RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 H0Y3Z8 333 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 GOLGA8RI6L899 631 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 E2F3O00716 465 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 NVLO15381 856 aaKnown RBP4.25□□□□□ -1.73
SMG1-206ENST00000562668 P2RX6O15547 441 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 TYROBPO43914 113 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 LCMT2O60294 686 aaKnown RBP4.25□□□□□ -1.73
SMG1-206ENST00000562668 SIX3O95343 332 aaPredicted RBP4.25□□□□□ -1.73
SMG1-206ENST00000562668 GUCA1CO95843 209 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 CH25HO95992 272 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 CAPN1P07384 714 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 SP1P08047 785 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 GSTA1P08263 222 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 RPS17P08708 135 aaKnown RBP4.25□□□□□ -1.73
SMG1-206ENST00000562668 ANXA5P08758 320 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 CSF1P09603 554 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 HIST1H2AGP0C0S8 130 aaPredicted RBP4.25□□□□□ -1.73
SMG1-206ENST00000562668 CD22P20273 847 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 HIST1H2ADP20671 130 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 ITGAXP20702 1163 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 CDH3P22223 829 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 RORAP35398 523 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 RPL3P39023 403 aaKnown RBP4.25□□□□□ -1.73
SMG1-206ENST00000562668 CASP2P42575 452 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 MTNR1AP48039 350 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 HNMTP50135 292 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 MVDP53602 400 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 CSNK1G2P78368 415 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 ACSM2AQ08AH3 577 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 FAM27E3Q08E93 113 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 PRKAA1Q13131 559 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 BIRC2Q13490 618 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 NAE1Q13564 534 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 CASP8Q14790 479 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 FAM83EQ2M2I3 478 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 TAF1BQ53T94 588 aaPredicted RBP4.25□□□□□ -1.73
SMG1-206ENST00000562668 CES4AQ5XG92 561 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 FAM219BQ5XKK7 198 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 PWWP2BQ6NUJ5 590 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 TTC23LQ6PF05 361 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 FIGLAQ6QHK4 219 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 RAPH1Q70E73 1250 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 TAOK1Q7L7X3 1001 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 VN1R4Q7Z5H5 301 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 TBC1D1Q86TI0 1168 aaPredicted RBP4.25□□□□□ -1.73
SMG1-206ENST00000562668 EXOC3L1Q86VI1 746 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 LCA5Q86VQ0 697 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 THOC6Q86W42 341 aaKnown RBP4.25□□□□□ -1.73
SMG1-206ENST00000562668 MYLK4Q86YV6 388 aaPredicted RBP4.25□□□□□ -1.73
SMG1-206ENST00000562668 C4orf33Q8N1A6 199 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 RIBC1Q8N443 379 aaPredicted RBP4.25□□□□□ -1.73
SMG1-206ENST00000562668 FBXO39Q8N4B4 442 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 ZNF114Q8NC26 417 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 ZNF740Q8NDX6 193 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 OR4N2Q8NGD1 307 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 OR6Y1Q8NGX8 325 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 NEIL2Q969S2 332 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 ZUFSPQ96AP4 578 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 SLC22A18Q96BI1 424 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 TLCD1Q96CP7 247 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 TM4SF19Q96DZ7 209 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 MOCOSQ96EN8 888 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 CABS1Q96KC9 395 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 CMKLR1Q99788 373 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 CTRCQ99895 268 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 CCDC77Q9BR77 488 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 H2AFJQ9BTM1 129 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 DPH7Q9BTV6 452 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 ACAT2Q9BWD1 397 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 STRADBQ9C0K7 418 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 AKIRIN1Q9H9L7 192 aaPredicted RBP4.25□□□□□ -1.73
SMG1-206ENST00000562668 PLEKHA2Q9HB19 425 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 CCDC177Q9NQR7 707 aaPredicted RBP4.25□□□□□ -1.73
SMG1-206ENST00000562668 FGF21Q9NSA1 209 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 ZNF446Q9NWS9 450 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 ANKMY1Q9P2S6 941 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 PISDQ9UG56 409 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 TAC3Q9UHF0 121 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 LNPEPQ9UIQ6 1025 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 ZNF225Q9UK10 706 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 ZNF490Q9ULM2 529 aaPredicted RBP4.25□□□□□ -1.73
SMG1-206ENST00000562668 SLC22A14Q9Y267 594 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 TMEM184BQ9Y519 407 aaPredicted RBP4.25□□□□□ -1.73
SMG1-206ENST00000562668 IKBKGQ9Y6K9 419 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 NUP210LQ5VU65 1888 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 BSNQ9UPA5 3926 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 KCNE1BA0A087WTH5 132 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 FEZF1A0PJY2 475 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 NCF1BA6NI72 391 aaPredicted RBP4.24□□□□□ -1.73
SMG1-206ENST00000562668 SMIM23A6NLE4 172 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 NCF1CA8MVU1 366 aaPredicted RBP4.24□□□□□ -1.73
SMG1-206ENST00000562668 C4orf51C9J302 202 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 E7EQ34 232 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 H0YGG7 62 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 STX16-NPEPL1H3BU86 382 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 K7EPI3 171 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 OR7A17O14581 309 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 STX16O14662 325 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 HAT1O14929 419 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 PLIN3O60664 434 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms