RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 MSANTD3Q96H12 275 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 CCL26Q9Y258 94 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 LOC285095A0A1B0GVY8 99 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 OR2T1O43869 369 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 FESP07332 822 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 STOMP27105 288 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 CSNK1DP48730 415 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 NKX3-2P78367 333 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 PLBD1Q6P4A8 553 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 TLDC1Q6P9B6 456 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 GRPEL2Q8TAA5 225 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 CNIH3Q8TBE1 160 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 SEC14L1Q92503 715 aa12.72□□□□□ -0.37
TRAF3-208ENST00000560371 RASAL1O95294 804 aa12.71□□□□□ -0.37
TRAF3-208ENST00000560371 PRLP01236 227 aa12.71□□□□□ -0.37
TRAF3-208ENST00000560371 DAP3P51398 398 aaKnown RBP12.71□□□□□ -0.37
TRAF3-208ENST00000560371 ZNF367Q7RTV3 350 aa12.71□□□□□ -0.37
TRAF3-208ENST00000560371 NRMQ8IXM6 262 aa12.71□□□□□ -0.37
TRAF3-208ENST00000560371 RCBTB1Q8NDN9 531 aa12.71□□□□□ -0.37
TRAF3-208ENST00000560371 TRIM43Q96BQ3 446 aaPredicted RBP12.71□□□□□ -0.37
TRAF3-208ENST00000560371 INTS1Q8N201 2190 aaKnown RBP12.71□□□□□ -0.37
TRAF3-208ENST00000560371 TNFSF4P23510 183 aa12.71□□□□□ -0.37
TRAF3-208ENST00000560371 UGT2B10P36537 528 aa12.71□□□□□ -0.37
TRAF3-208ENST00000560371 RBMXP38159 391 aaKnown RBP12.71□□□□□ -0.37
TRAF3-208ENST00000560371 CTSCP53634 463 aa12.71□□□□□ -0.37
TRAF3-208ENST00000560371 SLC26A5P58743 744 aa12.71□□□□□ -0.37
TRAF3-208ENST00000560371 RPS26P11Q5JNZ5 115 aaPredicted RBP12.71□□□□□ -0.37
TRAF3-208ENST00000560371 FAM26DQ5JW98 314 aa12.71□□□□□ -0.37
TRAF3-208ENST00000560371 TMEM184AQ6ZMB5 413 aa12.71□□□□□ -0.37
TRAF3-208ENST00000560371 PITHD1Q9GZP4 211 aaPredicted RBP12.71□□□□□ -0.37
TRAF3-208ENST00000560371 KCNIP1Q9NZI2 227 aa12.71□□□□□ -0.37
TRAF3-208ENST00000560371 SOBPA7XYQ1 873 aa12.71□□□□□ -0.37
TRAF3-208ENST00000560371 RGS19P49795 217 aa12.71□□□□□ -0.37
TRAF3-208ENST00000560371 ZNF140P52738 457 aaPredicted RBP12.71□□□□□ -0.37
TRAF3-208ENST00000560371 NAGSQ8N159 534 aa12.71□□□□□ -0.37
TRAF3-208ENST00000560371 SYT14Q8NB59 555 aa12.71□□□□□ -0.37
TRAF3-208ENST00000560371 MACROD1Q9BQ69 325 aa12.71□□□□□ -0.37
TRAF3-208ENST00000560371 TUBA1CQ9BQE3 449 aa12.71□□□□□ -0.37
TRAF3-208ENST00000560371 BOKQ9UMX3 212 aaPredicted RBP12.71□□□□□ -0.37
TRAF3-208ENST00000560371 NENFQ9UMX5 172 aa12.71□□□□□ -0.37
TRAF3-208ENST00000560371 HS3ST2Q9Y278 367 aa12.71□□□□□ -0.37
TRAF3-208ENST00000560371 DOPEY2Q9Y3R5 2298 aa12.71□□□□□ -0.37
TRAF3-208ENST00000560371 OR6C70A6NIJ9 312 aa12.71□□□□□ -0.37
TRAF3-208ENST00000560371 SRPX2O60687 465 aaPredicted RBP12.71□□□□□ -0.37
TRAF3-208ENST00000560371 FGF4P08620 206 aa12.71□□□□□ -0.37
TRAF3-208ENST00000560371 CRISP1P54107 249 aa12.71□□□□□ -0.37
TRAF3-208ENST00000560371 FRS2Q8WU20 508 aa12.71□□□□□ -0.37
TRAF3-208ENST00000560371 GPN2Q9H9Y4 310 aaPredicted RBP12.71□□□□□ -0.37
TRAF3-208ENST00000560371 IGSF5Q9NSI5 407 aa12.71□□□□□ -0.37
TRAF3-208ENST00000560371 ENPP4Q9Y6X5 453 aa12.71□□□□□ -0.37
TRAF3-208ENST00000560371 PLSCR5A0PG75 271 aa12.71□□□□□ -0.38
TRAF3-208ENST00000560371 PET100P0DJ07 73 aa12.71□□□□□ -0.38
TRAF3-208ENST00000560371 TNFRSF1BP20333 461 aa12.71□□□□□ -0.38
TRAF3-208ENST00000560371 GDF1P27539 372 aa12.71□□□□□ -0.38
TRAF3-208ENST00000560371 SHHQ15465 462 aa12.71□□□□□ -0.38
TRAF3-208ENST00000560371 COQ5Q5HYK3 327 aa12.71□□□□□ -0.38
TRAF3-208ENST00000560371 ANKRD54Q6NXT1 300 aa12.71□□□□□ -0.38
TRAF3-208ENST00000560371 OR4K5Q8NGD3 323 aa12.71□□□□□ -0.38
TRAF3-208ENST00000560371 SOX17Q9H6I2 414 aaPredicted RBP12.71□□□□□ -0.38
TRAF3-208ENST00000560371 TMEM9Q9P0T7 183 aa12.71□□□□□ -0.38
TRAF3-208ENST00000560371 F5H5K5 113 aa12.71□□□□□ -0.38
TRAF3-208ENST00000560371 AOAHP28039 575 aa12.71□□□□□ -0.38
TRAF3-208ENST00000560371 CRABP1P29762 137 aa12.71□□□□□ -0.38
TRAF3-208ENST00000560371 GCH1P30793 250 aa12.71□□□□□ -0.38
TRAF3-208ENST00000560371 GAREM2Q75VX8 874 aa12.71□□□□□ -0.38
TRAF3-208ENST00000560371 PNPLA1Q8N8W4 532 aa12.71□□□□□ -0.38
TRAF3-208ENST00000560371 SLC6A7Q99884 636 aa12.71□□□□□ -0.38
TRAF3-208ENST00000560371 ENKD1Q9H0I2 346 aa12.71□□□□□ -0.38
TRAF3-208ENST00000560371 POT1Q9NUX5 634 aa12.71□□□□□ -0.38
TRAF3-208ENST00000560371 MTMR10Q9NXD2 777 aa12.71□□□□□ -0.38
TRAF3-208ENST00000560371 FOXE1O00358 373 aaPredicted RBP12.7□□□□□ -0.38
TRAF3-208ENST00000560371 ANKRD28O15084 1053 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 SCRG1O75711 98 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 MT-ND2P03891 347 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 TMEM225BP0DP42 221 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 RRADP55042 308 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 SFT2D3Q587I9 215 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 TMEM31Q5JXX7 168 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 SCGB1C1Q8TD33 95 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 ACTR6Q9GZN1 396 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 HIF3AQ9Y2N7 669 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 PIGBOS1A0A0B4J2F0 54 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 A0A1B0GTW7 788 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 GFRA2O00451 464 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 NDUFB2O95178 105 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 SFTPBP07988 381 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 ZXDBP98169 803 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 GLO1Q04760 184 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 OR5K2Q8NHB8 316 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 OR6C1Q96RD1 312 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 ZBP1Q9H171 429 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 USP36Q9P275 1121 aaKnown RBP12.7□□□□□ -0.38
TRAF3-208ENST00000560371 EXTL2Q9UBQ6 330 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 HIST1H1TP22492 207 aaPredicted RBP12.7□□□□□ -0.38
TRAF3-208ENST00000560371 CDKN2CP42773 168 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 PRDX1Q06830 199 aaKnown RBP12.7□□□□□ -0.38
TRAF3-208ENST00000560371 HSF5Q4G112 596 aaPredicted RBP12.7□□□□□ -0.38
TRAF3-208ENST00000560371 TRIM61Q5EBN2 209 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 SHFQ7M4L6 423 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 MRPL21Q7Z2W9 205 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms