RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 STARP49675 285 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 GATMP50440 423 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 DGKEP52429 567 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 CRADDP78560 199 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 CHRNB3Q05901 458 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 DMP1Q13316 513 aaPredicted RBP6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 C10orf120Q5SQS8 335 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 SAXO2Q658L1 398 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 ANKRD34AQ69YU3 496 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 CAPN13Q6MZZ7 669 aaPredicted RBP6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 FBXO46Q6PJ61 603 aaPredicted RBP6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 LARP4Q71RC2 724 aaKnown RBP eCLIP6.31□□□□□ -1.47e-7■□□□□ 8.8
TSPAN3-209ENST00000560715 PPP1R32Q7Z5V6 425 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 NKAIN4Q8IVV8 208 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 HS3ST5Q8IZT8 346 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 CLHC1Q8NHS4 586 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 ARNTL2Q8WYA1 636 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 NSMAFQ92636 917 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 CCDC126Q96EE4 140 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 CERS2Q96G23 380 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 SCARF2Q96GP6 870 aaPredicted RBP6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 ZNF251Q9BRH9 671 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 DPCDQ9BVM2 203 aaPredicted RBP6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 OR51E2Q9H255 320 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 BIN3Q9NQY0 253 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 ADARB2Q9NS39 739 aaKnown RBP6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 PRMT7Q9NVM4 692 aaPredicted RBP6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 BABAM2Q9NXR7 383 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 ERVW-1Q9UQF0 538 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 OSGIN2Q9Y236 505 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 ORC6Q9Y5N6 252 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 SLC22A7Q9Y694 548 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 OAS3Q9Y6K5 1087 aaKnown RBP6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 SIP14410 1827 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 MEX3AA1L020 520 aaKnown RBP6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 MPTX1A8MV57 137 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 A8MXK9 166 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 PLA2G10O15496 165 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 SGCEO43556 437 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 CACNG3O60359 315 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 WDR47O94967 919 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 STBD1O95210 358 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 TNNC2P02585 160 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 CSF3P09919 207 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 H2AFB1P0C5Y9 115 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 H2AFB2P0C5Z0 115 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 CSRP3P50461 194 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 CLCN5P51795 746 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 KPNA2P52292 529 aaKnown RBP6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 SNU13P55769 128 aaKnown RBP6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 CSNK2BP67870 215 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 EEF1A1P68104 462 aaKnown RBP6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 EEF1A2Q05639 463 aaKnown RBP6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 LGALS3BPQ08380 585 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 SCGB2A2Q13296 93 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 KEAP1Q14145 624 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 SMN1Q16637 294 aaKnown RBP6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 FUT11Q495W5 492 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 RABL3Q5HYI8 236 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 FAM76BQ5HYJ3 339 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 EEF1A1P5Q5VTE0 462 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 ZNF813Q6ZN06 617 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 RTL4Q6ZR62 310 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 C17orf107Q6ZR85 190 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 PARS2Q7L3T8 475 aaKnown RBP6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 TMCO2Q7Z6W1 182 aaPredicted RBP6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 ZC3HC1Q86WB0 502 aaKnown RBP6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 RNF130Q86XS8 419 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 DCP1BQ8IZD4 617 aaKnown RBP6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 ABI1Q8IZP0 508 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 STPG3Q8N7X2 389 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 TMEM161BQ8NDZ6 487 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 DUSP18Q8NEJ0 188 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 MCPH1Q8NEM0 835 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 GPR151Q8TDV0 419 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 C11orf24Q96F05 449 aaPredicted RBP6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 MRPL48Q96GC5 212 aaKnown RBP6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 P2RY13Q9BPV8 354 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 ABCC13Q9NSE7 274 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 SMPD4Q9NXE4 827 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 RNF24Q9Y225 148 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 FIS1Q9Y3D6 152 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 MAB21L2Q9Y586 359 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.3□□□□□ -1.4
TSPAN3-209ENST00000560715 A0A1B0GWJ7 208 aa6.3□□□□□ -1.4
TSPAN3-209ENST00000560715 TMEM150BA6NC51 233 aa6.3□□□□□ -1.4
TSPAN3-209ENST00000560715 TRABD2BA6NFA1 517 aa6.3□□□□□ -1.4
TSPAN3-209ENST00000560715 C17orf100A8MU93 164 aa6.3□□□□□ -1.4
TSPAN3-209ENST00000560715 H7C2Y5 167 aa6.3□□□□□ -1.4
TSPAN3-209ENST00000560715 PSMD9O00233 223 aa6.3□□□□□ -1.4
TSPAN3-209ENST00000560715 SLC16A4O15374 487 aa6.3□□□□□ -1.4
TSPAN3-209ENST00000560715 SLC43A1O75387 559 aa6.3□□□□□ -1.4
TSPAN3-209ENST00000560715 CLN5O75503 358 aa6.3□□□□□ -1.4
TSPAN3-209ENST00000560715 MPC2O95563 127 aa6.3□□□□□ -1.4
TSPAN3-209ENST00000560715 IFNA4P05014 189 aa6.3□□□□□ -1.4
TSPAN3-209ENST00000560715 FHP07954 510 aa6.3□□□□□ -1.4
TSPAN3-209ENST00000560715 ALDOCP09972 364 aaKnown RBP6.3□□□□□ -1.4
TSPAN3-209ENST00000560715 HLA-EP13747 358 aa6.3□□□□□ -1.4
TSPAN3-209ENST00000560715 YWHAQP27348 245 aa6.3□□□□□ -1.4
TSPAN3-209ENST00000560715 SDC4P31431 198 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms