RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 WFDC6Q9BQY6 131 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 ITPAQ9BY32 194 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 GABARAPL3Q9BY60 117 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 GRIP2Q9C0E4 1043 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 OR8D2Q9GZM6 311 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 ING2Q9H160 280 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 ANKRD19PQ9H560 264 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 FBXO8Q9NRD0 319 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 RXFP3Q9NSD7 469 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 CBLCQ9ULV8 474 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 MGAT4BQ9UQ53 548 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 GPR55Q9Y2T6 319 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-233ENST00000557529 OR10H1Q9Y4A9 318 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 CHST2Q9Y4C5 530 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 PCDHGA10Q9Y5H3 936 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 HSPE1-MOB4S4R3N1 261 aa11.57□□□□□ -0.56
SHMT2-233ENST00000557529 COL5A1P20908 1838 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-233ENST00000557529 NUP210LQ5VU65 1888 aa11.56□□□□□ -0.56
SHMT2-233ENST00000557529 TRBV4-1A0A0J9YWV2 114 aa11.56□□□□□ -0.56
SHMT2-233ENST00000557529 A8MUA0 341 aa11.56□□□□□ -0.56
SHMT2-233ENST00000557529 TMX2-CTNND1H3BSU7 103 aa11.56□□□□□ -0.56
SHMT2-233ENST00000557529 OR5F1O95221 314 aa11.56□□□□□ -0.56
SHMT2-233ENST00000557529 DDAH2O95865 285 aa11.56□□□□□ -0.56
SHMT2-233ENST00000557529 ADAP00813 363 aa11.56□□□□□ -0.56
SHMT2-233ENST00000557529 CT45A8P0DMV1 189 aa11.56□□□□□ -0.56
SHMT2-233ENST00000557529 CT45A9P0DMV2 189 aa11.56□□□□□ -0.56
SHMT2-233ENST00000557529 CCKBRP32239 447 aa11.56□□□□□ -0.56
SHMT2-233ENST00000557529 RYKP34925 604 aa11.56□□□□□ -0.56
SHMT2-233ENST00000557529 PPICP45877 212 aa11.56□□□□□ -0.56
SHMT2-233ENST00000557529 GTF2A1P52655 376 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-233ENST00000557529 NPRL3Q12980 569 aa11.56□□□□□ -0.56
SHMT2-233ENST00000557529 PIN1Q13526 163 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-233ENST00000557529 TRAM2Q15035 370 aa11.56□□□□□ -0.56
SHMT2-233ENST00000557529 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.56□□□□□ -0.56
SHMT2-233ENST00000557529 CT45A2Q5DJT8 189 aa11.56□□□□□ -0.56
SHMT2-233ENST00000557529 ZNF691Q5VV52 312 aa11.56□□□□□ -0.56
SHMT2-233ENST00000557529 ZNF385CQ66K41 422 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-233ENST00000557529 ZNF770Q6IQ21 691 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-233ENST00000557529 RBM44Q6ZP01 1051 aaKnown RBP11.56□□□□□ -0.56
SHMT2-233ENST00000557529 RANBP3LQ86VV4 465 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-233ENST00000557529 APLFQ8IW19 511 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-233ENST00000557529 NAXDQ8IW45 347 aa11.56□□□□□ -0.56
SHMT2-233ENST00000557529 PRSS58Q8IYP2 241 aa11.56□□□□□ -0.56
SHMT2-233ENST00000557529 PARP8Q8N3A8 854 aa11.56□□□□□ -0.56
SHMT2-233ENST00000557529 AQP11Q8NBQ7 271 aa11.56□□□□□ -0.56
SHMT2-233ENST00000557529 TOR1AIP2Q8NFQ8 470 aa11.56□□□□□ -0.56
SHMT2-233ENST00000557529 SLC2A12Q8TD20 617 aa11.56□□□□□ -0.56
SHMT2-233ENST00000557529 ZNF721Q8TF20 911 aa11.56□□□□□ -0.56
SHMT2-233ENST00000557529 PITX2Q99697 317 aa11.56□□□□□ -0.56
SHMT2-233ENST00000557529 APOL4Q9BPW4 351 aa11.56□□□□□ -0.56
SHMT2-233ENST00000557529 FUZQ9BT04 418 aa11.56□□□□□ -0.56
SHMT2-233ENST00000557529 MRPS26Q9BYN8 205 aaKnown RBP11.56□□□□□ -0.56
SHMT2-233ENST00000557529 SLC26A1Q9H2B4 701 aa11.56□□□□□ -0.56
SHMT2-233ENST00000557529 FBXO34Q9NWN3 711 aa11.56□□□□□ -0.56
SHMT2-233ENST00000557529 COPS7AQ9UBW8 275 aa11.56□□□□□ -0.56
SHMT2-233ENST00000557529 MRTO4Q9UKD2 239 aaKnown RBP11.56□□□□□ -0.56
SHMT2-233ENST00000557529 DTX4Q9Y2E6 619 aa11.56□□□□□ -0.56
SHMT2-233ENST00000557529 GMPPBQ9Y5P6 360 aa11.56□□□□□ -0.56
SHMT2-233ENST00000557529 CCDC88CQ9P219 2028 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 SH3PXD2BA1X283 911 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 CDHR4A6H8M9 788 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 FRG2CA6NGY1 282 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 VSTM2BA6NLU5 285 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 OR6C76A6NM76 312 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 PRR33A8MZF0 331 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 B4E171 279 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 AGRPO00253 132 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 PEX12O00623 359 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 CDX4O14627 284 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-233ENST00000557529 FMO6PO60774 539 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 CYP7B1O75881 506 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 SEC24DO94855 1032 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-233ENST00000557529 HEXBP07686 556 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 CD59P13987 128 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 DRD5P21918 477 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 LCN1P31025 176 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 IFNGR2P38484 337 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 TSPAN7P41732 249 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 RFX3P48380 749 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 UGT2B15P54855 530 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 PSPHP78330 225 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 E2F1Q01094 437 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 ST3GAL3Q11203 375 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 ILKQ13418 452 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 SF3A2Q15428 464 aaKnown RBP11.55□□□□□ -0.56
SHMT2-233ENST00000557529 ZNF141Q15928 474 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 MAPK14Q16539 360 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 DECR1Q16698 335 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 MRPL2Q5T653 305 aaKnown RBP11.55□□□□□ -0.56
SHMT2-233ENST00000557529 PLEKHM3Q6ZWE6 761 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 CMIPQ8IY22 773 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 BCORP1Q8N888 145 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 OR4N2Q8NGD1 307 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 OR9Q2Q8NGE9 314 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 METTL21AQ8WXB1 218 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 SLC38A4Q969I6 547 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 SLC35B4Q969S0 331 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 LRFN5Q96NI6 719 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 MCHR1Q99705 422 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 CDC6Q99741 560 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms