RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 ERGP11308 486 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 HSD17B2P37059 387 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 ARHGEF6Q15052 776 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 PIP5KL1Q5T9C9 394 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 KIAA0907Q7Z7F0 614 aaPredicted RBP11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 C11orf96Q7Z7L8 435 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 NR2C2APQ86WQ0 139 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 ZNF366Q8N895 744 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 AMER3Q8N944 861 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 ZNF680Q8NEM1 530 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 ACOT11Q8WXI4 607 aaPredicted RBP11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 GHITMQ9H3K2 345 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 ZFP64Q9NPA5 681 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 BABAM2Q9NXR7 383 aa11.07□□□□□ -0.64
VIPAS39-211ENST00000557658 HEATR5BQ9P2D3 2071 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 TRAV6A0A075B6T7 132 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 A0A0A6YYD5 115 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 ERAL1O75616 437 aaKnown RBP11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 NFATC1O95644 943 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 SERPIND1P05546 499 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 TPOP07202 933 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 NPR2P20594 1047 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 PAICSP22234 425 aaKnown RBP11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 F8A1P23610 371 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 HOXD10P28358 340 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 GPR4P46093 362 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 DECR1Q16698 335 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 ARHGAP15Q53QZ3 475 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 CD276Q5ZPR3 534 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 KRT74Q7RTS7 529 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 OR8H3Q8N146 312 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 ACBD7Q8N6N7 88 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 SIRT6Q8N6T7 355 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 ZNF655Q8N720 491 aaPredicted RBP11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 OR2T33Q8NG76 320 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 OR56A1Q8NGH5 318 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 OR51G2Q8NGK0 314 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 OR2M2Q96R28 347 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 ISG20L2Q9H9L3 353 aaKnown RBP11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 NUDT15Q9NV35 164 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 KLHL28Q9NXS3 571 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 NUBP2Q9Y5Y2 271 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 CSNK1G3Q9Y6M4 447 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 SOCS6O14544 535 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 VEGFDO43915 354 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 NTN1O95631 604 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 RAF1P04049 648 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 RPN2P04844 631 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 C8AP07357 584 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 TFPIP10646 304 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 PSMB5P28074 263 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 PTGER1P34995 402 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 BTCP35070 178 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 SHC2P98077 582 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 RPA4Q13156 261 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 SDE2Q6IQ49 451 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 PYHIN1Q6K0P9 492 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 IL20RBQ6UXL0 311 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 ZNF620Q6ZNG0 422 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 PLEKHM3Q6ZWE6 761 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 CXXC5Q7LFL8 322 aaKnown RBP11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 VRK2Q86Y07 508 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 CPOQ8IVL8 374 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 GID4Q8IVV7 300 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 GPR135Q8IZ08 494 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 OR11H7Q8NGC8 314 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 LRRC20Q8TCA0 184 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 KLK6Q92876 244 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 MOAP1Q96BY2 351 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 NRTNQ99748 197 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 C17orf62Q9BQA9 187 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 OR51J1Q9H342 316 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 NARFLQ9H6Q4 476 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 HINT3Q9NQE9 182 aaKnown RBP11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 NUP50Q9UKX7 468 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 RASD1Q9Y272 281 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 GPR55Q9Y2T6 319 aaPredicted RBP11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 PRKAB1Q9Y478 270 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 AUP1Q9Y679 476 aa11.06□□□□□ -0.64
VIPAS39-211ENST00000557658 COL4A3Q01955 1670 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 GLOD5A6NK44 160 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 MAN2B1O00754 1011 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 SPINT1O43278 529 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 SLC2A10O95528 541 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 PDGFAP04085 211 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 ALPPL2P10696 532 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 WEE1P30291 646 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 RGS1Q08116 209 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 FZD5Q13467 585 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 COL28A1Q2UY09 1125 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 WASH2PQ6VEQ5 465 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 AMZ2Q86W34 360 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 NKAIN4Q8IVV8 208 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 NRMQ8IXM6 262 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 DTX3Q8N9I9 347 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 OR5K2Q8NHB8 316 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 OMA1Q96E52 524 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 C16orf58Q96GQ5 468 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 ART5Q96L15 291 aa11.05□□□□□ -0.64
VIPAS39-211ENST00000557658 ALG8Q9BVK2 526 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms