RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 ZNF611Q8N823 705 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 NIPA2Q8N8Q9 360 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 ZNF383Q8NA42 475 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 DCAF4L2Q8NA75 395 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 UXS1Q8NBZ7 420 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 ST7LQ8TDW4 575 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 ST6GALNAC6Q969X2 333 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 OTUB1Q96FW1 271 aaPredicted RBP4.3□□□□□ -1.72
LINC00254-201ENST00000563416 WBP1Q96G27 269 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 BSCL2Q96G97 398 aaPredicted RBP4.3□□□□□ -1.72
LINC00254-201ENST00000563416 C5orf30Q96GV9 206 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 SFXN2Q96NB2 322 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 PEBP4Q96S96 227 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 PSMB7Q99436 277 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 CHP1Q99653 195 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 CPNE1Q99829 537 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 FEM1AQ9BSK4 669 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 LMF2Q9BU23 707 aaKnown RBP4.3□□□□□ -1.72
LINC00254-201ENST00000563416 ZYG11BQ9C0D3 744 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 VN1R1Q9GZP7 353 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 THAP2Q9H0W7 228 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 WDR13Q9H1Z4 485 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 RNPEPL1Q9HAU8 725 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 MRPL47Q9HD33 250 aaKnown RBP4.3□□□□□ -1.72
LINC00254-201ENST00000563416 NINJ2Q9NZG7 142 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 OR12D3Q9UGF7 316 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 ERVW-1Q9UQF0 538 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 HS3ST2Q9Y278 367 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 RPH3AQ9Y2J0 694 aaPredicted RBP4.3□□□□□ -1.72
LINC00254-201ENST00000563416 SNX10Q9Y5X0 201 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 AP1M2Q9Y6Q5 423 aa4.3□□□□□ -1.72
LINC00254-201ENST00000563416 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.29□□□□□ -1.72
LINC00254-201ENST00000563416 IGHV1OR15-9A0A0B4J2B8 117 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 A0A1W2PPQ1 181 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 HYKKA2RU49 373 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 GAPDHSO14556 408 aaPredicted RBP4.29□□□□□ -1.72
LINC00254-201ENST00000563416 ATP6V0E1O15342 81 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 XRCC3O43542 346 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 SELENOFO60613 162 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 LRP3O75074 770 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 CRCPO75575 148 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 TRMUO75648 421 aaKnown RBP4.29□□□□□ -1.72
LINC00254-201ENST00000563416 ZMPSTE24O75844 475 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 TRIM16O95361 564 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 NADKO95544 446 aaPredicted RBP4.29□□□□□ -1.72
LINC00254-201ENST00000563416 RHOCP08134 193 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 TPM1P09493 284 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 HLA-EP13747 358 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 TCF4P15884 667 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 VCLP18206 1134 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 EFNA1P20827 205 aaPredicted RBP4.29□□□□□ -1.72
LINC00254-201ENST00000563416 BCKDHBP21953 392 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 PSMA2P25787 234 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 CD27P26842 260 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 MIPP30301 263 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 OR1E1P30953 314 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 GABRA5P31644 462 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 PCK1P35558 622 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 STK19P49842 368 aaPredicted RBP4.29□□□□□ -1.72
LINC00254-201ENST00000563416 SLC25A11Q02978 314 aaKnown RBP4.29□□□□□ -1.72
LINC00254-201ENST00000563416 SULT2A1Q06520 285 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 ZNF177Q13360 481 aaPredicted RBP4.29□□□□□ -1.72
LINC00254-201ENST00000563416 PIGHQ14442 188 aaPredicted RBP4.29□□□□□ -1.72
LINC00254-201ENST00000563416 DPYSL2Q16555 572 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 CA9Q16790 459 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 HNRNPA1L2Q32P51 320 aaKnown RBP4.29□□□□□ -1.72
LINC00254-201ENST00000563416 C14orf177Q52M58 125 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 HSP90AA5PQ58FG0 334 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 SPDYCQ5MJ68 293 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 DCAF10Q5QP82 559 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 CCDC122Q5T0U0 273 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.29□□□□□ -1.72
LINC00254-201ENST00000563416 C9orf64Q5T6V5 341 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 LCE1EQ5T753 118 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 ZC2HC1BQ5TFG8 222 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 COMMD2Q86X83 199 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 PYROXD2Q8N2H3 581 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 OR2AJ1Q8NGZ0 328 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 OR2T3Q8NH03 318 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 NSMAFQ92636 917 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 FAM131CQ96AQ9 280 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 ART5Q96L15 291 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 FAM111AQ96PZ2 611 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 FEVQ99581 238 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 BTBD10Q9BSF8 475 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 SNRNP25Q9BV90 132 aaKnown RBP4.29□□□□□ -1.72
LINC00254-201ENST00000563416 GTPBP2Q9BX10 602 aaKnown RBP4.29□□□□□ -1.72
LINC00254-201ENST00000563416 PITPNM3Q9BZ71 974 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 DPAGT1Q9H3H5 408 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 NHEJ1Q9H9Q4 299 aaPredicted RBP4.29□□□□□ -1.72
LINC00254-201ENST00000563416 FGF22Q9HCT0 170 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 PRSS16Q9NQE7 514 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 ZNHIT6Q9NWK9 470 aaKnown RBP4.29□□□□□ -1.72
LINC00254-201ENST00000563416 SLCO1C1Q9NYB5 712 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 UVRAGQ9P2Y5 699 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 FETUBQ9UGM5 382 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 SUN2Q9UH99 717 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 LCMT1Q9UIC8 334 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 ZDHHC2Q9UIJ5 367 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 ANAPC7Q9UJX3 599 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms