RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 DHTKD1Q96HY7 919 aaPredicted RBP2.38□□□□□ -2.03
SPG11-206ENST00000558093 CAPNS2Q96L46 248 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 FAM111AQ96PZ2 611 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 FAM173AQ9BQD7 235 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 RHOXF2Q9BQY4 288 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 GPR174Q9BXC1 333 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 SLC5A7Q9GZV3 580 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 IKZF5Q9H5V7 419 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 GORASP2Q9H8Y8 452 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 MAGEF1Q9HAY2 307 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 ESM1Q9NQ30 184 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 ZCCHC3Q9NUD5 404 aaKnown RBP2.38□□□□□ -2.03
SPG11-206ENST00000558093 SOHLH2Q9NX45 425 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 TMOD2Q9NZR1 351 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 KLRF1Q9NZS2 232 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 VPS54Q9P1Q0 977 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 ERVK-18Q9QC07 812 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 TUBGCP4Q9UGJ1 667 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 KLHL21Q9UJP4 597 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 FBXW2Q9UKT8 454 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 EMCNQ9ULC0 261 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 CLEC4AQ9UMR7 237 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 ABCG2Q9UNQ0 655 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 MOKQ9UQ07 419 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 CLCA3PQ9Y6N3 262 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 KIF7Q2M1P5 1343 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 MROH5Q6ZUA9 1318 aa2.38□□□□□ -2.03
SPG11-206ENST00000558093 A0A0A6YYD4 124 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 GOLGA6L7A0A1B0GV03 622 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 SMIM30A4D0T7 59 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 LRRD1A4D1F6 860 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 EEF2KO00418 725 aaKnown RBP2.37□□□□□ -2.03
SPG11-206ENST00000558093 MAPK13O15264 365 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 LYPD3O95274 346 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 DIRAS3O95661 229 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 PTBP3O95758 552 aaKnown RBP2.37□□□□□ -2.03
SPG11-206ENST00000558093 S100A9P06702 114 aaKnown RBP2.37□□□□□ -2.03
SPG11-206ENST00000558093 SERPINF2P08697 491 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 NCF1P14598 390 aaPredicted RBP2.37□□□□□ -2.03
SPG11-206ENST00000558093 CYP3A5P20815 502 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 IDSP22304 550 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 ACP1P24666 158 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 RPA1P27694 616 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 CCR1P32246 355 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 S100A5P33763 92 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 XCR1P46094 333 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 CASP9P55211 416 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 NUCB2P80303 420 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 ARF5P84085 180 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 NPRL3Q12980 569 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 CHIT1Q13231 466 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 ASAH1Q13510 395 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 EXOSC7Q15024 291 aaKnown RBP2.37□□□□□ -2.03
SPG11-206ENST00000558093 ISXQ2M1V0 245 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 HKDC1Q2TB90 917 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 CFAP221Q4G0U5 840 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 SLC39A12Q504Y0 691 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 FBXO48Q5FWF7 155 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 C9orf129Q5T035 196 aaKnown RBP2.37□□□□□ -2.03
SPG11-206ENST00000558093 C12orf60Q5U649 245 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 TMEM270Q6UE05 265 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 SPATA24Q86W54 205 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 ZNF321PQ8N8H1 164 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 LILRB4Q8NHJ6 448 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 LINC01006Q8NI28 216 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 URGCPQ8TCY9 931 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 TFB1MQ8WVM0 346 aaKnown RBP2.37□□□□□ -2.03
SPG11-206ENST00000558093 NCLNQ969V3 563 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 LRRC45Q96CN5 670 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 NUS1Q96E22 293 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 DTNBP1Q96EV8 351 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 ATP6V1G3Q96LB4 118 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 CATSPER2Q96P56 530 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 RIOK1Q9BRS2 568 aaKnown RBP2.37□□□□□ -2.03
SPG11-206ENST00000558093 UQCC2Q9BRT2 126 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 SIKE1Q9BRV8 207 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 TBCDQ9BTW9 1192 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 EDEM2Q9BV94 578 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 TRPV6Q9H1D0 765 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 CARD9Q9H257 536 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 XKR8Q9H6D3 395 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 FANCEQ9HB96 536 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 PALMDQ9NP74 551 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 MIEF1Q9NQG6 463 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 POLE3Q9NRF9 147 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 CENPMQ9NSP4 180 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 SPATA7Q9P0W8 599 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 DPM3Q9P2X0 92 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 NARFQ9UHQ1 456 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 PSME2Q9UL46 239 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 FOXA2Q9Y261 457 aaPredicted RBP2.37□□□□□ -2.03
SPG11-206ENST00000558093 NTNG1Q9Y2I2 539 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 RPH3AQ9Y2J0 694 aaPredicted RBP2.37□□□□□ -2.03
SPG11-206ENST00000558093 FGD5Q6ZNL6 1462 aa2.37□□□□□ -2.03
SPG11-206ENST00000558093 EPOPA6NHQ4 379 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 G3V3Y1 287 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 H0YIV9 168 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 SLC28A1O00337 649 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 EI24O14681 340 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 SPOPO43791 374 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms