38 293 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 H3BNX3 289 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 NKX2-8O15522 239 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 PDE9AO76083 593 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 KCNK2O95069 426 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 PGM3O95394 542 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 BAG2O95816 211 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 CHRM4P08173 479 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 CELA2AP08217 269 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 HNRNPCL4P0DMR1 293 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 NCK1P16333 377 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 KDELR2P33947 212 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 NR0B1P51843 470 aaKnown RBP11.92□□□□□ -0.5
SPG7-209ENST00000564047 POLE2P56282 527 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 PCBP3P57721 371 aaKnown RBP11.92□□□□□ -0.5
SPG7-209ENST00000564047 HPCAP84074 193 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 Q0VFX4 171 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 CHAF1BQ13112 559 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 AIMP2Q13155 320 aaKnown RBP11.92□□□□□ -0.5
SPG7-209ENST00000564047 NNATQ16517 81 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 DECR1Q16698 335 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 CRB2Q5IJ48 1285 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 DCAF10Q5QP82 559 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 JMJD6Q6NYC1 403 aaPredicted RBP11.92□□□□□ -0.5
SPG7-209ENST00000564047 PCSK4Q6UW60 755 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 PATL1Q86TB9 770 aaKnown RBP11.92□□□□□ -0.5
SPG7-209ENST00000564047 TAGAPQ8N103 731 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 ARMC10Q8N2F6 343 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 CATSPER1Q8NEC5 780 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 OR4N2Q8NGD1 307 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 PYDC1Q8WXC3 89 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 FIG4Q92562 907 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 PMM1Q92871 262 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 WBP1Q96G27 269 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 DUS3LQ96G46 650 aaKnown RBP11.92□□□□□ -0.5
SPG7-209ENST00000564047 RMND5BQ96G75 393 aaPredicted RBP11.92□□□□□ -0.5
SPG7-209ENST00000564047 NR1H4Q96RI1 486 aaPredicted RBP11.92□□□□□ -0.5
SPG7-209ENST00000564047 CCNL2Q96S94 520 aaPredicted RBP11.92□□□□□ -0.5
SPG7-209ENST00000564047 TREX2Q9BQ50 279 aaPredicted RBP11.92□□□□□ -0.5
SPG7-209ENST00000564047 G6PC3Q9BUM1 346 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 TRIM15Q9C019 465 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 KLHL4Q9C0H6 718 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 ZNF350Q9GZX5 532 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 SAP130Q9H0E3 1048 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 RUBCNLQ9H714 662 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 ATP13A2Q9NQ11 1180 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 MYOTQ9UBF9 498 aa11.92□□□□□ -0.5
SPG7-209ENST00000564047 DSPPQ9NZW4 1301 aa11.91□□□□□ -0.5
SPG7-209ENST00000564047 B8ZZF3 427 aa11.91□□□□□ -0.5
SPG7-209ENST00000564047 STX11O75558 287 aa11.91□□□□□ -0.5
SPG7-209ENST00000564047 GCM2O75603 506 aaPredicted RBP11.91□□□□□ -0.5
SPG7-209ENST00000564047 H6PDO95479 791 aa11.91□□□□□ -0.5
SPG7-209ENST00000564047 ITGAMP11215 1152 aa11.91□□□□□ -0.5
SPG7-209ENST00000564047 ETS2P15036 469 aa11.91□□□□□ -0.5
SPG7-209ENST00000564047 NAGAP17050 411 aa11.91□□□□□ -0.5
SPG7-209ENST00000564047 ATP6V1B2P21281 511 aa11.91□□□□□ -0.5
SPG7-209ENST00000564047 LCN1P31025 176 aa11.91□□□□□ -0.5
SPG7-209ENST00000564047 PSMD4P55036 377 aaKnown RBP11.91□□□□□ -0.5
SPG7-209ENST00000564047 RRADP55042 308 aa11.91□□□□□ -0.5
SPG7-209ENST00000564047 NRG3P56975 720 aa11.91□□□□□ -0.5
SPG7-209ENST00000564047 ELOAQ14241 798 aaKnown RBP11.91□□□□□ -0.5
SPG7-209ENST00000564047 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.91□□□□□ -0.5
SPG7-209ENST00000564047 MTX3Q5HYI7 312 aa11.91□□□□□ -0.5
SPG7-209ENST00000564047 CCNJQ5T5M9 372 aa11.91□□□□□ -0.5
SPG7-209ENST00000564047 OGFRL1Q5TC84 451 aaPredicted RBP11.91□□□□□ -0.5
SPG7-209ENST00000564047 TYW3Q6IPR3 259 aaKnown RBP11.91□□□□□ -0.5
SPG7-209ENST00000564047 H3F3CQ6NXT2 135 aa11.91□□□□□ -0.5
SPG7-209ENST00000564047 FIGNL1Q6PIW4 674 aa11.91□□□□□ -0.5
SPG7-209ENST00000564047 SLC34A3Q8N130 599 aa11.91□□□□□ -0.5
SPG7-209ENST00000564047 PQLC1Q8N2U9 271 aa11.91□□□□□ -0.5
SPG7-209ENST00000564047 SLC5A8Q8N695 610 aa11.91□□□□□ -0.5
SPG7-209ENST00000564047 SLC15A4Q8N697 577 aa11.91□□□□□ -0.5
SPG7-209ENST00000564047 BCORP1Q8N888 145 aa11.91□□□□□ -0.5
SPG7-209ENST00000564047 TMEM102Q8N9M5 508 aaPredicted RBP11.91□□□□□ -0.5
SPG7-209ENST00000564047 SLC22A8Q8TCC7 542 aa11.91□□□□□ -0.5
SPG7-209ENST00000564047 POP5Q969H6 163 aaKnown RBP11.91□□□□□ -0.5
SPG7-209ENST00000564047 FAM162AQ96A26 154 aa11.91□□□□□ -0.5
SPG7-209ENST00000564047 LRGUKQ96M69 825 aa11.91□□□□□ -0.5
SPG7-209ENST00000564047 NSMCE2Q96MF7 247 aa11.91□□□□□ -0.5
SPG7-209ENST00000564047 SLC38A1Q9H2H9 487 aa11.91□□□□□ -0.5
SPG7-209ENST00000564047 MTHFD2LQ9H903 347 aaPredicted RBP11.91□□□□□ -0.5
SPG7-209ENST00000564047 WDR45Q9Y484 360 aa11.91□□□□□ -0.5
SPG7-209ENST00000564047 TEX15Q9BXT5 2789 aa11.91□□□□□ -0.5
SPG7-209ENST00000564047 USP9XQ93008 2570 aaPredicted RBP11.91□□□□□ -0.5
SPG7-209ENST00000564047 NUP214P35658 2090 aaPredicted RBP11.9□□□□□ -0.5
SPG7-209ENST00000564047 AQP12BA6NM10 295 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms