RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 APOBEC4Q8WW27 367 aaKnown RBP7.97□□□□□ -1.13
TRAF3-209ENST00000560463 NRG4Q8WWG1 115 aa7.97□□□□□ -1.13
TRAF3-209ENST00000560463 SLC35B4Q969S0 331 aa7.97□□□□□ -1.13
TRAF3-209ENST00000560463 EME1Q96AY2 570 aa7.97□□□□□ -1.13
TRAF3-209ENST00000560463 RNF31Q96EP0 1072 aa7.97□□□□□ -1.13
TRAF3-209ENST00000560463 NRBF2Q96F24 287 aa7.97□□□□□ -1.13
TRAF3-209ENST00000560463 RMND5BQ96G75 393 aaPredicted RBP7.97□□□□□ -1.13
TRAF3-209ENST00000560463 ZNF300Q96RE9 604 aaPredicted RBP7.97□□□□□ -1.13
TRAF3-209ENST00000560463 WDR77Q9BQA1 342 aaPredicted RBP7.97□□□□□ -1.13
TRAF3-209ENST00000560463 OSBPL10Q9BXB5 764 aa7.97□□□□□ -1.13
TRAF3-209ENST00000560463 WWTR1Q9GZV5 400 aa7.97□□□□□ -1.13
TRAF3-209ENST00000560463 ZNF700Q9H0M5 742 aa7.97□□□□□ -1.13
TRAF3-209ENST00000560463 SEMA6AQ9H2E6 1030 aa7.97□□□□□ -1.13
TRAF3-209ENST00000560463 KCND3Q9UK17 655 aa7.97□□□□□ -1.13
TRAF3-209ENST00000560463 SLC13A4Q9UKG4 626 aa7.97□□□□□ -1.13
TRAF3-209ENST00000560463 CDV3Q9UKY7 258 aaKnown RBP7.97□□□□□ -1.13
TRAF3-209ENST00000560463 TCFL5Q9UL49 500 aa7.97□□□□□ -1.13
TRAF3-209ENST00000560463 FARSAQ9Y285 508 aaKnown RBP7.97□□□□□ -1.13
TRAF3-209ENST00000560463 SH3GLB1Q9Y371 365 aa7.97□□□□□ -1.13
TRAF3-209ENST00000560463 CFAP54Q96N23 3096 aa7.97□□□□□ -1.13
TRAF3-209ENST00000560463 CNTRLQ7Z7A1 2325 aa7.96□□□□□ -1.13
TRAF3-209ENST00000560463 IGHV1-45A0A0A0MS14 117 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 PMS2P1A4D2B8 440 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 CDRT15L2A8MXV6 281 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 hCG_2039718K7EN88 272 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 NME6O75414 186 aaPredicted RBP7.96□□□□□ -1.14
TRAF3-209ENST00000560463 UGT2B17O75795 530 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 DNAJB5O75953 348 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 ZIC2O95409 532 aaPredicted RBP7.96□□□□□ -1.14
TRAF3-209ENST00000560463 IL33O95760 270 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 ICAM2P13598 275 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 NID1P14543 1247 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 PEX2P28328 305 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 RBMS1P29558 406 aaKnown RBP7.96□□□□□ -1.14
TRAF3-209ENST00000560463 KRT20P35900 424 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 STAT5AP42229 794 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 PNLIPRP2P54317 469 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 ATP12AP54707 1039 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 NRG3P56975 720 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 GABREP78334 506 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 DNASE1L3Q13609 305 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 PUM1Q14671 1186 aaKnown RBP eCLIP7.96□□□□□ -1.14
TRAF3-209ENST00000560463 PCOLCEQ15113 449 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 ZNF141Q15928 474 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 EXT1Q16394 746 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 NRF1Q16656 503 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 GRAMD1BQ3KR37 738 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 LPCAT4Q643R3 524 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 PPP4R4Q6NUP7 873 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 FIGNL1Q6PIW4 674 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 NDUFAF7Q7L592 441 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 CARM1Q86X55 608 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 HIPK1Q86Z02 1210 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 ZDHHC13Q8IUH4 622 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 GRAMD2AQ8IUY3 354 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 CMIPQ8IY22 773 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 KBTBD2Q8IY47 623 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 TAGAPQ8N103 731 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 SLC34A3Q8N130 599 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 BCORP1Q8N888 145 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 ZNF321PQ8N8H1 164 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 ZNF441Q8N8Z8 693 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 ZNF527Q8NB42 609 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 ICA1LQ8NDH6 482 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 GPR32P1Q8NGA4 272 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 OR5K1Q8NHB7 308 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 M1APQ8TC57 530 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 CT55Q8WUE5 264 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 TMBIM1Q969X1 311 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 SDCCAG3Q96C92 435 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 GAL3ST4Q96RP7 486 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 EPYCQ99645 322 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 ARHGDIGQ99819 225 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 AMBRA1Q9C0C7 1298 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 POLR2J2Q9GZM3 115 aaKnown RBP7.96□□□□□ -1.14
TRAF3-209ENST00000560463 POLR2J3Q9H1A7 115 aaKnown RBP7.96□□□□□ -1.14
TRAF3-209ENST00000560463 NXF5Q9H1B4 397 aaKnown RBP7.96□□□□□ -1.14
TRAF3-209ENST00000560463 REEP1Q9H902 201 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.96□□□□□ -1.14
TRAF3-209ENST00000560463 FBXO34Q9NWN3 711 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 NDUFAF4Q9P032 175 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 FOXJ2Q9P0K8 574 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 ZNF443Q9Y2A4 671 aaPredicted RBP7.96□□□□□ -1.14
TRAF3-209ENST00000560463 FAM32AQ9Y421 112 aaKnown RBP7.96□□□□□ -1.14
TRAF3-209ENST00000560463 DTNAQ9Y4J8 743 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 PCDHGA6Q9Y5G7 932 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 HS3ST3B1Q9Y662 390 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 ENPP4Q9Y6X5 453 aa7.96□□□□□ -1.14
TRAF3-209ENST00000560463 IGHV3-20A0A0C4DH32 117 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 FAM149AA5PLN7 773 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 NPIPB9F8W1W9 429 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 G3V2T6 193 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 SOCS6O14544 535 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 TERTO14746 1132 aaKnown RBP7.95□□□□□ -1.14
TRAF3-209ENST00000560463 GFRA3O60609 400 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 RAD1O60671 282 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 E2F6O75461 281 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 ZFAND5O76080 213 aa7.95□□□□□ -1.14
TRAF3-209ENST00000560463 DXOO77932 396 aaKnown RBP7.95□□□□□ -1.14
TRAF3-209ENST00000560463 SEC24DO94855 1032 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms