RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 ANKRD19PQ9H560 264 aa11.77□□□□□ -0.53
USP3-213ENST00000559711 PNO1Q9NRX1 252 aaKnown RBP11.77□□□□□ -0.53
USP3-213ENST00000559711 VPS13AQ96RL7 3174 aa11.76□□□□□ -0.53
USP3-213ENST00000559711 CDHR4A6H8M9 788 aa11.76□□□□□ -0.53
USP3-213ENST00000559711 CLDN24A6NM45 220 aa11.76□□□□□ -0.53
USP3-213ENST00000559711 D6RAR5 112 aa11.76□□□□□ -0.53
USP3-213ENST00000559711 PEX12O00623 359 aa11.76□□□□□ -0.53
USP3-213ENST00000559711 FRS3O43559 492 aa11.76□□□□□ -0.53
USP3-213ENST00000559711 DYRK3O43781 588 aa11.76□□□□□ -0.53
USP3-213ENST00000559711 CYP7B1O75881 506 aa11.76□□□□□ -0.53
USP3-213ENST00000559711 IGKV1D-16P01601 117 aa11.76□□□□□ -0.53
USP3-213ENST00000559711 IGKV3-11P04433 115 aa11.76□□□□□ -0.53
USP3-213ENST00000559711 LINGO3P0C6S8 592 aa11.76□□□□□ -0.53
USP3-213ENST00000559711 CCNYL3P0C7X3 344 aa11.76□□□□□ -0.53
USP3-213ENST00000559711 CRHBPP24387 322 aa11.76□□□□□ -0.53
USP3-213ENST00000559711 GRK6P43250 576 aa11.76□□□□□ -0.53
USP3-213ENST00000559711 HLCSP50747 726 aa11.76□□□□□ -0.53
USP3-213ENST00000559711 ZNF136P52737 540 aa11.76□□□□□ -0.53
USP3-213ENST00000559711 CDH15P55291 814 aa11.76□□□□□ -0.53
USP3-213ENST00000559711 SLC37A1P57057 533 aa11.76□□□□□ -0.53
USP3-213ENST00000559711 RGS8P57771 180 aaPredicted RBP11.76□□□□□ -0.53
USP3-213ENST00000559711 ESRRGP62508 458 aa11.76□□□□□ -0.53
USP3-213ENST00000559711 ZFP36L1Q07352 338 aaKnown RBP11.76□□□□□ -0.53
USP3-213ENST00000559711 CDK5R2Q13319 367 aa11.76□□□□□ -0.53
USP3-213ENST00000559711 TOP3AQ13472 1001 aaPredicted RBP11.76□□□□□ -0.53
USP3-213ENST00000559711 TRA2AQ13595 282 aaKnown RBP eCLIP11.76□□□□□ -0.53
USP3-213ENST00000559711 PLA2G2CQ5R387 149 aa11.76□□□□□ -0.53
USP3-213ENST00000559711 PWWP2BQ6NUJ5 590 aa11.76□□□□□ -0.53
USP3-213ENST00000559711 PODNL1Q6PEZ8 512 aa11.76□□□□□ -0.53
USP3-213ENST00000559711 ZC3H14Q6PJT7 736 aaKnown RBP11.76□□□□□ -0.53
USP3-213ENST00000559711 CD300LDQ6UXZ3 194 aa11.76□□□□□ -0.53
USP3-213ENST00000559711 ZAR1Q86SH2 424 aa11.76□□□□□ -0.53
USP3-213ENST00000559711 CCDC71Q8IV32 467 aaPredicted RBP11.76□□□□□ -0.53
USP3-213ENST00000559711 ZSCAN1Q8NBB4 408 aa11.76□□□□□ -0.53
USP3-213ENST00000559711 SLC38A9Q8NBW4 561 aa11.76□□□□□ -0.53
USP3-213ENST00000559711 MORN4Q8NDC4 146 aa11.76□□□□□ -0.53
USP3-213ENST00000559711 OR4N2Q8NGD1 307 aa11.76□□□□□ -0.53
USP3-213ENST00000559711 ZNF566Q969W8 418 aa11.76□□□□□ -0.53
USP3-213ENST00000559711 VN1R1Q9GZP7 353 aa11.76□□□□□ -0.53
USP3-213ENST00000559711 SYNDIG1Q9H7V2 258 aa11.76□□□□□ -0.53
USP3-213ENST00000559711 EVA1AQ9H8M9 152 aa11.76□□□□□ -0.53
USP3-213ENST00000559711 Q9N2J8 555 aa11.76□□□□□ -0.53
USP3-213ENST00000559711 PCDHGA6Q9Y5G7 932 aa11.76□□□□□ -0.53
USP3-213ENST00000559711 NPIPB9F8W1W9 429 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 AP3D1O14617 1153 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 OR10H3O60404 316 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 SCRG1O75711 98 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 OR5F1O95221 314 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 TIAF1O95411 115 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 DDAH2O95865 285 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 GP1BAP07359 652 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 HBQ1P09105 142 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 IFNA8P32881 189 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 GGT2P36268 569 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 NUP107P57740 925 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 TAS2R41P59536 307 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 CXCR4P61073 352 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 IL5RAQ01344 420 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 ST3GAL3Q11203 375 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 NSDHLQ15738 373 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 FLYWCH1Q4VC44 716 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 MFSD4BQ5TF39 518 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 FOXB2Q5VYV0 432 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 TCEAL6Q6IPX3 200 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 PGBD2Q6P3X8 592 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 KLHL17Q6TDP4 642 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 LAPTM4BQ86VI4 370 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 TOR1AIP2Q8NFQ8 470 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 TCEAL3Q969E4 200 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 GTPBP3Q969Y2 492 aaKnown RBP11.75□□□□□ -0.53
USP3-213ENST00000559711 SLC46A1Q96NT5 459 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 MCHR1Q99705 422 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 G6PC3Q9BUM1 346 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 PRR14Q9BWN1 585 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 UCK2Q9BZX2 261 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 SLC7A5P2Q9GIP4 190 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 POLR2J2Q9GZM3 115 aaKnown RBP11.75□□□□□ -0.53
USP3-213ENST00000559711 POLR2J3Q9H1A7 115 aaKnown RBP11.75□□□□□ -0.53
USP3-213ENST00000559711 ARMC7Q9H6L4 198 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 NDUFA13Q9P0J0 144 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 REV1Q9UBZ9 1251 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 CFL2Q9Y281 166 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 PCDHGA10Q9Y5H3 936 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 CLCA3PQ9Y6N3 262 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 FRYLO94915 3013 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 NPIPA5A0A0B4J1W7 369 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 SMIM31A0A1B0GVY4 71 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 NPIPA7E9PJI5 369 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 FMO6PO60774 539 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 LDOC1O95751 146 aaPredicted RBP11.75□□□□□ -0.53
USP3-213ENST00000559711 CCDC159P0C7I6 412 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 NPIPA8P0DM63 369 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 ATXN8OSP0DMR3 200 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 FGF5P12034 268 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 POU2F1P14859 743 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 DRD5P21918 477 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 ACP1P24666 158 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 PPICP45877 212 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 ALDH3B2P48448 385 aa11.75□□□□□ -0.53
USP3-213ENST00000559711 COX10Q12887 443 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms