RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 BCL6P41182 706 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 SLC7A2P52569 658 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 ATP12AP54707 1039 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 DIO3P55073 304 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 CDH15P55291 814 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 RNF4P78317 190 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 INSM1Q01101 510 aaPredicted RBP3.81□□□□□ -1.8
ZEB1-212ENST00000558655 MC2RQ01718 297 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 EIF3IQ13347 325 aaKnown RBP3.81□□□□□ -1.8
ZEB1-212ENST00000558655 TSTA3Q13630 321 aaPredicted RBP3.81□□□□□ -1.8
ZEB1-212ENST00000558655 KIAA0040Q15053 153 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 PDK3Q15120 406 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 TESK1Q15569 626 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 ARSJQ5FYB0 599 aaPredicted RBP3.81□□□□□ -1.8
ZEB1-212ENST00000558655 EXOSC6Q5RKV6 272 aaKnown RBP3.81□□□□□ -1.8
ZEB1-212ENST00000558655 PRAMEF20Q5VT98 475 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 REP15Q6BDI9 236 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 TMIGD1Q6UXZ0 262 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 RBM44Q6ZP01 1051 aaKnown RBP3.81□□□□□ -1.8
ZEB1-212ENST00000558655 LARP4Q71RC2 724 aaKnown RBP eCLIP3.81□□□□□ -1.8
ZEB1-212ENST00000558655 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.81□□□□□ -1.8
ZEB1-212ENST00000558655 TMPRSS9Q7Z410 1059 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 SPATA19Q7Z5L4 167 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 ARPINQ7Z6K5 226 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 TMPRSS11BQ86T26 416 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 ZFAND4Q86XD8 727 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 ST13P4Q8IZP2 240 aaPredicted RBP3.81□□□□□ -1.8
ZEB1-212ENST00000558655 OFCC1Q8IZS5 231 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 PQLC1Q8N2U9 271 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 METTL4Q8N3J2 472 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 CPSF7Q8N684 471 aaKnown RBP3.81□□□□□ -1.8
ZEB1-212ENST00000558655 TWIST2Q8WVJ9 160 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 CMTM7Q96FZ5 175 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 C1orf159Q96HA4 380 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 LRFN5Q96NI6 719 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 SLC29A1Q99808 456 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 DDA1Q9BW61 102 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 C1orf43Q9BWL3 253 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 NPLQ9BXD5 320 aaPredicted RBP3.81□□□□□ -1.8
ZEB1-212ENST00000558655 ZNF717Q9BY31 904 aaPredicted RBP3.81□□□□□ -1.8
ZEB1-212ENST00000558655 ROGDIQ9GZN7 287 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 AICDAQ9GZX7 198 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 RMND5AQ9H871 391 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 CIDEBQ9UHD4 219 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 PTRH2Q9Y3E5 179 aaKnown RBP3.81□□□□□ -1.8
ZEB1-212ENST00000558655 SLC22A7Q9Y694 548 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 IGHV5-51A0A0C4DH38 117 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 C2orf92A0A1B0GVN3 265 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 MAGEA13PA6NCF6 341 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 PCDH17O14917 1159 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 UBDO15205 165 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 RGS14O43566 566 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 RHBDL1O75783 438 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 CHEK2O96017 543 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 PDYNP01213 254 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 OPN1LWP04000 364 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 ITGA5P08648 1049 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 CLEC2LP0C7M8 214 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 CTRB1P17538 263 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 HMOX2P30519 316 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 GFERP55789 205 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 PSME3P61289 254 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 PPP1CAP62136 330 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 EMX2Q04743 252 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 PPP1R8Q12972 351 aaKnown RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 FAM53BQ14153 422 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 IL11RAQ14626 422 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 TRIP6Q15654 476 aaKnown RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 KIF26BQ2KJY2 2108 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 CNPY1Q3B7I2 92 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 SPIN4Q56A73 249 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 PIGGQ5H8A4 983 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 RABL3Q5HYI8 236 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 CTRB2Q6GPI1 263 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 TMEM214Q6NUQ4 689 aaKnown RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 Q6ZSR9 355 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 ASPGQ86U10 573 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 TMPRSS12Q86WS5 348 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 SPPL2CQ8IUH8 684 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 ZC3H7AQ8IWR0 971 aaKnown RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 CAMKVQ8NCB2 501 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 ZNF248Q8NDW4 579 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 BBS1Q8NFJ9 593 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 SETD6Q8TBK2 473 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 DNAJA4Q8WW22 397 aaPredicted RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 CFHR4Q92496 578 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 PPWD1Q96BP3 646 aaKnown RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 ZNF501Q96CX3 271 aaPredicted RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 PPP3R2Q96LZ3 170 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 MAP3K3Q99759 626 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 NUDT22Q9BRQ3 303 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 SPRTNQ9H040 489 aaPredicted RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 DDX31Q9H8H2 851 aaKnown RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 AKTIPQ9H8T0 292 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 ZFAND3Q9H8U3 227 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 SYNPO2LQ9H987 977 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 SLC35C2Q9NQQ7 365 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 RIC8BQ9NVN3 520 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 ACSL6Q9UKU0 697 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms