RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 GPC1P35052 558 aa12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 CPOXP36551 454 aa12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 ADAM8P78325 824 aa12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 OCRLQ01968 901 aa12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 FOXD4Q12950 439 aaPredicted RBP12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 FRMD7Q6ZUT3 714 aa12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 OR2M3Q8NG83 312 aa12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 CEP70Q8NHQ1 597 aa12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 ZFP28Q8NHY6 868 aa12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 GFM2Q969S9 779 aaKnown RBP12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 PGM2Q96G03 612 aa12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 FAM111AQ96PZ2 611 aa12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 RHOXF2Q9BQY4 288 aa12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 GLIPR2Q9H4G4 154 aa12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 BEX4Q9NWD9 120 aaPredicted RBP12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 MED11Q9P086 117 aa12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 ZNF175Q9Y473 711 aa12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 POLR3HQ9Y535 204 aaPredicted RBP12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 AP4B1Q9Y6B7 739 aa12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 MED12Q93074 2177 aa12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 KIAA1549Q9HCM3 1950 aa12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 A0A1W2PPM1 405 aa12.29□□□□□ -0.44
SNRPA1-204ENST00000558020 ARHGEF9O43307 516 aa12.29□□□□□ -0.44
SNRPA1-204ENST00000558020 EMC8O43402 210 aa12.29□□□□□ -0.44
SNRPA1-204ENST00000558020 CHEK2O96017 543 aa12.29□□□□□ -0.44
SNRPA1-204ENST00000558020 PROCP04070 461 aa12.29□□□□□ -0.44
SNRPA1-204ENST00000558020 FAM153BP0C7A2 387 aa12.29□□□□□ -0.44
SNRPA1-204ENST00000558020 PRPS2P11908 318 aa12.29□□□□□ -0.44
SNRPA1-204ENST00000558020 FCGR2AP12318 317 aa12.29□□□□□ -0.44
SNRPA1-204ENST00000558020 CRHR1P34998 444 aa12.29□□□□□ -0.44
SNRPA1-204ENST00000558020 CD79BP40259 229 aa12.29□□□□□ -0.44
SNRPA1-204ENST00000558020 RFX3P48380 749 aa12.29□□□□□ -0.44
SNRPA1-204ENST00000558020 KCNJ5P48544 419 aa12.29□□□□□ -0.44
SNRPA1-204ENST00000558020 FOXA1P55317 472 aa12.29□□□□□ -0.44
SNRPA1-204ENST00000558020 B3GALT5-AS1P59052 145 aa12.29□□□□□ -0.44
SNRPA1-204ENST00000558020 STX5Q13190 355 aa12.29□□□□□ -0.44
SNRPA1-204ENST00000558020 SGCBQ16585 318 aa12.29□□□□□ -0.44
SNRPA1-204ENST00000558020 FAM153CQ494X1 144 aa12.29□□□□□ -0.44
SNRPA1-204ENST00000558020 EIF1ADQ8N9N8 165 aaKnown RBP12.29□□□□□ -0.44
SNRPA1-204ENST00000558020 GPR151Q8TDV0 419 aa12.29□□□□□ -0.44
SNRPA1-204ENST00000558020 STARD4Q96DR4 205 aa12.29□□□□□ -0.44
SNRPA1-204ENST00000558020 C1GALT1C1Q96EU7 318 aa12.29□□□□□ -0.44
SNRPA1-204ENST00000558020 LMF2Q9BU23 707 aaKnown RBP12.29□□□□□ -0.44
SNRPA1-204ENST00000558020 MED18Q9BUE0 208 aa12.29□□□□□ -0.44
SNRPA1-204ENST00000558020 OXSMQ9NWU1 459 aa12.29□□□□□ -0.44
SNRPA1-204ENST00000558020 C1orf109Q9NX04 203 aa12.29□□□□□ -0.44
SNRPA1-204ENST00000558020 MID2Q9UJV3 735 aa12.29□□□□□ -0.44
SNRPA1-204ENST00000558020 EMCNQ9ULC0 261 aa12.29□□□□□ -0.44
SNRPA1-204ENST00000558020 ZNF337Q9Y3M9 751 aa12.29□□□□□ -0.44
SNRPA1-204ENST00000558020 MED12LQ86YW9 2145 aa12.28□□□□□ -0.44
SNRPA1-204ENST00000558020 UQCRHLA0A096LP55 91 aa12.28□□□□□ -0.44
SNRPA1-204ENST00000558020 OR2M5A3KFT3 312 aa12.28□□□□□ -0.44
SNRPA1-204ENST00000558020 C16orf97H3BN30 126 aa12.28□□□□□ -0.44
SNRPA1-204ENST00000558020 COPEO14579 308 aa12.28□□□□□ -0.44
SNRPA1-204ENST00000558020 PLIN3O60664 434 aa12.28□□□□□ -0.44
SNRPA1-204ENST00000558020 UTS2O95399 124 aa12.28□□□□□ -0.44
SNRPA1-204ENST00000558020 PSMG1O95456 288 aa12.28□□□□□ -0.44
SNRPA1-204ENST00000558020 MANFP55145 182 aaKnown RBP12.28□□□□□ -0.44
SNRPA1-204ENST00000558020 PRR5P85299 388 aa12.28□□□□□ -0.44
SNRPA1-204ENST00000558020 FAM27E3Q08E93 113 aa12.28□□□□□ -0.44
SNRPA1-204ENST00000558020 POU4F3Q15319 338 aa12.28□□□□□ -0.44
SNRPA1-204ENST00000558020 FAM219BQ5XKK7 198 aa12.28□□□□□ -0.44
SNRPA1-204ENST00000558020 PLXDC2Q6UX71 529 aa12.28□□□□□ -0.44
SNRPA1-204ENST00000558020 MARCH3Q86UD3 253 aa12.28□□□□□ -0.44
SNRPA1-204ENST00000558020 CDRT4Q8N9R6 151 aa12.28□□□□□ -0.44
SNRPA1-204ENST00000558020 MZB1Q8WU39 189 aa12.28□□□□□ -0.44
SNRPA1-204ENST00000558020 PIGTQ969N2 578 aa12.28□□□□□ -0.44
SNRPA1-204ENST00000558020 ZBED6CLQ96FA7 236 aaPredicted RBP12.28□□□□□ -0.44
SNRPA1-204ENST00000558020 ZNF845Q96IR2 970 aaPredicted RBP12.28□□□□□ -0.44
SNRPA1-204ENST00000558020 TRMOQ9BU70 441 aa12.28□□□□□ -0.44
SNRPA1-204ENST00000558020 PINK1Q9BXM7 581 aa12.28□□□□□ -0.44
SNRPA1-204ENST00000558020 TXLNGYQ9BZA5 131 aa12.28□□□□□ -0.44
SNRPA1-204ENST00000558020 PRRG4Q9BZD6 226 aa12.28□□□□□ -0.44
SNRPA1-204ENST00000558020 LRTM1Q9HBL6 345 aa12.28□□□□□ -0.44
SNRPA1-204ENST00000558020 FANCFQ9NPI8 374 aa12.28□□□□□ -0.44
SNRPA1-204ENST00000558020 PAQR5Q9NXK6 330 aaPredicted RBP12.28□□□□□ -0.44
SNRPA1-204ENST00000558020 A0A087WZY1 265 aa12.27□□□□□ -0.45
SNRPA1-204ENST00000558020 H3BML4 177 aa12.27□□□□□ -0.45
SNRPA1-204ENST00000558020 PDPK1O15530 556 aa12.27□□□□□ -0.45
SNRPA1-204ENST00000558020 SEC14L5O43304 696 aa12.27□□□□□ -0.45
SNRPA1-204ENST00000558020 ANGPTL1O95841 491 aa12.27□□□□□ -0.45
SNRPA1-204ENST00000558020 CD8BP10966 210 aa12.27□□□□□ -0.45
SNRPA1-204ENST00000558020 NEFHP12036 1026 aa12.27□□□□□ -0.45
SNRPA1-204ENST00000558020 POU2F1P14859 743 aa12.27□□□□□ -0.45
SNRPA1-204ENST00000558020 HPGDP15428 266 aa12.27□□□□□ -0.45
SNRPA1-204ENST00000558020 PRPH2P23942 346 aa12.27□□□□□ -0.45
SNRPA1-204ENST00000558020 KIR2DL2P43627 348 aaPredicted RBP12.27□□□□□ -0.45
SNRPA1-204ENST00000558020 PRKAG1P54619 331 aa12.27□□□□□ -0.45
SNRPA1-204ENST00000558020 NKX6-1P78426 367 aaPredicted RBP12.27□□□□□ -0.45
SNRPA1-204ENST00000558020 HSPB3Q12988 150 aa12.27□□□□□ -0.45
SNRPA1-204ENST00000558020 PRSS53Q2L4Q9 553 aa12.27□□□□□ -0.45
SNRPA1-204ENST00000558020 LIPMQ5VYY2 423 aa12.27□□□□□ -0.45
SNRPA1-204ENST00000558020 SHEQ5VZ18 495 aa12.27□□□□□ -0.45
SNRPA1-204ENST00000558020 BTLAQ7Z6A9 289 aa12.27□□□□□ -0.45
SNRPA1-204ENST00000558020 BIVMQ86UB2 503 aa12.27□□□□□ -0.45
SNRPA1-204ENST00000558020 TDRPQ86YL5 185 aa12.27□□□□□ -0.45
SNRPA1-204ENST00000558020 UBLCP1Q8WVY7 318 aaPredicted RBP12.27□□□□□ -0.45
SNRPA1-204ENST00000558020 PPCDCQ96CD2 204 aa12.27□□□□□ -0.45
SNRPA1-204ENST00000558020 ZNF764Q96H86 408 aaPredicted RBP12.27□□□□□ -0.45
SNRPA1-204ENST00000558020 POM121Q96HA1 1249 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms