RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 HMGCS1Q01581 520 aa14.38□□□□□ -0.11
RNF40-205ENST00000563909 ID2Q02363 134 aa14.38□□□□□ -0.11
RNF40-205ENST00000563909 SPIN4Q56A73 249 aa14.38□□□□□ -0.11
RNF40-205ENST00000563909 FNDC7Q5VTL7 733 aa14.38□□□□□ -0.11
RNF40-205ENST00000563909 BHLHB9Q6PI77 547 aa14.38□□□□□ -0.11
RNF40-205ENST00000563909 ZNF793Q6ZN11 406 aa14.38□□□□□ -0.11
RNF40-205ENST00000563909 ADGRE4PQ86SQ3 457 aa14.38□□□□□ -0.11
RNF40-205ENST00000563909 YRDCQ86U90 279 aaKnown RBP14.38□□□□□ -0.11
RNF40-205ENST00000563909 DDIASQ8IXT1 998 aa14.38□□□□□ -0.11
RNF40-205ENST00000563909 ZCCHC7Q8N3Z6 543 aaKnown RBP14.38□□□□□ -0.11
RNF40-205ENST00000563909 CNEP1R1Q8N9A8 125 aa14.38□□□□□ -0.11
RNF40-205ENST00000563909 CKAP2Q8WWK9 683 aa14.38□□□□□ -0.11
RNF40-205ENST00000563909 METTL2AQ96IZ6 378 aaKnown RBP14.38□□□□□ -0.11
RNF40-205ENST00000563909 MAGEB18Q96M61 343 aa14.38□□□□□ -0.11
RNF40-205ENST00000563909 UCN2Q96RP3 112 aa14.38□□□□□ -0.11
RNF40-205ENST00000563909 MRPL1Q9BYD6 325 aaKnown RBP14.38□□□□□ -0.11
RNF40-205ENST00000563909 SHARPINQ9H0F6 387 aa14.38□□□□□ -0.11
RNF40-205ENST00000563909 LYRM4Q9HD34 91 aa14.38□□□□□ -0.11
RNF40-205ENST00000563909 MAPRE3Q9UPY8 281 aa14.38□□□□□ -0.11
RNF40-205ENST00000563909 SPACA6W5XKT8 324 aa14.38□□□□□ -0.11
RNF40-205ENST00000563909 TMEM233B4DJY2 109 aa14.37□□□□□ -0.11
RNF40-205ENST00000563909 NPIPB8E9PQR5 432 aa14.37□□□□□ -0.11
RNF40-205ENST00000563909 ADAM11O75078 769 aa14.37□□□□□ -0.11
RNF40-205ENST00000563909 SNX4O95219 450 aa14.37□□□□□ -0.11
RNF40-205ENST00000563909 LINC00032P0C843 101 aa14.37□□□□□ -0.11
RNF40-205ENST00000563909 GCKP35557 465 aa14.37□□□□□ -0.11
RNF40-205ENST00000563909 KCNJ5P48544 419 aa14.37□□□□□ -0.11
RNF40-205ENST00000563909 ACSM2AQ08AH3 577 aa14.37□□□□□ -0.11
RNF40-205ENST00000563909 SLAMF1Q13291 335 aa14.37□□□□□ -0.11
RNF40-205ENST00000563909 NTRK2Q16620 822 aa14.37□□□□□ -0.11
RNF40-205ENST00000563909 BEX5Q5H9J7 111 aa14.37□□□□□ -0.11
RNF40-205ENST00000563909 SPDYAQ5MJ70 313 aa14.37□□□□□ -0.11
RNF40-205ENST00000563909 ACSM2BQ68CK6 577 aa14.37□□□□□ -0.11
RNF40-205ENST00000563909 CYP20A1Q6UW02 462 aa14.37□□□□□ -0.11
RNF40-205ENST00000563909 C1orf52Q8N6N3 182 aaKnown RBP14.37□□□□□ -0.11
RNF40-205ENST00000563909 FAM83FQ8NEG4 500 aaPredicted RBP14.37□□□□□ -0.11
RNF40-205ENST00000563909 GAL3ST4Q96RP7 486 aa14.37□□□□□ -0.11
RNF40-205ENST00000563909 MAPKAP1Q9BPZ7 522 aa14.37□□□□□ -0.11
RNF40-205ENST00000563909 G6PC3Q9BUM1 346 aa14.37□□□□□ -0.11
RNF40-205ENST00000563909 SORBS1Q9BX66 1292 aaKnown RBP14.37□□□□□ -0.11
RNF40-205ENST00000563909 ZNF717Q9BY31 904 aaPredicted RBP14.37□□□□□ -0.11
RNF40-205ENST00000563909 OPN3Q9H1Y3 402 aaPredicted RBP14.37□□□□□ -0.11
RNF40-205ENST00000563909 TUBB1Q9H4B7 451 aa14.37□□□□□ -0.11
RNF40-205ENST00000563909 LYARQ9NX58 379 aaKnown RBP14.37□□□□□ -0.11
RNF40-205ENST00000563909 MS4A12Q9NXJ0 267 aa14.37□□□□□ -0.11
RNF40-205ENST00000563909 ELOVL5Q9NYP7 299 aa14.37□□□□□ -0.11
RNF40-205ENST00000563909 CLCF1Q9UBD9 225 aa14.37□□□□□ -0.11
RNF40-205ENST00000563909 A0A0A6YYD5 115 aa14.36□□□□□ -0.11
RNF40-205ENST00000563909 SLCO1B7G3V0H7 640 aa14.36□□□□□ -0.11
RNF40-205ENST00000563909 OVOL3O00110 214 aa14.36□□□□□ -0.11
RNF40-205ENST00000563909 HRKO00198 91 aa14.36□□□□□ -0.11
RNF40-205ENST00000563909 TP53I11O14683 189 aa14.36□□□□□ -0.11
RNF40-205ENST00000563909 PIP5K1BO14986 540 aa14.36□□□□□ -0.11
RNF40-205ENST00000563909 KLF4O43474 513 aa14.36□□□□□ -0.11
RNF40-205ENST00000563909 DYRK3O43781 588 aa14.36□□□□□ -0.11
RNF40-205ENST00000563909 EEDO75530 441 aaKnown RBP14.36□□□□□ -0.11
RNF40-205ENST00000563909 IGKV3-11P04433 115 aa14.36□□□□□ -0.11
RNF40-205ENST00000563909 KLK1P06870 262 aa14.36□□□□□ -0.11
RNF40-205ENST00000563909 PRPH2P23942 346 aa14.36□□□□□ -0.11
RNF40-205ENST00000563909 BTKQ06187 659 aa14.36□□□□□ -0.11
RNF40-205ENST00000563909 CCNYL2Q5T2Q4 361 aa14.36□□□□□ -0.11
RNF40-205ENST00000563909 VWA1Q6PCB0 445 aa14.36□□□□□ -0.11
RNF40-205ENST00000563909 TMEM64Q6YI46 380 aa14.36□□□□□ -0.11
RNF40-205ENST00000563909 COMMD6Q7Z4G1 85 aa14.36□□□□□ -0.11
RNF40-205ENST00000563909 GRAMD2AQ8IUY3 354 aa14.36□□□□□ -0.11
RNF40-205ENST00000563909 C7orf57Q8NEG2 295 aa14.36□□□□□ -0.11
RNF40-205ENST00000563909 FAM76AQ8TAV0 307 aa14.36□□□□□ -0.11
RNF40-205ENST00000563909 GTPBP3Q969Y2 492 aaKnown RBP14.36□□□□□ -0.11
RNF40-205ENST00000563909 APIPQ96GX9 242 aa14.36□□□□□ -0.11
RNF40-205ENST00000563909 C7orf26Q96N11 449 aa14.36□□□□□ -0.11
RNF40-205ENST00000563909 DGAT2Q96PD7 388 aa14.36□□□□□ -0.11
RNF40-205ENST00000563909 PNPOQ9NVS9 261 aa14.36□□□□□ -0.11
RNF40-205ENST00000563909 TMEM160Q9NX00 188 aa14.36□□□□□ -0.11
RNF40-205ENST00000563909 SIRT5Q9NXA8 310 aa14.36□□□□□ -0.11
RNF40-205ENST00000563909 PHF11Q9UIL8 331 aa14.36□□□□□ -0.11
RNF40-205ENST00000563909 CCL27Q9Y4X3 112 aa14.36□□□□□ -0.11
RNF40-205ENST00000563909 MED12LQ86YW9 2145 aa14.36□□□□□ -0.11
RNF40-205ENST00000563909 MED12Q93074 2177 aa14.36□□□□□ -0.11
RNF40-205ENST00000563909 GUCY1B2O75343 617 aa14.35□□□□□ -0.11
RNF40-205ENST00000563909 SKAP2O75563 359 aaPredicted RBP14.35□□□□□ -0.11
RNF40-205ENST00000563909 TGM6O95932 706 aa14.35□□□□□ -0.11
RNF40-205ENST00000563909 FAM58BPP0C7Q3 252 aa14.35□□□□□ -0.11
RNF40-205ENST00000563909 CPN2P22792 545 aa14.35□□□□□ -0.11
RNF40-205ENST00000563909 CHMP24386 653 aa14.35□□□□□ -0.11
RNF40-205ENST00000563909 TLX1P31314 330 aaPredicted RBP14.35□□□□□ -0.11
RNF40-205ENST00000563909 CDKN1AP38936 164 aa14.35□□□□□ -0.11
RNF40-205ENST00000563909 STT3AP46977 705 aa14.35□□□□□ -0.11
RNF40-205ENST00000563909 FBXW4P57775 412 aa14.35□□□□□ -0.11
RNF40-205ENST00000563909 TRA2BP62995 288 aaKnown RBP14.35□□□□□ -0.11
RNF40-205ENST00000563909 MRM1Q6IN84 353 aaKnown RBP14.35□□□□□ -0.11
RNF40-205ENST00000563909 DNM1P46Q6ZS02 220 aa14.35□□□□□ -0.11
RNF40-205ENST00000563909 Q6ZSR9 355 aa14.35□□□□□ -0.11
RNF40-205ENST00000563909 GPR180Q86V85 440 aa14.35□□□□□ -0.11
RNF40-205ENST00000563909 OR4N5Q8IXE1 308 aa14.35□□□□□ -0.11
RNF40-205ENST00000563909 AKAP1Q92667 903 aaKnown RBP eCLIP14.35□□□□□ -0.11
RNF40-205ENST00000563909 PPWD1Q96BP3 646 aaKnown RBP14.35□□□□□ -0.11
RNF40-205ENST00000563909 RBM18Q96H35 190 aaKnown RBP14.35□□□□□ -0.11
RNF40-205ENST00000563909 PPP3R2Q96LZ3 170 aa14.35□□□□□ -0.11
RNF40-205ENST00000563909 C1orf109Q9NX04 203 aa14.35□□□□□ -0.11
RNF40-205ENST00000563909 TEX10Q9NXF1 929 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms