RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 ZNF180Q9UJW8 692 aa18.82■□□□□ 0.6
HERC2-204ENST00000563945 EMC9Q9Y3B6 208 aa18.82■□□□□ 0.6
HERC2-204ENST00000563945 AP4B1Q9Y6B7 739 aa18.82■□□□□ 0.6
HERC2-204ENST00000563945 HIVEP2P31629 2446 aa18.82■□□□□ 0.6
HERC2-204ENST00000563945 FN1P02751 2386 aaKnown RBP18.81■□□□□ 0.6
HERC2-204ENST00000563945 H0YC42 278 aa18.81■□□□□ 0.6
HERC2-204ENST00000563945 FADS1O60427 444 aa18.81■□□□□ 0.6
HERC2-204ENST00000563945 SLITRK5O94991 958 aa18.81■□□□□ 0.6
HERC2-204ENST00000563945 JUNP05412 331 aaKnown RBP18.81■□□□□ 0.6
HERC2-204ENST00000563945 SUCLG1P53597 346 aaKnown RBP18.81■□□□□ 0.6
HERC2-204ENST00000563945 TPD52P55327 224 aaPredicted RBP18.81■□□□□ 0.6
HERC2-204ENST00000563945 CTBP2P56545 445 aa18.81■□□□□ 0.6
HERC2-204ENST00000563945 CLDN15P56746 228 aa18.81■□□□□ 0.6
HERC2-204ENST00000563945 RAE1P78406 368 aaKnown RBP18.81■□□□□ 0.6
HERC2-204ENST00000563945 PSG6Q00889 435 aa18.81■□□□□ 0.6
HERC2-204ENST00000563945 GLYR1Q49A26 553 aaPredicted RBP18.81■□□□□ 0.6
HERC2-204ENST00000563945 UBAP2Q5T6F2 1119 aaKnown RBP18.81■□□□□ 0.6
HERC2-204ENST00000563945 IFT81Q8WYA0 676 aa18.81■□□□□ 0.6
HERC2-204ENST00000563945 CAVIN3Q969G5 261 aa18.81■□□□□ 0.6
HERC2-204ENST00000563945 TBL1XR1Q9BZK7 514 aa18.81■□□□□ 0.6
HERC2-204ENST00000563945 C3orf14Q9HBI5 128 aa18.81■□□□□ 0.6
HERC2-204ENST00000563945 DDX18Q9NVP1 670 aaKnown RBP18.81■□□□□ 0.6
HERC2-204ENST00000563945 FAM120CQ9NX05 1096 aaKnown RBP18.81■□□□□ 0.6
HERC2-204ENST00000563945 VPS13CQ709C8 3753 aa18.81■□□□□ 0.6
HERC2-204ENST00000563945 DSCAMO60469 2012 aa18.81■□□□□ 0.6
HERC2-204ENST00000563945 A0A087WUV0 522 aaPredicted RBP18.8■□□□□ 0.6
HERC2-204ENST00000563945 A0A087WV62 115 aa18.8■□□□□ 0.6
HERC2-204ENST00000563945 C17orf51A8MQB3 221 aa18.8■□□□□ 0.6
HERC2-204ENST00000563945 CGAP01215 116 aa18.8■□□□□ 0.6
HERC2-204ENST00000563945 ENO1P06733 434 aaKnown RBP18.8■□□□□ 0.6
HERC2-204ENST00000563945 SBK3P0C264 359 aa18.8■□□□□ 0.6
HERC2-204ENST00000563945 PPP3CBP16298 524 aa18.8■□□□□ 0.6
HERC2-204ENST00000563945 DDCP20711 480 aa18.8■□□□□ 0.6
HERC2-204ENST00000563945 NTSP30990 170 aa18.8■□□□□ 0.6
HERC2-204ENST00000563945 PKNOX1P55347 436 aa18.8■□□□□ 0.6
HERC2-204ENST00000563945 CLDN20P56880 219 aa18.8■□□□□ 0.6
HERC2-204ENST00000563945 C17orf67Q0P5P2 114 aa18.8■□□□□ 0.6
HERC2-204ENST00000563945 IMPG1Q17R60 797 aa18.8■□□□□ 0.6
HERC2-204ENST00000563945 BEX5Q5H9J7 111 aa18.8■□□□□ 0.6
HERC2-204ENST00000563945 FAM219BQ5XKK7 198 aa18.8■□□□□ 0.6
HERC2-204ENST00000563945 FAM214BQ7L5A3 538 aa18.8■□□□□ 0.6
HERC2-204ENST00000563945 MARCH3Q86UD3 253 aa18.8■□□□□ 0.6
HERC2-204ENST00000563945 SLC22A9Q8IVM8 553 aa18.8■□□□□ 0.6
HERC2-204ENST00000563945 DCAKDQ8WVC6 231 aa18.8■□□□□ 0.6
HERC2-204ENST00000563945 TMEM171Q8WVE6 324 aa18.8■□□□□ 0.6
HERC2-204ENST00000563945 C1GALT1C1Q96EU7 318 aa18.8■□□□□ 0.6
HERC2-204ENST00000563945 GRID1Q9ULK0 1009 aa18.8■□□□□ 0.6
HERC2-204ENST00000563945 C19orf53Q9UNZ5 99 aaPredicted RBP18.8■□□□□ 0.6
HERC2-204ENST00000563945 TRIM64A6NGJ6 449 aa18.79■□□□□ 0.6
HERC2-204ENST00000563945 TRIM64BA6NI03 449 aa18.79■□□□□ 0.6
HERC2-204ENST00000563945 MYO1GB0I1T2 1018 aa18.79■□□□□ 0.6
HERC2-204ENST00000563945 CNOT4O95628 575 aaKnown RBP18.79■□□□□ 0.6
HERC2-204ENST00000563945 IMPDH1P20839 514 aa18.79■□□□□ 0.6
HERC2-204ENST00000563945 ATP5F1P24539 256 aaPredicted RBP18.79■□□□□ 0.6
HERC2-204ENST00000563945 EIF1AXP47813 144 aaKnown RBP18.79■□□□□ 0.6
HERC2-204ENST00000563945 OCRLQ01968 901 aa18.79■□□□□ 0.6
HERC2-204ENST00000563945 ZNF763Q0D2J5 394 aa18.79■□□□□ 0.6
HERC2-204ENST00000563945 GALNT18Q6P9A2 607 aa18.79■□□□□ 0.6
HERC2-204ENST00000563945 TMEM107Q6UX40 140 aa18.79■□□□□ 0.6
HERC2-204ENST00000563945 TMEM151AQ8N4L1 468 aa18.79■□□□□ 0.6
HERC2-204ENST00000563945 HS3ST6Q96QI5 342 aa18.79■□□□□ 0.6
HERC2-204ENST00000563945 FMO2Q99518 471 aa18.79■□□□□ 0.6
HERC2-204ENST00000563945 GSX2Q9BZM3 304 aa18.79■□□□□ 0.6
HERC2-204ENST00000563945 CXorf56Q9H5V9 222 aa18.79■□□□□ 0.6
HERC2-204ENST00000563945 HHATLQ9HCP6 504 aa18.79■□□□□ 0.6
HERC2-204ENST00000563945 TIMM22Q9Y584 194 aa18.79■□□□□ 0.6
HERC2-204ENST00000563945 TLN2Q9Y4G6 2542 aa18.79■□□□□ 0.6
HERC2-204ENST00000563945 B4DXG7 233 aa18.78■□□□□ 0.6
HERC2-204ENST00000563945 EIF1AYO14602 144 aaKnown RBP18.78■□□□□ 0.6
HERC2-204ENST00000563945 GMFGO60234 142 aa18.78■□□□□ 0.6
HERC2-204ENST00000563945 DLX3O60479 287 aa18.78■□□□□ 0.6
HERC2-204ENST00000563945 KCNH1O95259 989 aa18.78■□□□□ 0.6
HERC2-204ENST00000563945 IL33O95760 270 aa18.78■□□□□ 0.6
HERC2-204ENST00000563945 CCKARP32238 428 aa18.78■□□□□ 0.6
HERC2-204ENST00000563945 PTH2RP49190 550 aa18.78■□□□□ 0.6
HERC2-204ENST00000563945 HTR6P50406 440 aa18.78■□□□□ 0.6
HERC2-204ENST00000563945 LCP2Q13094 533 aa18.78■□□□□ 0.6
HERC2-204ENST00000563945 LCA5Q86VQ0 697 aa18.78■□□□□ 0.6
HERC2-204ENST00000563945 MMGT1Q8N4V1 131 aa18.78■□□□□ 0.6
HERC2-204ENST00000563945 TMEM237Q96Q45 408 aa18.78■□□□□ 0.6
HERC2-204ENST00000563945 TMEM216Q9P0N5 145 aa18.78■□□□□ 0.6
HERC2-204ENST00000563945 CSPG4Q6UVK1 2322 aa18.77■□□□□ 0.6
HERC2-204ENST00000563945 EXOC1LA0A1B0GW35 172 aa18.77■□□□□ 0.6
HERC2-204ENST00000563945 TTC36A6NLP5 189 aa18.77■□□□□ 0.6
HERC2-204ENST00000563945 UTS2O95399 124 aa18.77■□□□□ 0.6
HERC2-204ENST00000563945 SYNGR4O95473 234 aa18.77■□□□□ 0.6
HERC2-204ENST00000563945 ANGPTL1O95841 491 aa18.77■□□□□ 0.6
HERC2-204ENST00000563945 GABRA3P34903 492 aa18.77■□□□□ 0.6
HERC2-204ENST00000563945 NR1H2P55055 460 aa18.77■□□□□ 0.6
HERC2-204ENST00000563945 STK32CQ86UX6 486 aa18.77■□□□□ 0.6
HERC2-204ENST00000563945 METTL25Q8N6Q8 603 aa18.77■□□□□ 0.6
HERC2-204ENST00000563945 OR6K3Q8NGY3 331 aa18.77■□□□□ 0.6
HERC2-204ENST00000563945 PLSCR4Q9NRQ2 329 aa18.77■□□□□ 0.6
HERC2-204ENST00000563945 PAQR5Q9NXK6 330 aaPredicted RBP18.77■□□□□ 0.6
HERC2-204ENST00000563945 FLRT3Q9NZU0 649 aa18.77■□□□□ 0.6
HERC2-204ENST00000563945 MCTS1Q9ULC4 181 aaKnown RBP18.77■□□□□ 0.6
HERC2-204ENST00000563945 ROS1P08922 2347 aa18.76■□□□□ 0.59
HERC2-204ENST00000563945 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.76■□□□□ 0.59
HERC2-204ENST00000563945 UPK1AO00322 258 aa18.76■□□□□ 0.59
HERC2-204ENST00000563945 CRCPO75575 148 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms