RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 ZNF556Q9HAH1 456 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 IL1RL2Q9HB29 575 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 ADGRL4Q9HBW9 690 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 B3GAT2Q9NPZ5 323 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 GLRX2Q9NS18 164 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 UFSP2Q9NUQ7 469 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 PIPOXQ9P0Z9 390 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 ONECUT1Q9UBC0 465 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 SEC14L4Q9UDX3 406 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 ANAPC7Q9UJX3 599 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 CDH9Q9ULB4 789 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 CHTOPQ9Y3Y2 248 aaKnown RBP2.65□□□□□ -1.99
TRAV28-201ENST00000557548 PYGO1Q9Y3Y4 419 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 TRAV26-1A0A087WT03 109 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.64□□□□□ -1.99
TRAV28-201ENST00000557548 TRBV5-4A0A0C4DH59 114 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 E9PBE3 544 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 BMPR1BO00238 502 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 BTN3A3O00478 584 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 CETN3O15182 167 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 INSIG1O15503 277 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 POLR2DO15514 142 aaKnown RBP2.64□□□□□ -1.99
TRAV28-201ENST00000557548 ZNF264O43296 627 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 LCMT2O60294 686 aaKnown RBP2.64□□□□□ -1.99
TRAV28-201ENST00000557548 NMT2O60551 498 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 FCMRO60667 390 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 TPST2O60704 377 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 STX11O75558 287 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 RHBDL1O75783 438 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 PDE5AO76074 875 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 B3GAT3O94766 335 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 OPN1LWP04000 364 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 IGF1P05019 195 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 CAPN1P07384 714 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 CCDC172P0C7W6 258 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 PATE4P0C8F1 98 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 DBTP11182 482 aaKnown RBP2.64□□□□□ -1.99
TRAV28-201ENST00000557548 FOSL2P15408 326 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 NCK1P16333 377 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 GNB3P16520 340 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 XRCC1P18887 633 aaPredicted RBP2.64□□□□□ -1.99
TRAV28-201ENST00000557548 PRKACGP22612 351 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 CCR1P32246 355 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 HPCAL1P37235 193 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 SLC7A2P52569 658 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 SUCLG1P53597 346 aaKnown RBP2.64□□□□□ -1.99
TRAV28-201ENST00000557548 ATP5IP56385 69 aaPredicted RBP2.64□□□□□ -1.99
TRAV28-201ENST00000557548 IL9RQ01113 521 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 ZNF85Q03923 595 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 NCBP1Q09161 790 aaKnown RBP2.64□□□□□ -1.99
TRAV28-201ENST00000557548 TRDNQ13061 729 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 ZNF177Q13360 481 aaPredicted RBP2.64□□□□□ -1.99
TRAV28-201ENST00000557548 ATXN7L3Q14CW9 347 aaPredicted RBP2.64□□□□□ -1.99
TRAV28-201ENST00000557548 UPP1Q16831 310 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 HLA-BQ31612 363 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 KRT71Q3SY84 523 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 TMEM52BQ4KMG9 183 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 AP1ARQ63HQ0 302 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 PRR5LQ6MZQ0 368 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 SCYL2Q6P3W7 929 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 LCLAT1Q6UWP7 414 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 KIF6Q6ZMV9 814 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 FRRS1Q6ZNA5 592 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 FAM228AQ86W67 206 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 MYOCDQ8IZQ8 938 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 LRRC75A-AS1Q8N1F1 130 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 UBE2J2Q8N2K1 259 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 BBS5Q8N3I7 341 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 PDCL2Q8N4E4 241 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 ARL14Q8N4G2 192 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 NECAB1Q8N987 351 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 BBOF1Q8ND07 529 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 ZNRF1Q8ND25 227 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 OR10G7Q8NGN6 311 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 OR8K3Q8NH51 312 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 C11orf45Q8TAV5 145 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 ZNF519Q8TB69 540 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 CNIH3Q8TBE1 160 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 M1APQ8TC57 530 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 SCARB1Q8WTV0 552 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 MYLPFQ96A32 169 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 NRBF2Q96F24 287 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 PELI1Q96FA3 418 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 COQ2Q96H96 371 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 SH3YL1Q96HL8 342 aaPredicted RBP2.64□□□□□ -1.99
TRAV28-201ENST00000557548 AMDHD1Q96NU7 426 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 TGM7Q96PF1 710 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 TMEM121Q9BTD3 319 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 ROPN1BQ9BZX4 212 aaPredicted RBP2.64□□□□□ -1.99
TRAV28-201ENST00000557548 COMMD4Q9H0A8 199 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 ESM1Q9NQ30 184 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 ETNK2Q9NVF9 386 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 SMOXQ9NWM0 555 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 BARHL2Q9NY43 387 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 SEC14L3Q9UDX4 400 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 PSME2Q9UL46 239 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 RPH3ALQ9UNE2 315 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 DHRS7Q9Y394 339 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 EXOSC1Q9Y3B2 195 aaKnown RBP2.64□□□□□ -1.99
TRAV28-201ENST00000557548 PRDM2Q13029 1718 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms