RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 FRKP42685 505 aaPredicted RBP15.28■□□□□ 0.04
CLK3-210ENST00000563112 KIR2DL3P43628 341 aa15.28■□□□□ 0.04
CLK3-210ENST00000563112 PRR5P85299 388 aa15.28■□□□□ 0.04
CLK3-210ENST00000563112 STX5Q13190 355 aa15.28■□□□□ 0.04
CLK3-210ENST00000563112 GANABQ14697 944 aaKnown RBP15.28■□□□□ 0.04
CLK3-210ENST00000563112 XKR7Q5GH72 579 aa15.28■□□□□ 0.04
CLK3-210ENST00000563112 CHMP1BQ7LBR1 199 aa15.28■□□□□ 0.04
CLK3-210ENST00000563112 TMEM200AQ86VY9 491 aa15.28■□□□□ 0.04
CLK3-210ENST00000563112 NATD1Q8N6N6 113 aa15.28■□□□□ 0.04
CLK3-210ENST00000563112 DUSP19Q8WTR2 217 aa15.28■□□□□ 0.04
CLK3-210ENST00000563112 SLC9A6Q92581 669 aa15.28■□□□□ 0.04
CLK3-210ENST00000563112 WNT2BQ93097 391 aa15.28■□□□□ 0.04
CLK3-210ENST00000563112 RMND5BQ96G75 393 aaPredicted RBP15.28■□□□□ 0.04
CLK3-210ENST00000563112 ZFP3Q96NJ6 502 aa15.28■□□□□ 0.04
CLK3-210ENST00000563112 TBL1XR1Q9BZK7 514 aa15.28■□□□□ 0.04
CLK3-210ENST00000563112 ATP6V1HQ9UI12 483 aa15.28■□□□□ 0.04
CLK3-210ENST00000563112 ZDHHC2Q9UIJ5 367 aa15.28■□□□□ 0.04
CLK3-210ENST00000563112 ITGB1BP2Q9UKP3 347 aa15.28■□□□□ 0.04
CLK3-210ENST00000563112 L3MBTL1Q9Y468 752 aa15.28■□□□□ 0.04
CLK3-210ENST00000563112 DOCK7Q96N67 2140 aa15.28■□□□□ 0.04
CLK3-210ENST00000563112 GXYLT2A0PJZ3 443 aa15.27■□□□□ 0.04
CLK3-210ENST00000563112 LINC01387J3KSC0 135 aa15.27■□□□□ 0.04
CLK3-210ENST00000563112 ZIC3O60481 467 aa15.27■□□□□ 0.04
CLK3-210ENST00000563112 SKAP2O75563 359 aaPredicted RBP15.27■□□□□ 0.04
CLK3-210ENST00000563112 LYPLA1O75608 230 aaPredicted RBP15.27■□□□□ 0.04
CLK3-210ENST00000563112 NKX2-2O95096 273 aa15.27■□□□□ 0.04
CLK3-210ENST00000563112 UTS2O95399 124 aa15.27■□□□□ 0.04
CLK3-210ENST00000563112 IL18BPO95998 194 aa15.27■□□□□ 0.04
CLK3-210ENST00000563112 PEPDP12955 493 aa15.27■□□□□ 0.04
CLK3-210ENST00000563112 ZNF708P17019 499 aa15.27■□□□□ 0.04
CLK3-210ENST00000563112 HK1P19367 917 aa15.27■□□□□ 0.04
CLK3-210ENST00000563112 TCEA1P23193 301 aaKnown RBP15.27■□□□□ 0.04
CLK3-210ENST00000563112 ETV4P43268 484 aa15.27■□□□□ 0.04
CLK3-210ENST00000563112 LHX2P50458 406 aa15.27■□□□□ 0.04
CLK3-210ENST00000563112 C17orf67Q0P5P2 114 aa15.27■□□□□ 0.04
CLK3-210ENST00000563112 BCL2A1Q16548 175 aa15.27■□□□□ 0.04
CLK3-210ENST00000563112 FBXL19-AS1Q494R0 122 aa15.27■□□□□ 0.04
CLK3-210ENST00000563112 C6orf136Q5SQH8 315 aa15.27■□□□□ 0.04
CLK3-210ENST00000563112 ZCCHC12Q6PEW1 402 aa15.27■□□□□ 0.04
CLK3-210ENST00000563112 MARCH3Q86UD3 253 aa15.27■□□□□ 0.04
CLK3-210ENST00000563112 CDH24Q86UP0 819 aa15.27■□□□□ 0.04
CLK3-210ENST00000563112 FADS6Q8N9I5 356 aa15.27■□□□□ 0.04
CLK3-210ENST00000563112 C9orf106Q8NAJ2 232 aa15.27■□□□□ 0.04
CLK3-210ENST00000563112 FNDC5Q8NAU1 212 aa15.27■□□□□ 0.04
CLK3-210ENST00000563112 OR2M3Q8NG83 312 aa15.27■□□□□ 0.04
CLK3-210ENST00000563112 OR6Y1Q8NGX8 325 aa15.27■□□□□ 0.04
CLK3-210ENST00000563112 PIK3R3Q92569 461 aa15.27■□□□□ 0.04
CLK3-210ENST00000563112 MS4A4EQ96PG1 132 aa15.27■□□□□ 0.04
CLK3-210ENST00000563112 PRPF18Q99633 342 aaKnown RBP15.27■□□□□ 0.04
CLK3-210ENST00000563112 ACBD3Q9H3P7 528 aa15.27■□□□□ 0.04
CLK3-210ENST00000563112 ATAD3AQ9NVI7 634 aa15.27■□□□□ 0.04
CLK3-210ENST00000563112 FLRT3Q9NZU0 649 aa15.27■□□□□ 0.04
CLK3-210ENST00000563112 MED11Q9P086 117 aa15.27■□□□□ 0.04
CLK3-210ENST00000563112 NTMQ9P121 344 aa15.27■□□□□ 0.04
CLK3-210ENST00000563112 GIMAP2Q9UG22 337 aa15.27■□□□□ 0.04
CLK3-210ENST00000563112 EIF3LQ9Y262 564 aaKnown RBP15.27■□□□□ 0.04
CLK3-210ENST00000563112 A0A1W2PRB8 838 aa15.26■□□□□ 0.03
CLK3-210ENST00000563112 CLCA1A8K7I4 914 aa15.26■□□□□ 0.03
CLK3-210ENST00000563112 EEF1E1-BLOC1S5C9J1V9 151 aa15.26■□□□□ 0.03
CLK3-210ENST00000563112 SCAMP2O15127 329 aaKnown RBP15.26■□□□□ 0.03
CLK3-210ENST00000563112 EEF1E1O43324 174 aaKnown RBP15.26■□□□□ 0.03
CLK3-210ENST00000563112 HSPA4LO95757 839 aa15.26■□□□□ 0.03
CLK3-210ENST00000563112 TUBBP07437 444 aa15.26■□□□□ 0.03
CLK3-210ENST00000563112 ALOX5P09917 674 aa15.26■□□□□ 0.03
CLK3-210ENST00000563112 SERPINB4P48594 390 aa15.26■□□□□ 0.03
CLK3-210ENST00000563112 PRIM2P49643 509 aa15.26■□□□□ 0.03
CLK3-210ENST00000563112 AGFG1P52594 562 aaKnown RBP15.26■□□□□ 0.03
CLK3-210ENST00000563112 CLDN18P56856 261 aa15.26■□□□□ 0.03
CLK3-210ENST00000563112 EEFSECP57772 596 aaKnown RBP15.26■□□□□ 0.03
CLK3-210ENST00000563112 EEF1A1P68104 462 aaKnown RBP15.26■□□□□ 0.03
CLK3-210ENST00000563112 ZNF844Q08AG5 666 aa15.26■□□□□ 0.03
CLK3-210ENST00000563112 MAD2L1Q13257 205 aaPredicted RBP15.26■□□□□ 0.03
CLK3-210ENST00000563112 MLC1Q15049 377 aa15.26■□□□□ 0.03
CLK3-210ENST00000563112 CPTPQ5TA50 214 aa15.26■□□□□ 0.03
CLK3-210ENST00000563112 EEF1A1P5Q5VTE0 462 aa15.26■□□□□ 0.03
CLK3-210ENST00000563112 IL23RQ5VWK5 629 aa15.26■□□□□ 0.03
CLK3-210ENST00000563112 RAET1LQ5VY80 246 aa15.26■□□□□ 0.03
CLK3-210ENST00000563112 POMZP3Q6PJE2 187 aa15.26■□□□□ 0.03
CLK3-210ENST00000563112 CROCCP2Q86T23 111 aa15.26■□□□□ 0.03
CLK3-210ENST00000563112 KIF18BQ86Y91 864 aa15.26■□□□□ 0.03
CLK3-210ENST00000563112 GRAMD2AQ8IUY3 354 aa15.26■□□□□ 0.03
CLK3-210ENST00000563112 ZZZ3Q8IYH5 903 aa15.26■□□□□ 0.03
CLK3-210ENST00000563112 MEIOBQ8N635 442 aa15.26■□□□□ 0.03
CLK3-210ENST00000563112 GOT1L1Q8NHS2 421 aaPredicted RBP15.26■□□□□ 0.03
CLK3-210ENST00000563112 HOXB13Q92826 284 aaPredicted RBP15.26■□□□□ 0.03
CLK3-210ENST00000563112 TUBGCP3Q96CW5 907 aa15.26■□□□□ 0.03
CLK3-210ENST00000563112 UCN2Q96RP3 112 aa15.26■□□□□ 0.03
CLK3-210ENST00000563112 SH3GL2Q99962 352 aa15.26■□□□□ 0.03
CLK3-210ENST00000563112 C1orf50Q9BV19 199 aa15.26■□□□□ 0.03
CLK3-210ENST00000563112 CENPHQ9H3R5 247 aa15.26■□□□□ 0.03
CLK3-210ENST00000563112 SSU72Q9NP77 194 aaKnown RBP15.26■□□□□ 0.03
CLK3-210ENST00000563112 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.25■□□□□ 0.03
CLK3-210ENST00000563112 WDR91A4D1P6 747 aa15.25■□□□□ 0.03
CLK3-210ENST00000563112 BIRC5O15392 142 aa15.25■□□□□ 0.03
CLK3-210ENST00000563112 RCBTB2O95199 551 aa15.25■□□□□ 0.03
CLK3-210ENST00000563112 ANGPTL1O95841 491 aa15.25■□□□□ 0.03
CLK3-210ENST00000563112 POU3F2P20265 443 aaPredicted RBP15.25■□□□□ 0.03
CLK3-210ENST00000563112 EFNA1P20827 205 aaPredicted RBP15.25■□□□□ 0.03
CLK3-210ENST00000563112 LCN1P31025 176 aa15.25■□□□□ 0.03
CLK3-210ENST00000563112 ARRB2P32121 409 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms