RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 RPL38P63173 70 aaKnown RBP13.89□□□□□ -0.19
RPL28-206ENST00000558752 LTBQ06643 244 aa13.89□□□□□ -0.19
RPL28-206ENST00000558752 PDE7AQ13946 482 aa13.89□□□□□ -0.19
RPL28-206ENST00000558752 MLC1Q15049 377 aa13.89□□□□□ -0.19
RPL28-206ENST00000558752 ZNHIT3Q15649 155 aaPredicted RBP13.89□□□□□ -0.19
RPL28-206ENST00000558752 GALNTL6Q49A17 601 aa13.89□□□□□ -0.19
RPL28-206ENST00000558752 XKR7Q5GH72 579 aa13.89□□□□□ -0.19
RPL28-206ENST00000558752 SHEQ5VZ18 495 aa13.89□□□□□ -0.19
RPL28-206ENST00000558752 PRR22Q8IZ63 422 aa13.89□□□□□ -0.19
RPL28-206ENST00000558752 SIMC1Q8NDZ2 872 aa13.89□□□□□ -0.19
RPL28-206ENST00000558752 MBD3L2Q8NHZ7 208 aaPredicted RBP13.89□□□□□ -0.19
RPL28-206ENST00000558752 ABTB1Q969K4 478 aaPredicted RBP13.89□□□□□ -0.19
RPL28-206ENST00000558752 TMBIM1Q969X1 311 aa13.89□□□□□ -0.19
RPL28-206ENST00000558752 PKNOX2Q96KN3 472 aa13.89□□□□□ -0.19
RPL28-206ENST00000558752 DACH2Q96NX9 599 aa13.89□□□□□ -0.19
RPL28-206ENST00000558752 TM9SF2Q99805 663 aa13.89□□□□□ -0.19
RPL28-206ENST00000558752 FOLH1BQ9HBA9 442 aa13.89□□□□□ -0.19
RPL28-206ENST00000558752 C3orf14Q9HBI5 128 aa13.89□□□□□ -0.19
RPL28-206ENST00000558752 HHATLQ9HCP6 504 aa13.89□□□□□ -0.19
RPL28-206ENST00000558752 DDX18Q9NVP1 670 aaKnown RBP13.89□□□□□ -0.19
RPL28-206ENST00000558752 SH3BP4Q9P0V3 963 aa13.89□□□□□ -0.19
RPL28-206ENST00000558752 NTMQ9P121 344 aa13.89□□□□□ -0.19
RPL28-206ENST00000558752 C15orf41Q9Y2V0 281 aa13.89□□□□□ -0.19
RPL28-206ENST00000558752 PTGDR2Q9Y5Y4 395 aa13.89□□□□□ -0.19
RPL28-206ENST00000558752 MPDZO75970 2070 aa13.89□□□□□ -0.19
RPL28-206ENST00000558752 UPK1AO00322 258 aa13.88□□□□□ -0.19
RPL28-206ENST00000558752 PDPK1O15530 556 aa13.88□□□□□ -0.19
RPL28-206ENST00000558752 ICOSLGO75144 302 aa13.88□□□□□ -0.19
RPL28-206ENST00000558752 PEX11AO75192 247 aa13.88□□□□□ -0.19
RPL28-206ENST00000558752 CBR3O75828 277 aa13.88□□□□□ -0.19
RPL28-206ENST00000558752 INHBBP09529 407 aa13.88□□□□□ -0.19
RPL28-206ENST00000558752 BMP7P18075 431 aa13.88□□□□□ -0.19
RPL28-206ENST00000558752 FRKP42685 505 aaPredicted RBP13.88□□□□□ -0.19
RPL28-206ENST00000558752 PSMD4P55036 377 aaKnown RBP13.88□□□□□ -0.19
RPL28-206ENST00000558752 CHI3L2Q15782 390 aa13.88□□□□□ -0.19
RPL28-206ENST00000558752 PRSS53Q2L4Q9 553 aa13.88□□□□□ -0.19
RPL28-206ENST00000558752 C6orf136Q5SQH8 315 aa13.88□□□□□ -0.19
RPL28-206ENST00000558752 ZCCHC12Q6PEW1 402 aa13.88□□□□□ -0.19
RPL28-206ENST00000558752 SLC44A2Q8IWA5 706 aaPredicted RBP13.88□□□□□ -0.19
RPL28-206ENST00000558752 OR1J4Q8NGS1 313 aa13.88□□□□□ -0.19
RPL28-206ENST00000558752 LINC01560Q8TB33 94 aa13.88□□□□□ -0.19
RPL28-206ENST00000558752 ZPLD1Q8TCW7 415 aa13.88□□□□□ -0.19
RPL28-206ENST00000558752 TSSK3Q96PN8 268 aa13.88□□□□□ -0.19
RPL28-206ENST00000558752 UGT2B28Q9BY64 529 aa13.88□□□□□ -0.19
RPL28-206ENST00000558752 UBQLN3Q9H347 655 aa13.88□□□□□ -0.19
RPL28-206ENST00000558752 ATAD3AQ9NVI7 634 aa13.88□□□□□ -0.19
RPL28-206ENST00000558752 NDRG3Q9UGV2 375 aa13.88□□□□□ -0.19
RPL28-206ENST00000558752 BAIAP2L1Q9UHR4 511 aa13.88□□□□□ -0.19
RPL28-206ENST00000558752 ATP6V1HQ9UI12 483 aa13.88□□□□□ -0.19
RPL28-206ENST00000558752 EIF3LQ9Y262 564 aaKnown RBP13.88□□□□□ -0.19
RPL28-206ENST00000558752 SLC6A5Q9Y345 797 aa13.88□□□□□ -0.19
RPL28-206ENST00000558752 RAP2CQ9Y3L5 183 aa13.88□□□□□ -0.19
RPL28-206ENST00000558752 OR10H1Q9Y4A9 318 aa13.88□□□□□ -0.19
RPL28-206ENST00000558752 TMEM233B4DJY2 109 aa13.87□□□□□ -0.19
RPL28-206ENST00000558752 AKAP10O43572 662 aa13.87□□□□□ -0.19
RPL28-206ENST00000558752 TSPAN2O60636 221 aa13.87□□□□□ -0.19
RPL28-206ENST00000558752 UGT2B11O75310 529 aa13.87□□□□□ -0.19
RPL28-206ENST00000558752 LRATO95237 230 aa13.87□□□□□ -0.19
RPL28-206ENST00000558752 PSMG1O95456 288 aa13.87□□□□□ -0.19
RPL28-206ENST00000558752 TMIGD3P0DMS9 266 aaPredicted RBP13.87□□□□□ -0.19
RPL28-206ENST00000558752 PRPS1L1P21108 318 aa13.87□□□□□ -0.19
RPL28-206ENST00000558752 IL12BP29460 328 aa13.87□□□□□ -0.19
RPL28-206ENST00000558752 GPC1P35052 558 aa13.87□□□□□ -0.19
RPL28-206ENST00000558752 HPCAL1P37235 193 aa13.87□□□□□ -0.19
RPL28-206ENST00000558752 MC3RP41968 323 aa13.87□□□□□ -0.19
RPL28-206ENST00000558752 CPA2P48052 419 aa13.87□□□□□ -0.19
RPL28-206ENST00000558752 RPL14P50914 215 aaKnown RBP13.87□□□□□ -0.19
RPL28-206ENST00000558752 DIO3P55073 304 aa13.87□□□□□ -0.19
RPL28-206ENST00000558752 NKX6-1P78426 367 aaPredicted RBP13.87□□□□□ -0.19
RPL28-206ENST00000558752 PSG6Q00889 435 aa13.87□□□□□ -0.19
RPL28-206ENST00000558752 EMX2Q04743 252 aa13.87□□□□□ -0.19
RPL28-206ENST00000558752 STX3Q13277 289 aa13.87□□□□□ -0.19
RPL28-206ENST00000558752 DECR1Q16698 335 aa13.87□□□□□ -0.19
RPL28-206ENST00000558752 VPS26BQ4G0F5 336 aa13.87□□□□□ -0.19
RPL28-206ENST00000558752 BEND6Q5SZJ8 279 aaPredicted RBP13.87□□□□□ -0.19
RPL28-206ENST00000558752 POMZP3Q6PJE2 187 aa13.87□□□□□ -0.19
RPL28-206ENST00000558752 ENPP6Q6UWR7 440 aa13.87□□□□□ -0.19
RPL28-206ENST00000558752 TMEM107Q6UX40 140 aa13.87□□□□□ -0.19
RPL28-206ENST00000558752 LARP4Q71RC2 724 aaKnown RBP eCLIP13.87□□□□□ -0.197e-49■■□□□ 12.5
RPL28-206ENST00000558752 LRRC34Q8IZ02 419 aa13.87□□□□□ -0.19
RPL28-206ENST00000558752 FNDC5Q8NAU1 212 aa13.87□□□□□ -0.19
RPL28-206ENST00000558752 WFDC11Q8NEX6 87 aa13.87□□□□□ -0.19
RPL28-206ENST00000558752 SMPDL3BQ92485 455 aa13.87□□□□□ -0.19
RPL28-206ENST00000558752 TUBGCP3Q96CW5 907 aa13.87□□□□□ -0.19
RPL28-206ENST00000558752 GNRHR2Q96P88 292 aa13.87□□□□□ -0.19
RPL28-206ENST00000558752 ADOQ96SZ5 270 aa13.87□□□□□ -0.19
RPL28-206ENST00000558752 SFXN3Q9BWM7 321 aa13.87□□□□□ -0.19
RPL28-206ENST00000558752 OSBPL11Q9BXB4 747 aa13.87□□□□□ -0.19
RPL28-206ENST00000558752 PLEKHF2Q9H8W4 249 aa13.87□□□□□ -0.19
RPL28-206ENST00000558752 Q9N2J8 555 aa13.87□□□□□ -0.19
RPL28-206ENST00000558752 JKAMPQ9P055 326 aa13.87□□□□□ -0.19
RPL28-206ENST00000558752 HAO1Q9UJM8 370 aa13.87□□□□□ -0.19
RPL28-206ENST00000558752 MRPS18CQ9Y3D5 142 aaKnown RBP13.87□□□□□ -0.19
RPL28-206ENST00000558752 FLNAP21333 2647 aaKnown RBP13.87□□□□□ -0.19
RPL28-206ENST00000558752 FREM3P0C091 2139 aa13.87□□□□□ -0.19
RPL28-206ENST00000558752 WDR91A4D1P6 747 aa13.86□□□□□ -0.19
RPL28-206ENST00000558752 PRAMEF25A6NGN4 478 aa13.86□□□□□ -0.19
RPL28-206ENST00000558752 SNPHO15079 494 aa13.86□□□□□ -0.19
RPL28-206ENST00000558752 CHMP24386 653 aa13.86□□□□□ -0.19
RPL28-206ENST00000558752 HOXC12P31275 282 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms