RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 CTNND2Q9UQB3 1225 aa5.58□□□□□ -1.52
HERC1-208ENST00000560462 ZNF175Q9Y473 711 aa5.58□□□□□ -1.52
HERC1-208ENST00000560462 TRBV5-4A0A0C4DH59 114 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 A0A1B0GVL5 298 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 PRSS47A8MTI9 375 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 GCM2O75603 506 aaPredicted RBP5.57□□□□□ -1.52
HERC1-208ENST00000560462 SLU7O95391 586 aaKnown RBP5.57□□□□□ -1.52
HERC1-208ENST00000560462 C1orf105O95561 183 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 EPOP01588 193 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 SFTPBP07988 381 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 OR56A5P0C7T3 313 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 ANPEPP15144 967 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 PFKFB1P16118 471 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 ALOX12P18054 663 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 GABRB3P28472 473 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 MSH2P43246 934 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 POU6F2P78424 691 aaPredicted RBP5.57□□□□□ -1.52
HERC1-208ENST00000560462 ABATP80404 500 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 CDR2Q01850 454 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 TAF1AQ15573 450 aaPredicted RBP5.57□□□□□ -1.52
HERC1-208ENST00000560462 SLC1A5Q15758 541 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 STK11Q15831 433 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 BCL2A1Q16548 175 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 NTRK2Q16620 822 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 FASTKD1Q53R41 847 aaKnown RBP5.57□□□□□ -1.52
HERC1-208ENST00000560462 CCDC183Q5T5S1 534 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 DCAF12L2Q5VW00 463 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 ATL3Q6DD88 541 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 ISM2Q6H9L7 571 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 FAM180BQ6P0A1 224 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 TRIM40Q6P9F5 258 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 CES3Q6UWW8 571 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 ZNF572Q7Z3I7 529 aaPredicted RBP5.57□□□□□ -1.52
HERC1-208ENST00000560462 ASPGQ86U10 573 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 MOGAT3Q86VF5 341 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 PHF13Q86YI8 300 aaPredicted RBP5.57□□□□□ -1.52
HERC1-208ENST00000560462 ZNF786Q8N393 782 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 PCYOX1LQ8NBM8 494 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 ZNF740Q8NDX6 193 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 OR14A16Q8NHC5 309 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 NUBPLQ8TB37 319 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 RDH11Q8TC12 318 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 SLC2A12Q8TD20 617 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 PTPMT1Q8WUK0 201 aaPredicted RBP5.57□□□□□ -1.52
HERC1-208ENST00000560462 WDR60Q8WVS4 1066 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 SLC13A3Q8WWT9 602 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 MUCL1Q96DR8 90 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 SFXN2Q96NB2 322 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 PRAP1Q96NZ9 151 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 HBEGFQ99075 208 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 C1orf43Q9BWL3 253 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 OR2B2Q9GZK3 357 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 C11orf54Q9H0W9 315 aaPredicted RBP5.57□□□□□ -1.52
HERC1-208ENST00000560462 ACTR8Q9H981 624 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 MYNNQ9NPC7 610 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 SIX2Q9NPC8 291 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.57□□□□□ -1.52
HERC1-208ENST00000560462 FBXO34Q9NWN3 711 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 TAS2R10Q9NYW0 307 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 TREM2Q9NZC2 230 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 NPAP1Q9NZP6 1156 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 KIF17Q9P2E2 1029 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 GRID1Q9ULK0 1009 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 MYO6Q9UM54 1294 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 CLEC4AQ9UMR7 237 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 ZNF148Q9UQR1 794 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 PRSS21Q9Y6M0 314 aa5.57□□□□□ -1.52
HERC1-208ENST00000560462 A0A087WWL8 130 aa5.56□□□□□ -1.52
HERC1-208ENST00000560462 E9PQ18 207 aa5.56□□□□□ -1.52
HERC1-208ENST00000560462 AQP8O94778 261 aa5.56□□□□□ -1.52
HERC1-208ENST00000560462 INMTO95050 263 aa5.56□□□□□ -1.52
HERC1-208ENST00000560462 GNA14O95837 355 aa5.56□□□□□ -1.52
HERC1-208ENST00000560462 SAGP10523 405 aaPredicted RBP5.56□□□□□ -1.52
HERC1-208ENST00000560462 CCR7P32248 378 aa5.56□□□□□ -1.52
HERC1-208ENST00000560462 CASP3P42574 277 aa5.56□□□□□ -1.52
HERC1-208ENST00000560462 HSD17B7P56937 341 aa5.56□□□□□ -1.52
HERC1-208ENST00000560462 EEFSECP57772 596 aaKnown RBP5.56□□□□□ -1.52
HERC1-208ENST00000560462 TNFRSF17Q02223 184 aa5.56□□□□□ -1.52
HERC1-208ENST00000560462 CTBP1Q13363 440 aa5.56□□□□□ -1.52
HERC1-208ENST00000560462 DCTN2Q13561 401 aaKnown RBP5.56□□□□□ -1.52
HERC1-208ENST00000560462 PAFAH1B3Q15102 231 aaKnown RBP5.56□□□□□ -1.52
HERC1-208ENST00000560462 RPS6KA2Q15349 733 aa5.56□□□□□ -1.52
HERC1-208ENST00000560462 NCBP2-AS2Q69YL0 99 aa5.56□□□□□ -1.52
HERC1-208ENST00000560462 CAPN13Q6MZZ7 669 aaPredicted RBP5.56□□□□□ -1.52
HERC1-208ENST00000560462 ALKBH5Q6P6C2 394 aaKnown RBP5.56□□□□□ -1.52
HERC1-208ENST00000560462 ZNF549Q6P9A3 640 aa5.56□□□□□ -1.52
HERC1-208ENST00000560462 LCTLQ6UWM7 567 aa5.56□□□□□ -1.52
HERC1-208ENST00000560462 ANGPTL8Q6UXH0 198 aa5.56□□□□□ -1.52
HERC1-208ENST00000560462 MON1BQ7L1V2 547 aa5.56□□□□□ -1.52
HERC1-208ENST00000560462 TBC1D1Q86TI0 1168 aaPredicted RBP5.56□□□□□ -1.52
HERC1-208ENST00000560462 EXOC3L1Q86VI1 746 aa5.56□□□□□ -1.52
HERC1-208ENST00000560462 GABRG1Q8N1C3 465 aa5.56□□□□□ -1.52
HERC1-208ENST00000560462 TOR1AIP2Q8NFQ8 470 aa5.56□□□□□ -1.52
HERC1-208ENST00000560462 OR13C4Q8NGS5 318 aa5.56□□□□□ -1.52
HERC1-208ENST00000560462 LINC01006Q8NI28 216 aa5.56□□□□□ -1.52
HERC1-208ENST00000560462 GSDMBQ8TAX9 411 aa5.56□□□□□ -1.52
HERC1-208ENST00000560462 SKA2Q8WVK7 121 aaPredicted RBP5.56□□□□□ -1.52
HERC1-208ENST00000560462 GMPPAQ96IJ6 420 aaPredicted RBP5.56□□□□□ -1.52
HERC1-208ENST00000560462 TIGD1Q96MW7 591 aa5.56□□□□□ -1.52
HERC1-208ENST00000560462 KRTAP4-5Q9BYR2 181 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms