RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 BCL2L10Q9HD36 194 aa9.62□□□□□ -0.87
TPM1-221ENST00000559831 POLE3Q9NRF9 147 aa9.62□□□□□ -0.87
TPM1-221ENST00000559831 ADPRHL2Q9NX46 363 aa9.62□□□□□ -0.87
TPM1-221ENST00000559831 DKK4Q9UBT3 224 aa9.62□□□□□ -0.87
TPM1-221ENST00000559831 SEC14L3Q9UDX4 400 aa9.62□□□□□ -0.87
TPM1-221ENST00000559831 RPS6KA6Q9UK32 745 aa9.62□□□□□ -0.87
TPM1-221ENST00000559831 NPFFR2Q9Y5X5 522 aa9.62□□□□□ -0.87
TPM1-221ENST00000559831 GPC6Q9Y625 555 aaPredicted RBP9.62□□□□□ -0.87
TPM1-221ENST00000559831 TCRBV5S2A0A599 114 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 MED19A0JLT2 244 aaPredicted RBP9.61□□□□□ -0.87
TPM1-221ENST00000559831 AQP12BA6NM10 295 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 SUV39H1O43463 412 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 TSPAN2O60636 221 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 ZNF354AO60765 605 aaPredicted RBP9.61□□□□□ -0.87
TPM1-221ENST00000559831 ICOSLGO75144 302 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 ENTPD5O75356 428 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 SERPINB7O75635 380 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 PPM1BO75688 479 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 UTS2O95399 124 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 CYP4B1P13584 511 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 ETS2P15036 469 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 DCTP40126 519 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 EIF2S3P41091 472 aaKnown RBP9.61□□□□□ -0.87
TPM1-221ENST00000559831 SOX3P41225 446 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 SSR4P51571 173 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 FBXW4P57775 412 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 MLF1P58340 268 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 ACTR3P61158 418 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 PSPHP78330 225 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 ELF3P78545 371 aaPredicted RBP9.61□□□□□ -0.87
TPM1-221ENST00000559831 DMTNQ08495 405 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.61□□□□□ -0.87
TPM1-221ENST00000559831 GRAMD1BQ3KR37 738 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 CRB2Q5IJ48 1285 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 ZNF311Q5JNZ3 666 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 BROXQ5VW32 411 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 DESI1Q6ICB0 168 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 JMJD6Q6NYC1 403 aaPredicted RBP9.61□□□□□ -0.87
TPM1-221ENST00000559831 ENPP6Q6UWR7 440 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 CCDC81Q6ZN84 652 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 LRRC69Q6ZNQ3 347 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 CBLL1Q75N03 491 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 VRK2Q86Y07 508 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 AQP12AQ8IXF9 295 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 GALNT16Q8N428 558 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 TMEM156Q8N614 296 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 TMEM102Q8N9M5 508 aaPredicted RBP9.61□□□□□ -0.87
TPM1-221ENST00000559831 OR52P1PQ8NH57 321 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 ASB15Q8WXK1 588 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 ZG16BQ96DA0 208 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 ZNF354BQ96LW1 612 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 RNF145Q96MT1 663 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 RASL10BQ96S79 203 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 SEPHS2Q99611 448 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 SPATA5L1Q9BVQ7 753 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 LHPPQ9H008 270 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 ING2Q9H160 280 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 DCAF13Q9NV06 445 aaKnown RBP9.61□□□□□ -0.87
TPM1-221ENST00000559831 FLRT3Q9NZU0 649 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 SAMD4AQ9UPU9 718 aaKnown RBP9.61□□□□□ -0.87
TPM1-221ENST00000559831 ZNF443Q9Y2A4 671 aaPredicted RBP9.61□□□□□ -0.87
TPM1-221ENST00000559831 RAXQ9Y2V3 346 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 YARS2Q9Y2Z4 477 aaKnown RBP9.61□□□□□ -0.87
TPM1-221ENST00000559831 PCDHGA10Q9Y5H3 936 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 AKAP13Q12802 2813 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 APC2O95996 2303 aa9.61□□□□□ -0.87
TPM1-221ENST00000559831 DSPPQ9NZW4 1301 aa9.6□□□□□ -0.87
TPM1-221ENST00000559831 ACACAQ13085 2346 aa9.6□□□□□ -0.87
TPM1-221ENST00000559831 DCHS1Q96JQ0 3298 aa9.6□□□□□ -0.87
TPM1-221ENST00000559831 URB1O60287 2271 aaKnown RBP9.6□□□□□ -0.87
TPM1-221ENST00000559831 CENPVL1A0A0U1RR11 272 aa9.6□□□□□ -0.87
TPM1-221ENST00000559831 TCRBV3S1A0A5B6 114 aa9.6□□□□□ -0.87
TPM1-221ENST00000559831 DHRS12A0PJE2 317 aa9.6□□□□□ -0.87
TPM1-221ENST00000559831 C1QTNF9BB2RNN3 333 aa9.6□□□□□ -0.87
TPM1-221ENST00000559831 UGT2B11O75310 529 aa9.6□□□□□ -0.87
TPM1-221ENST00000559831 UGT2B17O75795 530 aa9.6□□□□□ -0.87
TPM1-221ENST00000559831 PRKD3O94806 890 aa9.6□□□□□ -0.87
TPM1-221ENST00000559831 OR6B1O95007 311 aa9.6□□□□□ -0.87
TPM1-221ENST00000559831 MFN2O95140 757 aa9.6□□□□□ -0.87
TPM1-221ENST00000559831 DBIP07108 87 aaKnown RBP9.6□□□□□ -0.87
TPM1-221ENST00000559831 C8BP07358 591 aa9.6□□□□□ -0.87
TPM1-221ENST00000559831 C1QTNF9P0C862 333 aa9.6□□□□□ -0.87
TPM1-221ENST00000559831 PABPC4LP0CB38 370 aaKnown RBP9.6□□□□□ -0.87
TPM1-221ENST00000559831 HPGDP15428 266 aa9.6□□□□□ -0.87
TPM1-221ENST00000559831 IL7RP16871 459 aa9.6□□□□□ -0.87
TPM1-221ENST00000559831 CD247P20963 164 aa9.6□□□□□ -0.87
TPM1-221ENST00000559831 PSMA4P25789 261 aaKnown RBP9.6□□□□□ -0.87
TPM1-221ENST00000559831 TMED10P49755 219 aaKnown RBP9.6□□□□□ -0.87
TPM1-221ENST00000559831 CCL11P51671 97 aa9.6□□□□□ -0.87
TPM1-221ENST00000559831 CRYBA2P53672 197 aa9.6□□□□□ -0.87
TPM1-221ENST00000559831 PNLIPRP2P54317 469 aa9.6□□□□□ -0.87
TPM1-221ENST00000559831 ATP12AP54707 1039 aa9.6□□□□□ -0.87
TPM1-221ENST00000559831 EFR3AQ14156 821 aa9.6□□□□□ -0.87
TPM1-221ENST00000559831 LARS2Q15031 903 aaKnown RBP9.6□□□□□ -0.87
TPM1-221ENST00000559831 MAPK14Q16539 360 aa9.6□□□□□ -0.87
TPM1-221ENST00000559831 MEP1AQ16819 746 aa9.6□□□□□ -0.87
TPM1-221ENST00000559831 CRTC2Q53ET0 693 aaPredicted RBP9.6□□□□□ -0.87
TPM1-221ENST00000559831 PDZK1Q5T2W1 519 aa9.6□□□□□ -0.87
TPM1-221ENST00000559831 H3F3CQ6NXT2 135 aa9.6□□□□□ -0.87
TPM1-221ENST00000559831 LYPD8Q6UX82 237 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms