RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 ARPINQ7Z6K5 226 aa19.52■□□□□ 0.72
CASC4-204ENST00000557945 FBXW8Q8N3Y1 598 aa19.52■□□□□ 0.72
CASC4-204ENST00000557945 OR10A6Q8NH74 314 aa19.52■□□□□ 0.72
CASC4-204ENST00000557945 MAL2Q969L2 176 aa19.52■□□□□ 0.72
CASC4-204ENST00000557945 SCMH1Q96GD3 660 aa19.52■□□□□ 0.72
CASC4-204ENST00000557945 SECISBP2Q96T21 854 aaKnown RBP19.52■□□□□ 0.72
CASC4-204ENST00000557945 HOPXQ9BPY8 73 aaPredicted RBP19.52■□□□□ 0.72
CASC4-204ENST00000557945 ECSITQ9BQ95 431 aa19.52■□□□□ 0.72
CASC4-204ENST00000557945 KAT8Q9H7Z6 458 aaKnown RBP19.52■□□□□ 0.72
CASC4-204ENST00000557945 KLRF1Q9NZS2 232 aa19.52■□□□□ 0.72
CASC4-204ENST00000557945 FLRT3Q9NZU0 649 aa19.52■□□□□ 0.72
CASC4-204ENST00000557945 CNOT11Q9UKZ1 510 aaKnown RBP19.52■□□□□ 0.72
CASC4-204ENST00000557945 PRAMEF25A6NGN4 478 aa19.51■□□□□ 0.71
CASC4-204ENST00000557945 H6PDO95479 791 aa19.51■□□□□ 0.71
CASC4-204ENST00000557945 BCHEP06276 602 aa19.51■□□□□ 0.71
CASC4-204ENST00000557945 BMP2P12643 396 aa19.51■□□□□ 0.71
CASC4-204ENST00000557945 SLC6A2P23975 617 aa19.51■□□□□ 0.71
CASC4-204ENST00000557945 KLRB1Q12918 225 aa19.51■□□□□ 0.71
CASC4-204ENST00000557945 GPR68Q15743 365 aa19.51■□□□□ 0.71
CASC4-204ENST00000557945 GRAMD1BQ3KR37 738 aa19.51■□□□□ 0.71
CASC4-204ENST00000557945 BICRALQ6AI39 1079 aa19.51■□□□□ 0.71
CASC4-204ENST00000557945 PNPLA2Q96AD5 504 aa19.51■□□□□ 0.71
CASC4-204ENST00000557945 TRNT1Q96Q11 434 aaKnown RBP19.51■□□□□ 0.71
CASC4-204ENST00000557945 GPATCH1Q9BRR8 931 aaKnown RBP19.51■□□□□ 0.71
CASC4-204ENST00000557945 PIF1Q9H611 641 aa19.51■□□□□ 0.71
CASC4-204ENST00000557945 A4GALTQ9NPC4 353 aa19.51■□□□□ 0.71
CASC4-204ENST00000557945 MKLN1Q9UL63 735 aa19.51■□□□□ 0.71
CASC4-204ENST00000557945 L3MBTL1Q9Y468 752 aa19.51■□□□□ 0.71
CASC4-204ENST00000557945 WDR45Q9Y484 360 aa19.51■□□□□ 0.71
CASC4-204ENST00000557945 ATMQ13315 3056 aa19.51■□□□□ 0.71
CASC4-204ENST00000557945 NPIPA5A0A0B4J1W7 369 aa19.5■□□□□ 0.71
CASC4-204ENST00000557945 B2RBV5 119 aa19.5■□□□□ 0.71
CASC4-204ENST00000557945 NPIPA7E9PJI5 369 aa19.5■□□□□ 0.71
CASC4-204ENST00000557945 PEX1O43933 1283 aa19.5■□□□□ 0.71
CASC4-204ENST00000557945 FCMRO60667 390 aa19.5■□□□□ 0.71
CASC4-204ENST00000557945 UBOX5O94941 541 aa19.5■□□□□ 0.71
CASC4-204ENST00000557945 TFPTP0C1Z6 253 aa19.5■□□□□ 0.71
CASC4-204ENST00000557945 NPIPA8P0DM63 369 aa19.5■□□□□ 0.71
CASC4-204ENST00000557945 HPGDP15428 266 aa19.5■□□□□ 0.71
CASC4-204ENST00000557945 CNR1P21554 472 aa19.5■□□□□ 0.71
CASC4-204ENST00000557945 CALB2P22676 271 aa19.5■□□□□ 0.71
CASC4-204ENST00000557945 LCN1P31025 176 aa19.5■□□□□ 0.71
CASC4-204ENST00000557945 EVI2BP34910 448 aa19.5■□□□□ 0.71
CASC4-204ENST00000557945 CASP3P42574 277 aa19.5■□□□□ 0.71
CASC4-204ENST00000557945 PSME3P61289 254 aa19.5■□□□□ 0.71
CASC4-204ENST00000557945 KCNJ2P63252 427 aa19.5■□□□□ 0.71
CASC4-204ENST00000557945 GNA13Q14344 377 aa19.5■□□□□ 0.71
CASC4-204ENST00000557945 SULF2Q8IWU5 870 aa19.5■□□□□ 0.71
CASC4-204ENST00000557945 OR4C3Q8NH37 302 aa19.5■□□□□ 0.71
CASC4-204ENST00000557945 SLC38A5Q8WUX1 472 aa19.5■□□□□ 0.71
CASC4-204ENST00000557945 TMEM19Q96HH6 336 aa19.5■□□□□ 0.71
CASC4-204ENST00000557945 DOHHQ9BU89 302 aa19.5■□□□□ 0.71
CASC4-204ENST00000557945 ZNF350Q9GZX5 532 aa19.5■□□□□ 0.71
CASC4-204ENST00000557945 PCDHGB6Q9Y5F9 930 aa19.5■□□□□ 0.71
CASC4-204ENST00000557945 ATRXP46100 2492 aa19.5■□□□□ 0.71
CASC4-204ENST00000557945 A0A0G2JMM0 328 aa19.49■□□□□ 0.71
CASC4-204ENST00000557945 A0A1W2PPB8 328 aa19.49■□□□□ 0.71
CASC4-204ENST00000557945 A0A1W2PRS3 328 aa19.49■□□□□ 0.71
CASC4-204ENST00000557945 KIR3DP1A8MWS1 328 aa19.49■□□□□ 0.71
CASC4-204ENST00000557945 C5orf58C9J3I9 102 aa19.49■□□□□ 0.71
CASC4-204ENST00000557945 KLRC4-KLRK1H3BQV0 150 aa19.49■□□□□ 0.71
CASC4-204ENST00000557945 CHRM4P08173 479 aa19.49■□□□□ 0.71
CASC4-204ENST00000557945 T-ENOLP0DO92 83 aa19.49■□□□□ 0.71
CASC4-204ENST00000557945 DNASE1L1P49184 302 aa19.49■□□□□ 0.71
CASC4-204ENST00000557945 CLK3P49761 638 aaKnown RBP19.49■□□□□ 0.71
CASC4-204ENST00000557945 SLC7A2P52569 658 aa19.49■□□□□ 0.71
CASC4-204ENST00000557945 SLC25A3Q00325 362 aa19.49■□□□□ 0.71
CASC4-204ENST00000557945 CHRNEQ04844 493 aa19.49■□□□□ 0.71
CASC4-204ENST00000557945 NFATC3Q12968 1075 aa19.49■□□□□ 0.71
CASC4-204ENST00000557945 TBCELQ5QJ74 424 aa19.49■□□□□ 0.71
CASC4-204ENST00000557945 LSM14AQ8ND56 463 aaKnown RBP19.49■□□□□ 0.71
CASC4-204ENST00000557945 FBXO27Q8NI29 283 aa19.49■□□□□ 0.71
CASC4-204ENST00000557945 NFKBIDQ8NI38 313 aa19.49■□□□□ 0.71
CASC4-204ENST00000557945 GRHL3Q8TE85 626 aa19.49■□□□□ 0.71
CASC4-204ENST00000557945 OSBPL11Q9BXB4 747 aa19.49■□□□□ 0.71
CASC4-204ENST00000557945 TBL1XR1Q9BZK7 514 aa19.49■□□□□ 0.71
CASC4-204ENST00000557945 HOXD1Q9GZZ0 328 aa19.49■□□□□ 0.71
CASC4-204ENST00000557945 GALNT9Q9HCQ5 603 aa19.49■□□□□ 0.71
CASC4-204ENST00000557945 POLE3Q9NRF9 147 aa19.49■□□□□ 0.71
CASC4-204ENST00000557945 UBQLN4Q9NRR5 601 aa19.49■□□□□ 0.71
CASC4-204ENST00000557945 DEPPQ9NTK1 212 aa19.49■□□□□ 0.71
CASC4-204ENST00000557945 CMTM6Q9NX76 183 aa19.49■□□□□ 0.71
CASC4-204ENST00000557945 CALML5Q9NZT1 146 aa19.49■□□□□ 0.71
CASC4-204ENST00000557945 EXPH5Q8NEV8 1989 aa19.49■□□□□ 0.71
CASC4-204ENST00000557945 TLN1Q9Y490 2541 aaKnown RBP19.48■□□□□ 0.71
CASC4-204ENST00000557945 SCDO00767 359 aa19.48■□□□□ 0.71
CASC4-204ENST00000557945 SCO2O43819 266 aa19.48■□□□□ 0.71
CASC4-204ENST00000557945 ZIC2O95409 532 aaPredicted RBP19.48■□□□□ 0.71
CASC4-204ENST00000557945 OXSR1O95747 527 aaPredicted RBP19.48■□□□□ 0.71
CASC4-204ENST00000557945 ARAFP10398 606 aa19.48■□□□□ 0.71
CASC4-204ENST00000557945 DCTP40126 519 aa19.48■□□□□ 0.71
CASC4-204ENST00000557945 MEOX1P50221 254 aa19.48■□□□□ 0.71
CASC4-204ENST00000557945 CRISP3P54108 245 aa19.48■□□□□ 0.71
CASC4-204ENST00000557945 ATP12AP54707 1039 aa19.48■□□□□ 0.71
CASC4-204ENST00000557945 CDK6Q00534 326 aa19.48■□□□□ 0.71
CASC4-204ENST00000557945 TYW3Q6IPR3 259 aaKnown RBP19.48■□□□□ 0.71
CASC4-204ENST00000557945 C8orf82Q6P1X6 216 aaPredicted RBP19.48■□□□□ 0.71
CASC4-204ENST00000557945 FRRS1Q6ZNA5 592 aa19.48■□□□□ 0.71
CASC4-204ENST00000557945 LRRC74BQ6ZQY2 392 aa19.48■□□□□ 0.71
CASC4-204ENST00000557945 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms