RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 PRODH2Q9UF12 536 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 C3orf18Q9UK00 162 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 ZNF232Q9UNY5 417 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 ZNF318Q5VUA4 2279 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 CNOT3O75175 753 aaKnown RBP16.72■□□□□ 0.27
COMMD4-208ENST00000563220 UGT2B17O75795 530 aa16.72■□□□□ 0.27
COMMD4-208ENST00000563220 SMIM18P0DKX4 95 aa16.72■□□□□ 0.27
COMMD4-208ENST00000563220 EEF1A1P68104 462 aaKnown RBP16.72■□□□□ 0.27
COMMD4-208ENST00000563220 ROR2Q01974 943 aaKnown RBP16.72■□□□□ 0.27
COMMD4-208ENST00000563220 CCDC157Q569K6 752 aa16.72■□□□□ 0.27
COMMD4-208ENST00000563220 COLEC12Q5KU26 742 aa16.72■□□□□ 0.27
COMMD4-208ENST00000563220 FAAH2Q6GMR7 532 aa16.72■□□□□ 0.27
COMMD4-208ENST00000563220 AMER2Q8N7J2 671 aa16.72■□□□□ 0.27
COMMD4-208ENST00000563220 PHF10Q8WUB8 498 aaKnown RBP16.72■□□□□ 0.27
COMMD4-208ENST00000563220 ALPK1Q96QP1 1244 aa16.72■□□□□ 0.27
COMMD4-208ENST00000563220 POLE3Q9NRF9 147 aa16.72■□□□□ 0.27
COMMD4-208ENST00000563220 SLC13A4Q9UKG4 626 aa16.72■□□□□ 0.27
COMMD4-208ENST00000563220 TRBV4-1A0A0J9YWV2 114 aa16.71■□□□□ 0.27
COMMD4-208ENST00000563220 ENO4A6NNW6 628 aa16.71■□□□□ 0.27
COMMD4-208ENST00000563220 MEN1O00255 615 aa16.71■□□□□ 0.27
COMMD4-208ENST00000563220 THBS1P07996 1170 aa16.71■□□□□ 0.27
COMMD4-208ENST00000563220 RNF144AP50876 292 aaPredicted RBP16.71■□□□□ 0.27
COMMD4-208ENST00000563220 RAD23AP54725 363 aa16.71■□□□□ 0.27
COMMD4-208ENST00000563220 HOXC5Q00444 222 aa16.71■□□□□ 0.27
COMMD4-208ENST00000563220 IL1RL1Q01638 556 aa16.71■□□□□ 0.27
COMMD4-208ENST00000563220 LARS2Q15031 903 aaKnown RBP16.71■□□□□ 0.27
COMMD4-208ENST00000563220 RFX4Q33E94 735 aa16.71■□□□□ 0.27
COMMD4-208ENST00000563220 RBM44Q6ZP01 1051 aaKnown RBP16.71■□□□□ 0.27
COMMD4-208ENST00000563220 PIK3C3Q8NEB9 887 aa16.71■□□□□ 0.27
COMMD4-208ENST00000563220 C7orf57Q8NEG2 295 aa16.71■□□□□ 0.27
COMMD4-208ENST00000563220 OR9Q2Q8NGE9 314 aa16.71■□□□□ 0.27
COMMD4-208ENST00000563220 MUS81Q96NY9 551 aa16.71■□□□□ 0.27
COMMD4-208ENST00000563220 MESP1Q9BRJ9 268 aa16.71■□□□□ 0.27
COMMD4-208ENST00000563220 NUDT9Q9BW91 350 aa16.71■□□□□ 0.27
COMMD4-208ENST00000563220 TRIM45Q9H8W5 580 aaPredicted RBP16.71■□□□□ 0.27
COMMD4-208ENST00000563220 Q9N2J8 555 aa16.71■□□□□ 0.27
COMMD4-208ENST00000563220 TMEM9BQ9NQ34 198 aa16.71■□□□□ 0.27
COMMD4-208ENST00000563220 FBXO8Q9NRD0 319 aa16.71■□□□□ 0.27
COMMD4-208ENST00000563220 CTPS2Q9NRF8 586 aa16.71■□□□□ 0.27
COMMD4-208ENST00000563220 SEMA4GQ9NTN9 838 aa16.71■□□□□ 0.27
COMMD4-208ENST00000563220 NINQ8N4C6 2090 aa16.71■□□□□ 0.27
COMMD4-208ENST00000563220 COL5A1P20908 1838 aaPredicted RBP16.71■□□□□ 0.27
COMMD4-208ENST00000563220 VSTM2BA6NLU5 285 aa16.71■□□□□ 0.27
COMMD4-208ENST00000563220 DYRK3O43781 588 aa16.71■□□□□ 0.27
COMMD4-208ENST00000563220 TNFAIP8O95379 198 aa16.71■□□□□ 0.27
COMMD4-208ENST00000563220 DBIP07108 87 aaKnown RBP16.71■□□□□ 0.27
COMMD4-208ENST00000563220 H1F0P07305 194 aaKnown RBP16.71■□□□□ 0.27
COMMD4-208ENST00000563220 CCKBRP32239 447 aa16.71■□□□□ 0.27
COMMD4-208ENST00000563220 EPS8Q12929 822 aa16.71■□□□□ 0.27
COMMD4-208ENST00000563220 SEC23BQ15437 767 aa16.71■□□□□ 0.27
COMMD4-208ENST00000563220 FLYWCH1Q4VC44 716 aa16.71■□□□□ 0.27
COMMD4-208ENST00000563220 KRT80Q6KB66 452 aa16.71■□□□□ 0.27
COMMD4-208ENST00000563220 PMM1Q92871 262 aa16.71■□□□□ 0.27
COMMD4-208ENST00000563220 KIF17Q9P2E2 1029 aa16.71■□□□□ 0.27
COMMD4-208ENST00000563220 CBLCQ9ULV8 474 aa16.71■□□□□ 0.27
COMMD4-208ENST00000563220 ORC6Q9Y5N6 252 aa16.71■□□□□ 0.27
COMMD4-208ENST00000563220 IDSB3KWA1 339 aa16.7■□□□□ 0.26
COMMD4-208ENST00000563220 CPNE3O75131 537 aaKnown RBP16.7■□□□□ 0.26
COMMD4-208ENST00000563220 CCNB2O95067 398 aa16.7■□□□□ 0.26
COMMD4-208ENST00000563220 GUSBP08236 651 aa16.7■□□□□ 0.26
COMMD4-208ENST00000563220 NID1P14543 1247 aa16.7■□□□□ 0.26
COMMD4-208ENST00000563220 ELAVL4P26378 380 aaKnown RBP16.7■□□□□ 0.26
COMMD4-208ENST00000563220 CLDN6P56747 220 aa16.7■□□□□ 0.26
COMMD4-208ENST00000563220 TCF15Q12870 199 aa16.7■□□□□ 0.26
COMMD4-208ENST00000563220 CNPY1Q3B7I2 92 aa16.7■□□□□ 0.26
COMMD4-208ENST00000563220 TTC23Q5W5X9 447 aa16.7■□□□□ 0.26
COMMD4-208ENST00000563220 BCORP1Q8N888 145 aa16.7■□□□□ 0.26
COMMD4-208ENST00000563220 OR14A16Q8NHC5 309 aa16.7■□□□□ 0.26
COMMD4-208ENST00000563220 DAZLQ92904 295 aaKnown RBP16.7■□□□□ 0.26
COMMD4-208ENST00000563220 PRRC1Q96M27 445 aa16.7■□□□□ 0.26
COMMD4-208ENST00000563220 SLC46A1Q96NT5 459 aa16.7■□□□□ 0.26
COMMD4-208ENST00000563220 NIPSNAP1Q9BPW8 284 aa16.7■□□□□ 0.26
COMMD4-208ENST00000563220 FUZQ9BT04 418 aa16.7■□□□□ 0.26
COMMD4-208ENST00000563220 CACYBPQ9HB71 228 aaKnown RBP16.7■□□□□ 0.26
COMMD4-208ENST00000563220 KRT84Q9NSB2 600 aa16.7■□□□□ 0.26
COMMD4-208ENST00000563220 C14orf105Q9NVL8 296 aa16.7■□□□□ 0.26
COMMD4-208ENST00000563220 KLHL28Q9NXS3 571 aa16.7■□□□□ 0.26
COMMD4-208ENST00000563220 IGHV3-20A0A0C4DH32 117 aa16.69■□□□□ 0.26
COMMD4-208ENST00000563220 LOC100130705A0A1B0GUX0 176 aa16.69■□□□□ 0.26
COMMD4-208ENST00000563220 TTC36A6NLP5 189 aa16.69■□□□□ 0.26
COMMD4-208ENST00000563220 C4orf47A7E2U8 309 aa16.69■□□□□ 0.26
COMMD4-208ENST00000563220 BCAS1O75363 584 aaPredicted RBP16.69■□□□□ 0.26
COMMD4-208ENST00000563220 HEXBP07686 556 aa16.69■□□□□ 0.26
COMMD4-208ENST00000563220 ANXA8P13928 327 aa16.69■□□□□ 0.26
COMMD4-208ENST00000563220 RPL5P46777 297 aaKnown RBP16.69■□□□□ 0.26
COMMD4-208ENST00000563220 FGD3Q5JSP0 725 aa16.69■□□□□ 0.26
COMMD4-208ENST00000563220 MRPL2Q5T653 305 aaKnown RBP16.69■□□□□ 0.26
COMMD4-208ENST00000563220 ZNF770Q6IQ21 691 aaPredicted RBP16.69■□□□□ 0.26
COMMD4-208ENST00000563220 TAGAPQ8N103 731 aa16.69■□□□□ 0.26
COMMD4-208ENST00000563220 ZNF555Q8NEP9 628 aa16.69■□□□□ 0.26
COMMD4-208ENST00000563220 LMF1Q96S06 567 aa16.69■□□□□ 0.26
COMMD4-208ENST00000563220 PSD2Q9BQI7 771 aa16.69■□□□□ 0.26
COMMD4-208ENST00000563220 FNDC11Q9BVV2 318 aa16.69■□□□□ 0.26
COMMD4-208ENST00000563220 MRPS26Q9BYN8 205 aaKnown RBP16.69■□□□□ 0.26
COMMD4-208ENST00000563220 RIBC2Q9H4K1 309 aa16.69■□□□□ 0.26
COMMD4-208ENST00000563220 PNPLA3Q9NST1 481 aa16.69■□□□□ 0.26
COMMD4-208ENST00000563220 MAN2C1Q9NTJ4 1040 aa16.69■□□□□ 0.26
COMMD4-208ENST00000563220 NTNG1Q9Y2I2 539 aa16.69■□□□□ 0.26
COMMD4-208ENST00000563220 OR10H1Q9Y4A9 318 aa16.69■□□□□ 0.26
COMMD4-208ENST00000563220 SLC16A6O15403 523 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 160 ms