RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 MORN4Q8NDC4 146 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 SETD9Q8NE22 299 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 OR52P1PQ8NH57 321 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.03□□□□□ -0.48
SMAD3-207ENST00000558763 DIO2Q92813 273 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 GTPBP3Q969Y2 492 aaKnown RBP12.03□□□□□ -0.48
SMAD3-207ENST00000558763 ZNF501Q96CX3 271 aaPredicted RBP12.03□□□□□ -0.48
SMAD3-207ENST00000558763 VSTM2LQ96N03 204 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 LMF2Q9BU23 707 aaKnown RBP12.03□□□□□ -0.48
SMAD3-207ENST00000558763 PRR14Q9BWN1 585 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 ALOXE3Q9BYJ1 711 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 NECTIN3Q9NQS3 549 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 REV1Q9UBZ9 1251 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 MRPS33Q9Y291 106 aaKnown RBP12.03□□□□□ -0.48
SMAD3-207ENST00000558763 CEPT1Q9Y6K0 416 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 FAAHO00519 579 aa12.02□□□□□ -0.49
SMAD3-207ENST00000558763 OR10H2O60403 315 aa12.02□□□□□ -0.49
SMAD3-207ENST00000558763 ADAP00813 363 aa12.02□□□□□ -0.49
SMAD3-207ENST00000558763 TP53P04637 393 aaPredicted RBP12.02□□□□□ -0.49
SMAD3-207ENST00000558763 ALOX5P09917 674 aa12.02□□□□□ -0.49
SMAD3-207ENST00000558763 ANKRD34CP0C6C1 535 aa12.02□□□□□ -0.49
SMAD3-207ENST00000558763 CCDC159P0C7I6 412 aa12.02□□□□□ -0.49
SMAD3-207ENST00000558763 POU2F1P14859 743 aa12.02□□□□□ -0.49
SMAD3-207ENST00000558763 SSTR4P31391 388 aa12.02□□□□□ -0.49
SMAD3-207ENST00000558763 TRHRP34981 398 aaPredicted RBP12.02□□□□□ -0.49
SMAD3-207ENST00000558763 GGT2P36268 569 aa12.02□□□□□ -0.49
SMAD3-207ENST00000558763 STT3AP46977 705 aa12.02□□□□□ -0.49
SMAD3-207ENST00000558763 AVPR1BP47901 424 aa12.02□□□□□ -0.49
SMAD3-207ENST00000558763 HSD17B7P56937 341 aa12.02□□□□□ -0.49
SMAD3-207ENST00000558763 GABARAPL2P60520 117 aa12.02□□□□□ -0.49
SMAD3-207ENST00000558763 IL5RAQ01344 420 aa12.02□□□□□ -0.49
SMAD3-207ENST00000558763 CLPPQ16740 277 aaPredicted RBP12.02□□□□□ -0.49
SMAD3-207ENST00000558763 FGD3Q5JSP0 725 aa12.02□□□□□ -0.49
SMAD3-207ENST00000558763 XAF1Q6GPH4 301 aa12.02□□□□□ -0.49
SMAD3-207ENST00000558763 PGBD2Q6P3X8 592 aa12.02□□□□□ -0.49
SMAD3-207ENST00000558763 GLRX5Q86SX6 157 aa12.02□□□□□ -0.49
SMAD3-207ENST00000558763 SLCO6A1Q86UG4 719 aa12.02□□□□□ -0.49
SMAD3-207ENST00000558763 KMT5CQ86Y97 462 aa12.02□□□□□ -0.49
SMAD3-207ENST00000558763 NLGN4XQ8N0W4 816 aa12.02□□□□□ -0.49
SMAD3-207ENST00000558763 TAGAPQ8N103 731 aa12.02□□□□□ -0.49
SMAD3-207ENST00000558763 MTHFD2LQ9H903 347 aaPredicted RBP12.02□□□□□ -0.49
SMAD3-207ENST00000558763 NDUFA13Q9P0J0 144 aa12.02□□□□□ -0.49
SMAD3-207ENST00000558763 MAU2Q9Y6X3 613 aa12.02□□□□□ -0.49
SMAD3-207ENST00000558763 PCNX2A6NKB5 2137 aa12.02□□□□□ -0.49
SMAD3-207ENST00000558763 XPNPEP2O43895 674 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 UGT2B17O75795 530 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 OXSR1O95747 527 aaPredicted RBP12.01□□□□□ -0.49
SMAD3-207ENST00000558763 THY1P04216 161 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 GABRB1P18505 474 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 ZNF136P52737 540 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 TPD52P55327 224 aaPredicted RBP12.01□□□□□ -0.49
SMAD3-207ENST00000558763 HPCAP84074 193 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 E2F1Q01094 437 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 FUT7Q11130 342 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 SMN1Q16637 294 aaKnown RBP12.01□□□□□ -0.49
SMAD3-207ENST00000558763 DCST1Q5T197 706 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 PODNL1Q6PEZ8 512 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 NPSR1Q6W5P4 371 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 TTLL10Q6ZVT0 673 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 ZNF619Q8N2I2 560 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 COX18Q8N8Q8 333 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 ZSCAN1Q8NBB4 408 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 RIT1Q92963 219 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 MVB12AQ96EY5 273 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 RHNO1Q9BSD3 238 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 ADNPQ9H2P0 1102 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 FOLH1BQ9HBA9 442 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 DHCR7Q9UBM7 475 aaKnown RBP12.01□□□□□ -0.49
SMAD3-207ENST00000558763 RNF6Q9Y252 685 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 PCDHGA1Q9Y5H4 931 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 HEMK1Q9Y5R4 338 aaPredicted RBP12.01□□□□□ -0.49
SMAD3-207ENST00000558763 IGKV3D-11A0A0A0MRZ8 115 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 PEX12O00623 359 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 BRINP1O60477 761 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 COQ9O75208 318 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 BCAS1O75363 584 aaPredicted RBP12.01□□□□□ -0.49
SMAD3-207ENST00000558763 STX11O75558 287 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 ANGPTL1O95841 491 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 IGKV1D-16P01601 117 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 THBS1P07996 1170 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 FTH1P19P0C7X4 201 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 FMO3P31513 532 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 KRT20P35900 424 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 OR1D4P47884 311 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 NOVA1P51513 510 aaKnown RBP12.01□□□□□ -0.49
SMAD3-207ENST00000558763 NUP107P57740 925 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 CXCR4P61073 352 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 SLC35A2P78381 396 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 PIGFQ07326 219 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 ZFP36L1Q07352 338 aaKnown RBP12.01□□□□□ -0.49
SMAD3-207ENST00000558763 STX4Q12846 297 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 FOXD4Q12950 439 aaPredicted RBP12.01□□□□□ -0.49
SMAD3-207ENST00000558763 FIGNL1Q6PIW4 674 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 CCDC103Q8IW40 242 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 RNF31Q96EP0 1072 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 SIGLEC11Q96RL6 698 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 GPA33Q99795 319 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 APOL4Q9BPW4 351 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 DGCR6LQ9BY27 220 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 YIPF3Q9GZM5 350 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms