RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 SPPL2AQ8TCT8 520 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 APOBEC4Q8WW27 367 aaKnown RBP9.39□□□□□ -0.91
SMG1-208ENST00000563448 NRG4Q8WWG1 115 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 RASSF5Q8WWW0 418 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 TP53INP1Q96A56 240 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 C7orf34Q96L11 122 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 WFDC6Q9BQY6 131 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 PINK1Q9BXM7 581 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 FAM117AQ9C073 453 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 SEMA6AQ9H2E6 1030 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 IL1RAPQ9NPH3 570 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 AGPAT4Q9NRZ5 378 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 C6orf203Q9P0P8 240 aaPredicted RBP9.39□□□□□ -0.91
SMG1-208ENST00000563448 PCDHGA6Q9Y5G7 932 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 MED13Q9UHV7 2174 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 AGAP5A6NIR3 686 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 hCG_2039718K7EN88 272 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 MASP2O00187 686 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 FABP3P05413 133 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 FASP25445 335 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 EXT1Q16394 746 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 DECR1Q16698 335 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.38□□□□□ -0.91
SMG1-208ENST00000563448 FLYWCH1Q4VC44 716 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 ZNF836Q6ZNA1 936 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 C16orf47Q6ZP98 133 aaPredicted RBP9.38□□□□□ -0.91
SMG1-208ENST00000563448 IL22RA1Q8N6P7 574 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 OR4D11Q8NGI4 311 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 NUBPLQ8TB37 319 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 M1APQ8TC57 530 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 PMM1Q92871 262 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 TMBIM1Q969X1 311 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 EFHD2Q96C19 240 aaPredicted RBP9.38□□□□□ -0.91
SMG1-208ENST00000563448 HSPBAP1Q96EW2 488 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 ZNF354BQ96LW1 612 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 G6PC3Q9BUM1 346 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 AMBRA1Q9C0C7 1298 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 IL17BQ9UHF5 180 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 KCND3Q9UK17 655 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 BAG5Q9UL15 447 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 ABCG2Q9UNQ0 655 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 ZNF443Q9Y2A4 671 aaPredicted RBP9.38□□□□□ -0.91
SMG1-208ENST00000563448 SH3GLB1Q9Y371 365 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 PCDHGA10Q9Y5H3 936 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 AK5Q9Y6K8 562 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 NSG1A0A0A6YYJ2 146 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 NPIPB9F8W1W9 429 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 TSPAN2O60636 221 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 ZNF354AO60765 605 aaPredicted RBP9.38□□□□□ -0.91
SMG1-208ENST00000563448 ZFAND5O76080 213 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 DIRAS1O95057 198 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 IL33O95760 270 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 LGI1O95970 557 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 LIPCP11150 499 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 FCGR1AP12314 374 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 ATP6V1C1P21283 382 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 PRKAR1BP31321 381 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 ATP6AP1Q15904 470 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 LPCAT4Q643R3 524 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 PLAG1Q6DJT9 500 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 DHRS4L2Q6PKH6 230 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 PIWIL3Q7Z3Z3 882 aaKnown RBP9.38□□□□□ -0.91
SMG1-208ENST00000563448 LACC1Q8IV20 430 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 PEX5LQ8IYB4 626 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 SLC34A3Q8N130 599 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 ADAMTS17Q8TE56 1095 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 THAP3Q8WTV1 239 aaPredicted RBP9.38□□□□□ -0.91
SMG1-208ENST00000563448 GEMIN6Q8WXD5 167 aaKnown RBP9.38□□□□□ -0.91
SMG1-208ENST00000563448 PROX1Q92786 737 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 DIO2Q92813 273 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 ZNF160Q9HCG1 818 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 MMP25Q9NPA2 562 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 THSD1Q9NS62 852 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 STOML1Q9UBI4 398 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 KLK13Q9UKR3 277 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 IFT52Q9Y366 437 aa9.38□□□□□ -0.91
SMG1-208ENST00000563448 TRABD2BA6NFA1 517 aa9.37□□□□□ -0.91
SMG1-208ENST00000563448 CLDN24A6NM45 220 aa9.37□□□□□ -0.91
SMG1-208ENST00000563448 CASQ2O14958 399 aaPredicted RBP9.37□□□□□ -0.91
SMG1-208ENST00000563448 ACOX3O15254 700 aa9.37□□□□□ -0.91
SMG1-208ENST00000563448 CLOCKO15516 846 aa9.37□□□□□ -0.91
SMG1-208ENST00000563448 NADKO95544 446 aaPredicted RBP9.37□□□□□ -0.91
SMG1-208ENST00000563448 HPP00738 406 aa9.37□□□□□ -0.91
SMG1-208ENST00000563448 CST1P01037 141 aa9.37□□□□□ -0.91
SMG1-208ENST00000563448 DBIP07108 87 aaKnown RBP9.37□□□□□ -0.91
SMG1-208ENST00000563448 THBS1P07996 1170 aa9.37□□□□□ -0.91
SMG1-208ENST00000563448 IL7RP16871 459 aa9.37□□□□□ -0.91
SMG1-208ENST00000563448 HOXB6P17509 224 aaKnown RBP9.37□□□□□ -0.91
SMG1-208ENST00000563448 GCKP35557 465 aa9.37□□□□□ -0.91
SMG1-208ENST00000563448 PTDSS1P48651 473 aaKnown RBP9.37□□□□□ -0.91
SMG1-208ENST00000563448 EEF1A1P68104 462 aaKnown RBP9.37□□□□□ -0.91
SMG1-208ENST00000563448 FOXC1Q12948 553 aa9.37□□□□□ -0.91
SMG1-208ENST00000563448 ZNF141Q15928 474 aa9.37□□□□□ -0.91
SMG1-208ENST00000563448 DESI1Q6ICB0 168 aa9.37□□□□□ -0.91
SMG1-208ENST00000563448 RBM45Q8IUH3 476 aaKnown RBP9.37□□□□□ -0.91
SMG1-208ENST00000563448 CLIP4Q8N3C7 705 aa9.37□□□□□ -0.91
SMG1-208ENST00000563448 OR5L2Q8NGL0 311 aa9.37□□□□□ -0.91
SMG1-208ENST00000563448 NACC2Q96BF6 587 aa9.37□□□□□ -0.91
SMG1-208ENST00000563448 FAM122AQ96E09 287 aa9.37□□□□□ -0.91
SMG1-208ENST00000563448 OMA1Q96E52 524 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms