RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 IL11P20809 199 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 CPN2P22792 545 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 ABCD3P28288 659 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 HPDP32754 393 aaPredicted RBP4.67□□□□□ -1.66
HERC1-213ENST00000561359 PTGDSP41222 190 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 SLC6A8P48029 635 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 SUCLG1P53597 346 aaKnown RBP4.67□□□□□ -1.66
HERC1-213ENST00000561359 SLURP1P55000 103 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 CLDN15P56746 228 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 CLDN20P56880 219 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 UBE2HP62256 183 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 PHC1P78364 1004 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 IL13RA1P78552 427 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 CRADDP78560 199 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 MYL5Q02045 173 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 TGM3Q08188 693 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 KLF1Q13351 362 aaPredicted RBP4.67□□□□□ -1.66
HERC1-213ENST00000561359 SNTA1Q13424 505 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 CCNIQ14094 377 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 ACAP2Q15057 778 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 PPA1Q15181 289 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 OR5M10Q6IEU7 315 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 UGT2A3Q6UWM9 527 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 Q6ZPA2 131 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 CPNE9Q8IYJ1 553 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 KATNAL2Q8IYT4 538 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 BPIFB2Q8N4F0 458 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 ZDHHC22Q8N966 263 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 TTLQ8NG68 377 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 OR2L5Q8NG80 312 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 OR56A3Q8NH54 315 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 RIT1Q92963 219 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 ZBTB8AQ96BR9 441 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 NODALQ96S42 347 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 GPR21Q99679 349 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 SLC6A7Q99884 636 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 POTEKPQ9BYX7 375 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 SLITRK2Q9H156 845 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 PELI2Q9HAT8 420 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 GRPEL1Q9HAV7 217 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 LYRM4Q9HD34 91 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 MYOZ1Q9NP98 299 aaPredicted RBP4.67□□□□□ -1.66
HERC1-213ENST00000561359 HIF1ANQ9NWT6 349 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 SYBUQ9NX95 663 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 EHD3Q9NZN3 535 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 KLHL42Q9P2K6 505 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 DHRS7Q9Y394 339 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 GRIP1Q9Y3R0 1128 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 SPEF1Q9Y4P9 236 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 PPIAL4AQ9Y536 164 aa4.67□□□□□ -1.66
HERC1-213ENST00000561359 EPPK1P58107 5090 aaKnown RBP4.66□□□□□ -1.66
HERC1-213ENST00000561359 ANKDD1BA6NHY2 528 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 ERI2A8K979 691 aaKnown RBP4.66□□□□□ -1.66
HERC1-213ENST00000561359 B4DSR2 109 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 H3BML4 177 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 M0QZ24 198 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 SCAMP2O15127 329 aaKnown RBP4.66□□□□□ -1.66
HERC1-213ENST00000561359 PJA2O43164 708 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 SHOX2O60902 331 aaPredicted RBP4.66□□□□□ -1.66
HERC1-213ENST00000561359 SS18L1O75177 396 aaPredicted RBP4.66□□□□□ -1.66
HERC1-213ENST00000561359 H2AFYO75367 372 aaKnown RBP4.66□□□□□ -1.66
HERC1-213ENST00000561359 GCM2O75603 506 aaPredicted RBP4.66□□□□□ -1.66
HERC1-213ENST00000561359 PDE5AO76074 875 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 NTN1O95631 604 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 ADAP00813 363 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 TUBBP07437 444 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 DHRS4L1P0CG22 281 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 FPR2P25090 351 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 NMBRP28336 390 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 GCH1P30793 250 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 BUD31P41223 144 aaPredicted RBP4.66□□□□□ -1.66
HERC1-213ENST00000561359 MARCKSL1P49006 195 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 SESN2P58004 480 aaPredicted RBP4.66□□□□□ -1.66
HERC1-213ENST00000561359 B3GALT5-AS1P59052 145 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 IGLV3-21P80748 117 aaPredicted RBP4.66□□□□□ -1.66
HERC1-213ENST00000561359 BIKQ13323 160 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 SP140Q13342 867 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 NNATQ16517 81 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 ZSWIM7Q19AV6 140 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 PCID2Q5JVF3 399 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 ZNF544Q6NX49 715 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 FAHD2BQ6P2I3 314 aaPredicted RBP4.66□□□□□ -1.66
HERC1-213ENST00000561359 TMEM81Q6P7N7 255 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 SASS6Q6UVJ0 657 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 CES3Q6UWW8 571 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 TMEM108Q6UXF1 575 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 TMIGD1Q6UXZ0 262 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 ETV3LQ6ZN32 361 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 Q6ZSR9 355 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 BHLHA15Q7RTS1 189 aaPredicted RBP4.66□□□□□ -1.66
HERC1-213ENST00000561359 NUP54Q7Z3B4 507 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 EXOC3L1Q86VI1 746 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 RHOT2Q8IXI1 618 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 PPIL6Q8IXY8 311 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 ST13P4Q8IZP2 240 aaPredicted RBP4.66□□□□□ -1.66
HERC1-213ENST00000561359 GABRG1Q8N1C3 465 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 SPATA6LQ8N4H0 392 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 TEX29Q8N6K0 151 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 BBOF1Q8ND07 529 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 OR4K17Q8NGC6 315 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms