RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 BCKDKO14874 412 aa15.87■□□□□ 0.13
HDDC3-206ENST00000561036 POLR1CO15160 346 aaPredicted RBP15.87■□□□□ 0.13
HDDC3-206ENST00000561036 MITFO75030 526 aaPredicted RBP15.87■□□□□ 0.13
HDDC3-206ENST00000561036 CPNE3O75131 537 aaKnown RBP15.87■□□□□ 0.13
HDDC3-206ENST00000561036 TIAF1O95411 115 aa15.87■□□□□ 0.13
HDDC3-206ENST00000561036 ADAP00813 363 aa15.87■□□□□ 0.13
HDDC3-206ENST00000561036 ZGLP1P0C6A0 271 aa15.87■□□□□ 0.13
HDDC3-206ENST00000561036 CCNYL3P0C7X3 344 aa15.87■□□□□ 0.13
HDDC3-206ENST00000561036 CD59P13987 128 aa15.87■□□□□ 0.13
HDDC3-206ENST00000561036 ELAVL4P26378 380 aaKnown RBP15.87■□□□□ 0.13
HDDC3-206ENST00000561036 TSPAN7P41732 249 aa15.87■□□□□ 0.13
HDDC3-206ENST00000561036 PPICP45877 212 aa15.87■□□□□ 0.13
HDDC3-206ENST00000561036 E2F1Q01094 437 aa15.87■□□□□ 0.13
HDDC3-206ENST00000561036 ILKQ13418 452 aa15.87■□□□□ 0.13
HDDC3-206ENST00000561036 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.87■□□□□ 0.13
HDDC3-206ENST00000561036 FLYWCH1Q4VC44 716 aa15.87■□□□□ 0.13
HDDC3-206ENST00000561036 FGD3Q5JSP0 725 aa15.87■□□□□ 0.13
HDDC3-206ENST00000561036 ZNF691Q5VV52 312 aa15.87■□□□□ 0.13
HDDC3-206ENST00000561036 ZNF770Q6IQ21 691 aaPredicted RBP15.87■□□□□ 0.13
HDDC3-206ENST00000561036 B3GNT8Q7Z7M8 397 aa15.87■□□□□ 0.13
HDDC3-206ENST00000561036 GALNT5Q7Z7M9 940 aa15.87■□□□□ 0.13
HDDC3-206ENST00000561036 HMGN2P46Q86SG4 172 aa15.87■□□□□ 0.13
HDDC3-206ENST00000561036 PARP8Q8N3A8 854 aa15.87■□□□□ 0.13
HDDC3-206ENST00000561036 CLIP4Q8N3C7 705 aa15.87■□□□□ 0.13
HDDC3-206ENST00000561036 SLC2A12Q8TD20 617 aa15.87■□□□□ 0.13
HDDC3-206ENST00000561036 LRFN5Q96NI6 719 aa15.87■□□□□ 0.13
HDDC3-206ENST00000561036 SLC26A1Q9H2B4 701 aa15.87■□□□□ 0.13
HDDC3-206ENST00000561036 RIBC2Q9H4K1 309 aa15.87■□□□□ 0.13
HDDC3-206ENST00000561036 RXFP3Q9NSD7 469 aa15.87■□□□□ 0.13
HDDC3-206ENST00000561036 FBXO34Q9NWN3 711 aa15.87■□□□□ 0.13
HDDC3-206ENST00000561036 AKAP7Q9P0M2 348 aaPredicted RBP15.87■□□□□ 0.13
HDDC3-206ENST00000561036 RHCGQ9UBD6 479 aa15.87■□□□□ 0.13
HDDC3-206ENST00000561036 CCDC88CQ9P219 2028 aa15.87■□□□□ 0.13
HDDC3-206ENST00000561036 TRBV4-1A0A0J9YWV2 114 aa15.86■□□□□ 0.13
HDDC3-206ENST00000561036 SH3PXD2BA1X283 911 aa15.86■□□□□ 0.13
HDDC3-206ENST00000561036 CDHR4A6H8M9 788 aa15.86■□□□□ 0.13
HDDC3-206ENST00000561036 TRIM64A6NGJ6 449 aa15.86■□□□□ 0.13
HDDC3-206ENST00000561036 PRR33A8MZF0 331 aa15.86■□□□□ 0.13
HDDC3-206ENST00000561036 NPIPB9F8W1W9 429 aa15.86■□□□□ 0.13
HDDC3-206ENST00000561036 CDX4O14627 284 aaPredicted RBP15.86■□□□□ 0.13
HDDC3-206ENST00000561036 FMO6PO60774 539 aa15.86■□□□□ 0.13
HDDC3-206ENST00000561036 OR5F1O95221 314 aa15.86■□□□□ 0.13
HDDC3-206ENST00000561036 AGXTP21549 392 aa15.86■□□□□ 0.13
HDDC3-206ENST00000561036 DRD5P21918 477 aa15.86■□□□□ 0.13
HDDC3-206ENST00000561036 LCN1P31025 176 aa15.86■□□□□ 0.13
HDDC3-206ENST00000561036 TPD52P55327 224 aaPredicted RBP15.86■□□□□ 0.13
HDDC3-206ENST00000561036 TAS2R41P59536 307 aa15.86■□□□□ 0.13
HDDC3-206ENST00000561036 PSPHP78330 225 aa15.86■□□□□ 0.13
HDDC3-206ENST00000561036 NPRL3Q12980 569 aa15.86■□□□□ 0.13
HDDC3-206ENST00000561036 PIN1Q13526 163 aaPredicted RBP15.86■□□□□ 0.13
HDDC3-206ENST00000561036 ZNF141Q15928 474 aa15.86■□□□□ 0.13
HDDC3-206ENST00000561036 MAPK14Q16539 360 aa15.86■□□□□ 0.13
HDDC3-206ENST00000561036 RBM44Q6ZP01 1051 aaKnown RBP15.86■□□□□ 0.13
HDDC3-206ENST00000561036 RANBP3LQ86VV4 465 aaPredicted RBP15.86■□□□□ 0.13
HDDC3-206ENST00000561036 CMIPQ8IY22 773 aa15.86■□□□□ 0.13
HDDC3-206ENST00000561036 ZNF721Q8TF20 911 aa15.86■□□□□ 0.13
HDDC3-206ENST00000561036 PITX2Q99697 317 aa15.86■□□□□ 0.13
HDDC3-206ENST00000561036 CDC6Q99741 560 aa15.86■□□□□ 0.13
HDDC3-206ENST00000561036 APOL4Q9BPW4 351 aa15.86■□□□□ 0.13
HDDC3-206ENST00000561036 DGCR6LQ9BY27 220 aa15.86■□□□□ 0.13
HDDC3-206ENST00000561036 ITPAQ9BY32 194 aa15.86■□□□□ 0.13
HDDC3-206ENST00000561036 MRPS26Q9BYN8 205 aaKnown RBP15.86■□□□□ 0.13
HDDC3-206ENST00000561036 HOXD1Q9GZZ0 328 aa15.86■□□□□ 0.13
HDDC3-206ENST00000561036 ING2Q9H160 280 aa15.86■□□□□ 0.13
HDDC3-206ENST00000561036 NDRG4Q9ULP0 352 aaKnown RBP15.86■□□□□ 0.13
HDDC3-206ENST00000561036 CBLCQ9ULV8 474 aa15.86■□□□□ 0.13
HDDC3-206ENST00000561036 DTX4Q9Y2E6 619 aa15.86■□□□□ 0.13
HDDC3-206ENST00000561036 OR10H1Q9Y4A9 318 aa15.86■□□□□ 0.13
HDDC3-206ENST00000561036 FAM86C2PA6NEL3 165 aa15.85■□□□□ 0.13
HDDC3-206ENST00000561036 FRG2CA6NGY1 282 aa15.85■□□□□ 0.13
HDDC3-206ENST00000561036 A6NHS1 94 aa15.85■□□□□ 0.13
HDDC3-206ENST00000561036 EIF4E1BA6NMX2 242 aaKnown RBP15.85■□□□□ 0.13
HDDC3-206ENST00000561036 CLIC3O95833 236 aa15.85■□□□□ 0.13
HDDC3-206ENST00000561036 HEXBP07686 556 aa15.85■□□□□ 0.13
HDDC3-206ENST00000561036 GTF2A1P52655 376 aaPredicted RBP15.85■□□□□ 0.13
HDDC3-206ENST00000561036 EFNA3P52797 238 aa15.85■□□□□ 0.13
HDDC3-206ENST00000561036 IL1RL1Q01638 556 aa15.85■□□□□ 0.13
HDDC3-206ENST00000561036 ST3GAL3Q11203 375 aa15.85■□□□□ 0.13
HDDC3-206ENST00000561036 TRAM2Q15035 370 aa15.85■□□□□ 0.13
HDDC3-206ENST00000561036 DECR1Q16698 335 aa15.85■□□□□ 0.13
HDDC3-206ENST00000561036 MRPL2Q5T653 305 aaKnown RBP15.85■□□□□ 0.13
HDDC3-206ENST00000561036 LAPTM4BQ86VI4 370 aa15.85■□□□□ 0.13
HDDC3-206ENST00000561036 TSPYL5Q86VY4 417 aaPredicted RBP15.85■□□□□ 0.13
HDDC3-206ENST00000561036 GRAMD2AQ8IUY3 354 aa15.85■□□□□ 0.13
HDDC3-206ENST00000561036 NAXDQ8IW45 347 aa15.85■□□□□ 0.13
HDDC3-206ENST00000561036 ZNF786Q8N393 782 aa15.85■□□□□ 0.13
HDDC3-206ENST00000561036 BCORP1Q8N888 145 aa15.85■□□□□ 0.13
HDDC3-206ENST00000561036 AQP11Q8NBQ7 271 aa15.85■□□□□ 0.13
HDDC3-206ENST00000561036 OR1N1Q8NGS0 311 aa15.85■□□□□ 0.13
HDDC3-206ENST00000561036 FBLIM1Q8WUP2 373 aa15.85■□□□□ 0.13
HDDC3-206ENST00000561036 DIO2Q92813 273 aa15.85■□□□□ 0.13
HDDC3-206ENST00000561036 ATOH1Q92858 354 aaPredicted RBP15.85■□□□□ 0.13
HDDC3-206ENST00000561036 MCHR1Q99705 422 aa15.85■□□□□ 0.13
HDDC3-206ENST00000561036 OR8D2Q9GZM6 311 aa15.85■□□□□ 0.13
HDDC3-206ENST00000561036 APMAPQ9HDC9 416 aa15.85■□□□□ 0.13
HDDC3-206ENST00000561036 C11orf16Q9NQ32 467 aa15.85■□□□□ 0.13
HDDC3-206ENST00000561036 TMEM9BQ9NQ34 198 aa15.85■□□□□ 0.13
HDDC3-206ENST00000561036 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.85■□□□□ 0.13
HDDC3-206ENST00000561036 MAN2C1Q9NTJ4 1040 aa15.85■□□□□ 0.13
HDDC3-206ENST00000561036 RLIMQ9NVW2 624 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms