RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 OLIG3Q7RTU3 272 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 GDF7Q7Z4P5 450 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 BTLAQ7Z6A9 289 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 CCDC190Q86UF4 302 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 TRIM73Q86UV7 250 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 OOSP2Q86WS3 158 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 SLC34A3Q8N130 599 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 ZNF619Q8N2I2 560 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 SLC43A2Q8N370 569 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 IQCF1Q8N6M8 205 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 SLC16A11Q8NCK7 471 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 SMRP1Q8NCR6 262 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 RPLP0P6Q8NHW5 317 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 ADAMTS18Q8TE60 1221 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 CDS1Q92903 461 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 SLC41A3Q96GZ6 507 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 WDFY2Q96P53 400 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 GAS2L1Q99501 681 aaPredicted RBP7.55□□□□□ -1.2
SMAD3-212ENST00000559937 COQ7Q99807 217 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 CENPOQ9BU64 300 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 JAM3Q9BX67 310 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 CPNE5Q9HCH3 593 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 POLMQ9NP87 494 aaPredicted RBP7.55□□□□□ -1.2
SMAD3-212ENST00000559937 C14orf105Q9NVL8 296 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 CHCHD3Q9NX63 227 aaKnown RBP7.55□□□□□ -1.2
SMAD3-212ENST00000559937 CLDND1Q9NY35 253 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 TAS2R16Q9NYV7 291 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 NLGN3Q9NZ94 848 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 CPNE7Q9UBL6 633 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 SSR3Q9UNL2 185 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 TMEM5Q9Y2B1 443 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 CA5BQ9Y2D0 317 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 CHST2Q9Y4C5 530 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 CDH10Q9Y6N8 788 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 THADAQ6YHU6 1953 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 OR5K3A6NET4 321 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 TTC36A6NLP5 189 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 CYR61O00622 381 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 TPST2O60704 377 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 COQ9O75208 318 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 GPX5O75715 221 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 ZIC2O95409 532 aaPredicted RBP7.54□□□□□ -1.2
SMAD3-212ENST00000559937 PTTG1O95997 202 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 IL1AP01583 271 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 IGHV4-34P06331 123 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 HBQ1P09105 142 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 NID1P14543 1247 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 POU3F3P20264 500 aaPredicted RBP7.54□□□□□ -1.2
SMAD3-212ENST00000559937 PTGER1P34995 402 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 SOX18P35713 384 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 LTBRP36941 435 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 CRYBB2P43320 205 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 BLKP51451 505 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 POU6F2P78424 691 aaPredicted RBP7.54□□□□□ -1.2
SMAD3-212ENST00000559937 SIM1P81133 766 aaPredicted RBP7.54□□□□□ -1.2
SMAD3-212ENST00000559937 ACSM1Q08AH1 577 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 EIF2B5Q13144 721 aaKnown RBP7.54□□□□□ -1.2
SMAD3-212ENST00000559937 TPBGQ13641 420 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 CCINQ13939 588 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 DUSP5Q16690 384 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 PGGHGQ32M88 737 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 DCST2Q5T1A1 773 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 AADACL4Q5VUY2 407 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 ZNF620Q6ZNG0 422 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 PRICKLE2Q7Z3G6 844 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 LYSMD2Q8IV50 215 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 CA13Q8N1Q1 262 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 CLIP4Q8N3C7 705 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 COX18Q8N8Q8 333 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 POGLUT1Q8NBL1 392 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 FLCNQ8NFG4 579 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 OR13H1Q8NG92 308 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 OR8D4Q8NGM9 314 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 OR10G6Q8NH81 332 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 BRIX1Q8TDN6 353 aaKnown RBP7.54□□□□□ -1.2
SMAD3-212ENST00000559937 SNRNP27Q8WVK2 155 aaKnown RBP7.54□□□□□ -1.2
SMAD3-212ENST00000559937 FAM3CQ92520 227 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 SLC9A6Q92581 669 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 SLC35B4Q969S0 331 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 CTHRC1Q96CG8 243 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 LRR1Q96L50 414 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 FCRL4Q96PJ5 515 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 GPA33Q99795 319 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 MED18Q9BUE0 208 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 CCDC32Q9BV29 185 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 ASPNQ9BXN1 380 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 PLA2G12AQ9BZM1 189 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 C6orf62Q9GZU0 229 aaPredicted RBP7.54□□□□□ -1.2
SMAD3-212ENST00000559937 QRSL1Q9H0R6 528 aaKnown RBP7.54□□□□□ -1.2
SMAD3-212ENST00000559937 CHRDQ9H2X0 955 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 FN3KQ9H479 309 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 EGLN3Q9H6Z9 239 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 SYNDIG1Q9H7V2 258 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 MAT2BQ9NZL9 334 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 CD207Q9UJ71 328 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 POMT2Q9UKY4 750 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 TRAPPC4Q9Y296 219 aa7.54□□□□□ -1.2
SMAD3-212ENST00000559937 EXOGQ9Y2C4 368 aaKnown RBP7.54□□□□□ -1.2
SMAD3-212ENST00000559937 GPR55Q9Y2T6 319 aaPredicted RBP7.54□□□□□ -1.2
SMAD3-212ENST00000559937 TDRD6O60522 2096 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms