RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 TBX6O95947 436 aaPredicted RBP4.3□□□□□ -1.72
MARK3-220ENST00000560417 GSTT2P0CG29 244 aa4.3□□□□□ -1.72
MARK3-220ENST00000560417 GSTT2BP0CG30 244 aa4.3□□□□□ -1.72
MARK3-220ENST00000560417 UQCRBP14927 111 aa4.3□□□□□ -1.72
MARK3-220ENST00000560417 ACADSP16219 412 aa4.3□□□□□ -1.72
MARK3-220ENST00000560417 OR1D4P47884 311 aa4.3□□□□□ -1.72
MARK3-220ENST00000560417 METAP1P53582 386 aa4.3□□□□□ -1.72
MARK3-220ENST00000560417 KLHL30Q0D2K2 578 aa4.3□□□□□ -1.72
MARK3-220ENST00000560417 MICAQ29983 383 aa4.3□□□□□ -1.72
MARK3-220ENST00000560417 CNPY1Q3B7I2 92 aa4.3□□□□□ -1.72
MARK3-220ENST00000560417 LINC01620Q4KN68 170 aa4.3□□□□□ -1.72
MARK3-220ENST00000560417 FADS6Q8N9I5 356 aa4.3□□□□□ -1.72
MARK3-220ENST00000560417 OR2L2Q8NH16 312 aa4.3□□□□□ -1.72
MARK3-220ENST00000560417 SYAP1Q96A49 352 aaPredicted RBP4.3□□□□□ -1.72
MARK3-220ENST00000560417 CASD1Q96PB1 797 aa4.3□□□□□ -1.72
MARK3-220ENST00000560417 VPS35Q96QK1 796 aa4.3□□□□□ -1.72
MARK3-220ENST00000560417 WDR76Q9H967 626 aa4.3□□□□□ -1.72
MARK3-220ENST00000560417 MEPEQ9NQ76 525 aaPredicted RBP4.3□□□□□ -1.72
MARK3-220ENST00000560417 C1orf123Q9NWV4 160 aa4.3□□□□□ -1.72
MARK3-220ENST00000560417 SENP1Q9P0U3 644 aa4.3□□□□□ -1.72
MARK3-220ENST00000560417 SH3BGRL2Q9UJC5 107 aa4.3□□□□□ -1.72
MARK3-220ENST00000560417 BLOC1S6Q9UL45 172 aa4.3□□□□□ -1.72
MARK3-220ENST00000560417 NTNG1Q9Y2I2 539 aa4.3□□□□□ -1.72
MARK3-220ENST00000560417 AP1M2Q9Y6Q5 423 aa4.3□□□□□ -1.72
MARK3-220ENST00000560417 ABCA9Q8IUA7 1624 aa4.3□□□□□ -1.72
MARK3-220ENST00000560417 FRMPD1Q5SYB0 1578 aa4.3□□□□□ -1.72
MARK3-220ENST00000560417 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.3□□□□□ -1.72
MARK3-220ENST00000560417 TRAV9-2A0A087WT02 112 aa4.29□□□□□ -1.72
MARK3-220ENST00000560417 A0A087WWV3 80 aa4.29□□□□□ -1.72
MARK3-220ENST00000560417 ZNF840PA6NDX5 716 aa4.29□□□□□ -1.72
MARK3-220ENST00000560417 SRPX2O60687 465 aaPredicted RBP4.29□□□□□ -1.72
MARK3-220ENST00000560417 NOL3O60936 208 aaKnown RBP4.29□□□□□ -1.72
MARK3-220ENST00000560417 PEX11AO75192 247 aa4.29□□□□□ -1.72
MARK3-220ENST00000560417 HPP00738 406 aa4.29□□□□□ -1.72
MARK3-220ENST00000560417 PIGRP01833 764 aa4.29□□□□□ -1.72
MARK3-220ENST00000560417 KRT8P05787 483 aa4.29□□□□□ -1.72
MARK3-220ENST00000560417 CALCBP10092 127 aa4.29□□□□□ -1.72
MARK3-220ENST00000560417 TNNI3P19429 210 aa4.29□□□□□ -1.72
MARK3-220ENST00000560417 PTMSP20962 102 aa4.29□□□□□ -1.72
MARK3-220ENST00000560417 HTR2AP28223 471 aa4.29□□□□□ -1.72
MARK3-220ENST00000560417 HMGCS2P54868 508 aa4.29□□□□□ -1.72
MARK3-220ENST00000560417 UBE2V2Q15819 145 aa4.29□□□□□ -1.72
MARK3-220ENST00000560417 PPP1R3AQ16821 1122 aa4.29□□□□□ -1.72
MARK3-220ENST00000560417 STAC2Q6ZMT1 411 aa4.29□□□□□ -1.72
MARK3-220ENST00000560417 CEACAM19Q7Z692 300 aa4.29□□□□□ -1.72
MARK3-220ENST00000560417 GRAMD2AQ8IUY3 354 aa4.29□□□□□ -1.72
MARK3-220ENST00000560417 RFESDQ8TAC1 157 aa4.29□□□□□ -1.72
MARK3-220ENST00000560417 ZNF671Q8TAW3 534 aa4.29□□□□□ -1.72
MARK3-220ENST00000560417 UPRTQ96BW1 309 aa4.29□□□□□ -1.72
MARK3-220ENST00000560417 DTNBP1Q96EV8 351 aa4.29□□□□□ -1.72
MARK3-220ENST00000560417 MCCC1Q96RQ3 725 aaPredicted RBP4.29□□□□□ -1.72
MARK3-220ENST00000560417 RANBP9Q96S59 729 aa4.29□□□□□ -1.72
MARK3-220ENST00000560417 ZNF416Q9BWM5 594 aa4.29□□□□□ -1.72
MARK3-220ENST00000560417 SLC25A51Q9H1U9 297 aa4.29□□□□□ -1.72
MARK3-220ENST00000560417 IMPAD1Q9NX62 359 aa4.29□□□□□ -1.72
MARK3-220ENST00000560417 BARX2Q9UMQ3 279 aaPredicted RBP4.29□□□□□ -1.72
MARK3-220ENST00000560417 AP4B1Q9Y6B7 739 aa4.29□□□□□ -1.72
MARK3-220ENST00000560417 SIGLEC1Q9BZZ2 1709 aa4.29□□□□□ -1.72
MARK3-220ENST00000560417 E9PAM4 449 aa4.28□□□□□ -1.72
MARK3-220ENST00000560417 SAP18O00422 153 aaKnown RBP4.28□□□□□ -1.72
MARK3-220ENST00000560417 NDC80O14777 642 aa4.28□□□□□ -1.72
MARK3-220ENST00000560417 ZNF354AO60765 605 aaPredicted RBP4.28□□□□□ -1.72
MARK3-220ENST00000560417 JCHAINP01591 159 aa4.28□□□□□ -1.72
MARK3-220ENST00000560417 HMGCLP35914 325 aa4.28□□□□□ -1.72
MARK3-220ENST00000560417 PTGER3P43115 390 aa4.28□□□□□ -1.72
MARK3-220ENST00000560417 ALDH3B2P48448 385 aa4.28□□□□□ -1.72
MARK3-220ENST00000560417 ACADVLP49748 655 aa4.28□□□□□ -1.72
MARK3-220ENST00000560417 NAPAP54920 295 aa4.28□□□□□ -1.72
MARK3-220ENST00000560417 SLC8A3P57103 927 aa4.28□□□□□ -1.72
MARK3-220ENST00000560417 CRMP1Q14194 572 aa4.28□□□□□ -1.72
MARK3-220ENST00000560417 HIGD2BQ4VC39 106 aa4.28□□□□□ -1.72
MARK3-220ENST00000560417 LGSNQ5TDP6 509 aa4.28□□□□□ -1.72
MARK3-220ENST00000560417 CENPUQ71F23 418 aa4.28□□□□□ -1.72
MARK3-220ENST00000560417 CENPLQ8N0S6 344 aaPredicted RBP4.28□□□□□ -1.72
MARK3-220ENST00000560417 STKLD1Q8NE28 680 aa4.28□□□□□ -1.72
MARK3-220ENST00000560417 ZBED6CLQ96FA7 236 aaPredicted RBP4.28□□□□□ -1.72
MARK3-220ENST00000560417 HPDLQ96IR7 371 aa4.28□□□□□ -1.72
MARK3-220ENST00000560417 FEM1AQ9BSK4 669 aa4.28□□□□□ -1.72
MARK3-220ENST00000560417 COMMD4Q9H0A8 199 aa4.28□□□□□ -1.72
MARK3-220ENST00000560417 RBM28Q9NW13 759 aaKnown RBP4.28□□□□□ -1.72
MARK3-220ENST00000560417 GALPQ9UBC7 116 aa4.28□□□□□ -1.72
MARK3-220ENST00000560417 DUSP12Q9UNI6 340 aa4.28□□□□□ -1.72
MARK3-220ENST00000560417 CHMP2BQ9UQN3 213 aa4.28□□□□□ -1.72
MARK3-220ENST00000560417 KIF3AQ9Y496 699 aa4.28□□□□□ -1.72
MARK3-220ENST00000560417 CD109Q6YHK3 1445 aa4.28□□□□□ -1.72
MARK3-220ENST00000560417 ANGPT2O15123 496 aa4.27□□□□□ -1.73
MARK3-220ENST00000560417 PPIHO43447 177 aaKnown RBP4.27□□□□□ -1.73
MARK3-220ENST00000560417 GPRIN2O60269 458 aa4.27□□□□□ -1.73
MARK3-220ENST00000560417 CT45A10P0DMU9 189 aa4.27□□□□□ -1.73
MARK3-220ENST00000560417 XRCC1P18887 633 aaPredicted RBP4.27□□□□□ -1.73
MARK3-220ENST00000560417 EMDP50402 254 aa4.27□□□□□ -1.73
MARK3-220ENST00000560417 ARHGDIBP52566 201 aa4.27□□□□□ -1.73
MARK3-220ENST00000560417 LMO4P61968 165 aa4.27□□□□□ -1.73
MARK3-220ENST00000560417 EIPR1Q53HC9 387 aa4.27□□□□□ -1.73
MARK3-220ENST00000560417 ASPHD2Q6ICH7 369 aa4.27□□□□□ -1.73
MARK3-220ENST00000560417 SULT1C3Q6IMI6 304 aa4.27□□□□□ -1.73
MARK3-220ENST00000560417 PARGQ86W56 976 aa4.27□□□□□ -1.73
MARK3-220ENST00000560417 SPEM1Q8N4L4 309 aa4.27□□□□□ -1.73
MARK3-220ENST00000560417 ELMO2Q96JJ3 720 aa4.27□□□□□ -1.73
MARK3-220ENST00000560417 POLD4Q9HCU8 107 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms