RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 CAMK2AQ9UQM7 478 aa7.98□□□□□ -1.13
SNRPA1-206ENST00000558059 MRPS18CQ9Y3D5 142 aaKnown RBP7.98□□□□□ -1.13
SNRPA1-206ENST00000558059 TEP1Q99973 2627 aaKnown RBP7.98□□□□□ -1.13
SNRPA1-206ENST00000558059 MAP1AP78559 2803 aaPredicted RBP7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 CD8B2A6NJW9 211 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 TMEM114B3SHH9 223 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 FAM47E-STBD1D6RA91 191 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 SCAMP2O15127 329 aaKnown RBP7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 TM9SF1O15321 606 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 EMC8O43402 210 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 NKX2-2O95096 273 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 HSPA4LO95757 839 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 ACP2P11117 423 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 CPN1P15169 458 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 MAPK1P28482 360 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 SRD5A2P31213 254 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 TIMP3P35625 211 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 LHX2P50458 406 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 PRKAG1P54619 331 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 GFRA1P56159 465 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 DLX5P56178 289 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 B3GALT5-AS1P59052 145 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 ABCE1P61221 599 aaKnown RBP7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 MLC1Q15049 377 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 ZNHIT3Q15649 155 aaPredicted RBP7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 ATP6AP1LQ52LC2 224 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 IL23RQ5VWK5 629 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 NSUN5P2Q63ZY6 315 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 POMZP3Q6PJE2 187 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 LRIG3Q6UXM1 1119 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 APOOLQ6UXV4 268 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 R3HCC1LQ7Z5L2 792 aaKnown RBP7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 LURAP1LQ8IV03 231 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 LACC1Q8IV20 430 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 RIMKLAQ8IXN7 391 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 DMRTC2Q8IXT2 367 aaPredicted RBP7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 KRTCAP2Q8N6L1 136 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 ZNF781Q8N8C0 355 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 FADS6Q8N9I5 356 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 FNDC5Q8NAU1 212 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 SLC16A11Q8NCK7 471 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 NAXEQ8NCW5 288 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 NUP43Q8NFH3 380 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 TNIP2Q8NFZ5 429 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 OR2M3Q8NG83 312 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 OR14L1PQ8NHC6 308 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 ZFP28Q8NHY6 868 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 PPP1R14CQ8TAE6 165 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 FAM110BQ8TC76 370 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 ZPLD1Q8TCW7 415 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 PIK3R3Q92569 461 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 TUBGCP3Q96CW5 907 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 COQ8BQ96D53 544 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 C14orf79Q96F83 325 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 PGM2Q96G03 612 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 C16orf58Q96GQ5 468 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 SORT1Q99523 831 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 C1orf50Q9BV19 199 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 CENPHQ9H3R5 247 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 DSN1Q9H410 356 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 CALHM2Q9HA72 323 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 Q9N2J8 555 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 EQTNQ9NQ60 294 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 FAM120CQ9NX05 1096 aaKnown RBP7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 TAS2R10Q9NYW0 307 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 ABCG2Q9UNQ0 655 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 ACTL7BQ9Y614 415 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 CELSR1Q9NYQ6 3014 aa7.97□□□□□ -1.13
SNRPA1-206ENST00000558059 HRNRQ86YZ3 2850 aaPredicted RBP7.96□□□□□ -1.13
SNRPA1-206ENST00000558059 HSPB2A8KAH6 182 aa7.96□□□□□ -1.14
SNRPA1-206ENST00000558059 SCO2O43819 266 aa7.96□□□□□ -1.14
SNRPA1-206ENST00000558059 ZWINTO95229 277 aa7.96□□□□□ -1.14
SNRPA1-206ENST00000558059 UTS2O95399 124 aa7.96□□□□□ -1.14
SNRPA1-206ENST00000558059 G6PDP11413 515 aa7.96□□□□□ -1.14
SNRPA1-206ENST00000558059 SNRPBP14678 240 aaKnown RBP7.96□□□□□ -1.14
SNRPA1-206ENST00000558059 BGNP21810 368 aa7.96□□□□□ -1.14
SNRPA1-206ENST00000558059 DPP4P27487 766 aa7.96□□□□□ -1.14
SNRPA1-206ENST00000558059 SSTR2P30874 369 aa7.96□□□□□ -1.14
SNRPA1-206ENST00000558059 HPCAL1P37235 193 aa7.96□□□□□ -1.14
SNRPA1-206ENST00000558059 RPL3P39023 403 aaKnown RBP7.96□□□□□ -1.14
SNRPA1-206ENST00000558059 SLC1A6P48664 564 aa7.96□□□□□ -1.14
SNRPA1-206ENST00000558059 STARP49675 285 aa7.96□□□□□ -1.14
SNRPA1-206ENST00000558059 ZNF136P52737 540 aa7.96□□□□□ -1.14
SNRPA1-206ENST00000558059 DIO3P55073 304 aa7.96□□□□□ -1.14
SNRPA1-206ENST00000558059 DSCR4P56555 118 aaPredicted RBP7.96□□□□□ -1.14
SNRPA1-206ENST00000558059 WDR4P57081 412 aaKnown RBP7.96□□□□□ -1.14
SNRPA1-206ENST00000558059 KRTAP10-9P60411 292 aa7.96□□□□□ -1.14
SNRPA1-206ENST00000558059 EMX2Q04743 252 aa7.96□□□□□ -1.14
SNRPA1-206ENST00000558059 SF3B4Q15427 424 aaKnown RBP eCLIP7.96□□□□□ -1.143e-9■■■■□ 24.3
SNRPA1-206ENST00000558059 HSPB2Q16082 182 aa7.96□□□□□ -1.14
SNRPA1-206ENST00000558059 DUSP5Q16690 384 aa7.96□□□□□ -1.14
SNRPA1-206ENST00000558059 SLC25A35Q3KQZ1 300 aa7.96□□□□□ -1.14
SNRPA1-206ENST00000558059 GRAMD1BQ3KR37 738 aa7.96□□□□□ -1.14
SNRPA1-206ENST00000558059 CPTPQ5TA50 214 aa7.96□□□□□ -1.14
SNRPA1-206ENST00000558059 MFSD12Q6NUT3 480 aa7.96□□□□□ -1.14
SNRPA1-206ENST00000558059 ZCCHC12Q6PEW1 402 aa7.96□□□□□ -1.14
SNRPA1-206ENST00000558059 ZAR1Q86SH2 424 aa7.96□□□□□ -1.14
SNRPA1-206ENST00000558059 ADGRE4PQ86SQ3 457 aa7.96□□□□□ -1.14
SNRPA1-206ENST00000558059 CROCCP2Q86T23 111 aa7.96□□□□□ -1.14
SNRPA1-206ENST00000558059 MARCH3Q86UD3 253 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms