RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 APOBEC4Q8WW27 367 aaKnown RBP15.32■□□□□ 0.04
TPM1-219ENST00000559397 GEMIN6Q8WXD5 167 aaKnown RBP15.32■□□□□ 0.04
TPM1-219ENST00000559397 THAP4Q8WY91 577 aa15.32■□□□□ 0.04
TPM1-219ENST00000559397 ART5Q96L15 291 aa15.32■□□□□ 0.04
TPM1-219ENST00000559397 NR1H4Q96RI1 486 aaPredicted RBP15.32■□□□□ 0.04
TPM1-219ENST00000559397 NUDT9Q9BW91 350 aa15.32■□□□□ 0.04
TPM1-219ENST00000559397 SEMA4CQ9C0C4 833 aa15.32■□□□□ 0.04
TPM1-219ENST00000559397 OR8D2Q9GZM6 311 aa15.32■□□□□ 0.04
TPM1-219ENST00000559397 Q9H521 79 aa15.32■□□□□ 0.04
TPM1-219ENST00000559397 RUBCNLQ9H714 662 aa15.32■□□□□ 0.04
TPM1-219ENST00000559397 ZNF160Q9HCG1 818 aa15.32■□□□□ 0.04
TPM1-219ENST00000559397 VNN3Q9NY84 501 aa15.32■□□□□ 0.04
TPM1-219ENST00000559397 NDUFAF4Q9P032 175 aa15.32■□□□□ 0.04
TPM1-219ENST00000559397 ZNF223Q9UK11 482 aaPredicted RBP15.32■□□□□ 0.04
TPM1-219ENST00000559397 LOC400499M0QZD8 3231 aa15.31■□□□□ 0.04
TPM1-219ENST00000559397 DUXAA6NLW8 204 aa15.31■□□□□ 0.04
TPM1-219ENST00000559397 G3V2T6 193 aa15.31■□□□□ 0.04
TPM1-219ENST00000559397 MASP2O00187 686 aa15.31■□□□□ 0.04
TPM1-219ENST00000559397 AGR2O95994 175 aa15.31■□□□□ 0.04
TPM1-219ENST00000559397 CHRM4P08173 479 aa15.31■□□□□ 0.04
TPM1-219ENST00000559397 PRKAR1AP10644 381 aa15.31■□□□□ 0.04
TPM1-219ENST00000559397 ETS2P15036 469 aa15.31■□□□□ 0.04
TPM1-219ENST00000559397 CRISP3P54108 245 aa15.31■□□□□ 0.04
TPM1-219ENST00000559397 CDC20Q12834 499 aa15.31■□□□□ 0.04
TPM1-219ENST00000559397 DAG1Q14118 895 aa15.31■□□□□ 0.04
TPM1-219ENST00000559397 EXOSC7Q15024 291 aaKnown RBP15.31■□□□□ 0.04
TPM1-219ENST00000559397 DUSP7Q16829 419 aa15.31■□□□□ 0.04
TPM1-219ENST00000559397 C6orf52Q5T4I8 152 aa15.31■□□□□ 0.04
TPM1-219ENST00000559397 PLAG1Q6DJT9 500 aa15.31■□□□□ 0.04
TPM1-219ENST00000559397 ZCCHC12Q6PEW1 402 aa15.31■□□□□ 0.04
TPM1-219ENST00000559397 OR7G1Q8NGA0 311 aa15.31■□□□□ 0.04
TPM1-219ENST00000559397 GPR32P1Q8NGA4 272 aa15.31■□□□□ 0.04
TPM1-219ENST00000559397 SLC35A4Q96G79 324 aa15.31■□□□□ 0.04
TPM1-219ENST00000559397 TRNT1Q96Q11 434 aaKnown RBP15.31■□□□□ 0.04
TPM1-219ENST00000559397 ZNF607Q96SK3 696 aa15.31■□□□□ 0.04
TPM1-219ENST00000559397 OR10A5Q9H207 317 aa15.31■□□□□ 0.04
TPM1-219ENST00000559397 EQTNQ9NQ60 294 aa15.31■□□□□ 0.04
TPM1-219ENST00000559397 GIN1Q9NXP7 522 aa15.31■□□□□ 0.04
TPM1-219ENST00000559397 USE1Q9NZ43 259 aa15.31■□□□□ 0.04
TPM1-219ENST00000559397 BAG5Q9UL15 447 aa15.31■□□□□ 0.04
TPM1-219ENST00000559397 IGF2RP11717 2491 aa15.3■□□□□ 0.04
TPM1-219ENST00000559397 A0A087WV48 116 aa15.3■□□□□ 0.04
TPM1-219ENST00000559397 A0A0G2JPF8 293 aa15.3■□□□□ 0.04
TPM1-219ENST00000559397 HNRNPCL2B2RXH8 293 aa15.3■□□□□ 0.04
TPM1-219ENST00000559397 HNRNPCL3B7ZW38 293 aa15.3■□□□□ 0.04
TPM1-219ENST00000559397 HPRP00739 348 aa15.3■□□□□ 0.04
TPM1-219ENST00000559397 ALPLP05186 524 aa15.3■□□□□ 0.04
TPM1-219ENST00000559397 HNRNPCL4P0DMR1 293 aa15.3■□□□□ 0.04
TPM1-219ENST00000559397 MAP3K8P41279 467 aa15.3■□□□□ 0.04
TPM1-219ENST00000559397 KCNJ5P48544 419 aa15.3■□□□□ 0.04
TPM1-219ENST00000559397 ALDH3A2P51648 485 aa15.3■□□□□ 0.04
TPM1-219ENST00000559397 SLC37A1P57057 533 aa15.3■□□□□ 0.04
TPM1-219ENST00000559397 Q0VFX4 171 aa15.3■□□□□ 0.04
TPM1-219ENST00000559397 EXT1Q16394 746 aa15.3■□□□□ 0.04
TPM1-219ENST00000559397 SHQ1Q6PI26 577 aaKnown RBP15.3■□□□□ 0.04
TPM1-219ENST00000559397 STK32CQ86UX6 486 aa15.3■□□□□ 0.04
TPM1-219ENST00000559397 HIPK1Q86Z02 1210 aa15.3■□□□□ 0.04
TPM1-219ENST00000559397 SMYD1Q8NB12 490 aa15.3■□□□□ 0.04
TPM1-219ENST00000559397 OR52R1Q8NGF1 315 aa15.3■□□□□ 0.04
TPM1-219ENST00000559397 M1APQ8TC57 530 aa15.3■□□□□ 0.04
TPM1-219ENST00000559397 SPPL2AQ8TCT8 520 aa15.3■□□□□ 0.04
TPM1-219ENST00000559397 ELP5Q8TE02 316 aa15.3■□□□□ 0.04
TPM1-219ENST00000559397 ZCCHC14Q8WYQ9 949 aaKnown RBP15.3■□□□□ 0.04
TPM1-219ENST00000559397 TFAP2CQ92754 450 aa15.3■□□□□ 0.04
TPM1-219ENST00000559397 HOXB13Q92826 284 aaPredicted RBP15.3■□□□□ 0.04
TPM1-219ENST00000559397 NRBF2Q96F24 287 aa15.3■□□□□ 0.04
TPM1-219ENST00000559397 OTUB1Q96FW1 271 aaPredicted RBP15.3■□□□□ 0.04
TPM1-219ENST00000559397 VMP1Q96GC9 406 aa15.3■□□□□ 0.04
TPM1-219ENST00000559397 BTBD2Q9BX70 525 aa15.3■□□□□ 0.04
TPM1-219ENST00000559397 OSBPL10Q9BXB5 764 aa15.3■□□□□ 0.04
TPM1-219ENST00000559397 MMP25Q9NPA2 562 aa15.3■□□□□ 0.04
TPM1-219ENST00000559397 MAGED1Q9Y5V3 778 aaPredicted RBP15.3■□□□□ 0.04
TPM1-219ENST00000559397 DSPPQ9NZW4 1301 aa15.29■□□□□ 0.04
TPM1-219ENST00000559397 TMEM8BA6NDV4 472 aa15.29■□□□□ 0.04
TPM1-219ENST00000559397 SERPINB7O75635 380 aa15.29■□□□□ 0.04
TPM1-219ENST00000559397 DIRAS1O95057 198 aa15.29■□□□□ 0.04
TPM1-219ENST00000559397 CELA2AP08217 269 aa15.29■□□□□ 0.04
TPM1-219ENST00000559397 ACP2P11117 423 aa15.29■□□□□ 0.04
TPM1-219ENST00000559397 EMDP50402 254 aa15.29■□□□□ 0.04
TPM1-219ENST00000559397 PPP2R2BQ00005 443 aa15.29■□□□□ 0.04
TPM1-219ENST00000559397 BTBD16Q32M84 506 aa15.29■□□□□ 0.04
TPM1-219ENST00000559397 DCAF10Q5QP82 559 aa15.29■□□□□ 0.04
TPM1-219ENST00000559397 OTUD3Q5T2D3 398 aaPredicted RBP15.29■□□□□ 0.04
TPM1-219ENST00000559397 CCDC81Q6ZN84 652 aa15.29■□□□□ 0.04
TPM1-219ENST00000559397 LRRC69Q6ZNQ3 347 aa15.29■□□□□ 0.04
TPM1-219ENST00000559397 KRT73Q86Y46 540 aa15.29■□□□□ 0.04
TPM1-219ENST00000559397 KDF1Q8NAX2 398 aaPredicted RBP15.29■□□□□ 0.04
TPM1-219ENST00000559397 SLC16A11Q8NCK7 471 aa15.29■□□□□ 0.04
TPM1-219ENST00000559397 ADAMTS15Q8TE58 950 aa15.29■□□□□ 0.04
TPM1-219ENST00000559397 RASSF5Q8WWW0 418 aa15.29■□□□□ 0.04
TPM1-219ENST00000559397 FER1L6-AS2Q96M78 137 aa15.29■□□□□ 0.04
TPM1-219ENST00000559397 COL21A1Q96P44 957 aa15.29■□□□□ 0.04
TPM1-219ENST00000559397 ZNF300Q96RE9 604 aaPredicted RBP15.29■□□□□ 0.04
TPM1-219ENST00000559397 ZNF347Q96SE7 839 aa15.29■□□□□ 0.04
TPM1-219ENST00000559397 GABARAPL1Q9H0R8 117 aa15.29■□□□□ 0.04
TPM1-219ENST00000559397 SLC38A1Q9H2H9 487 aa15.29■□□□□ 0.04
TPM1-219ENST00000559397 EXD2Q9NVH0 621 aa15.29■□□□□ 0.04
TPM1-219ENST00000559397 CALML5Q9NZT1 146 aa15.29■□□□□ 0.04
TPM1-219ENST00000559397 NME6O75414 186 aaPredicted RBP15.28■□□□□ 0.04
TPM1-219ENST00000559397 E2F6O75461 281 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms