RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 OR4F15Q8NGB8 312 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 SCMH1Q96GD3 660 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 OR2M2Q96R28 347 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 THAP7Q9BT49 309 aaPredicted RBP15.25■□□□□ 0.03
SHMT2-232ENST00000557487 CUEDC1Q9NWM3 386 aaPredicted RBP15.25■□□□□ 0.03
SHMT2-232ENST00000557487 TMA7Q9Y2S6 64 aaKnown RBP15.25■□□□□ 0.03
SHMT2-232ENST00000557487 NUBP2Q9Y5Y2 271 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 NINQ8N4C6 2090 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 SHISA3A0PJX4 238 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 J3QRE1 110 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 SOX1O00570 391 aaPredicted RBP15.25■□□□□ 0.03
SHMT2-232ENST00000557487 SPINT1O43278 529 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 CHP2O43745 196 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 OR5F1O95221 314 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 EVI2BP34910 448 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 CD79BP40259 229 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 RAG2P55895 527 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 VASNQ6EMK4 673 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 ANKRD54Q6NXT1 300 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 SMARCD3Q6STE5 483 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 ZNF620Q6ZNG0 422 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 IDO2Q6ZQW0 420 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 MBOAT2Q6ZWT7 520 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 SHFQ7M4L6 423 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 HDDC2Q7Z4H3 204 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 ACBD7Q8N6N7 88 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 OR4Q3Q8NH05 313 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 FAM46AQ96IP4 442 aaKnown RBP15.25■□□□□ 0.03
SHMT2-232ENST00000557487 GFM1Q96RP9 751 aaKnown RBP15.25■□□□□ 0.03
SHMT2-232ENST00000557487 C7orf50Q9BRJ6 194 aaKnown RBP15.25■□□□□ 0.03
SHMT2-232ENST00000557487 OSGEPL1Q9H4B0 414 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 ZNF275Q9NSD4 429 aaPredicted RBP15.25■□□□□ 0.03
SHMT2-232ENST00000557487 BABAM2Q9NXR7 383 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 ELF5Q9UKW6 265 aaPredicted RBP15.25■□□□□ 0.03
SHMT2-232ENST00000557487 PLAGL1Q9UM63 463 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 AUP1Q9Y679 476 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 CACNG2Q9Y698 323 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 STON1Q9Y6Q2 735 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 KIAA1549LQ6ZVL6 1849 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 CD8B2A6NJW9 211 aa15.24■□□□□ 0.03
SHMT2-232ENST00000557487 NRG2O14511 850 aaPredicted RBP15.24■□□□□ 0.03
SHMT2-232ENST00000557487 LRRTM2O43300 516 aa15.24■□□□□ 0.03
SHMT2-232ENST00000557487 EMC8O43402 210 aa15.24■□□□□ 0.03
SHMT2-232ENST00000557487 OR1F1O43749 312 aa15.24■□□□□ 0.03
SHMT2-232ENST00000557487 LZTS3O60299 673 aaPredicted RBP15.24■□□□□ 0.03
SHMT2-232ENST00000557487 PLOD3O60568 738 aa15.24■□□□□ 0.03
SHMT2-232ENST00000557487 NCR1O76036 304 aa15.24■□□□□ 0.03
SHMT2-232ENST00000557487 HMGN2P05204 90 aaKnown RBP15.24■□□□□ 0.03
SHMT2-232ENST00000557487 CD8BP10966 210 aa15.24■□□□□ 0.03
SHMT2-232ENST00000557487 C6P13671 934 aa15.24■□□□□ 0.03
SHMT2-232ENST00000557487 GNSP15586 552 aa15.24■□□□□ 0.03
SHMT2-232ENST00000557487 NDUFV2P19404 249 aa15.24■□□□□ 0.03
SHMT2-232ENST00000557487 AHCYP23526 432 aa15.24■□□□□ 0.03
SHMT2-232ENST00000557487 EPHA5P54756 1037 aa15.24■□□□□ 0.03
SHMT2-232ENST00000557487 TAS2R43P59537 309 aa15.24■□□□□ 0.03
SHMT2-232ENST00000557487 LSM11P83369 360 aaKnown RBP eCLIP15.24■□□□□ 0.03
SHMT2-232ENST00000557487 TGM3Q08188 693 aa15.24■□□□□ 0.03
SHMT2-232ENST00000557487 SLC9A5Q14940 896 aa15.24■□□□□ 0.03
SHMT2-232ENST00000557487 COL28A1Q2UY09 1125 aa15.24■□□□□ 0.03
SHMT2-232ENST00000557487 IDNKQ5T6J7 187 aa15.24■□□□□ 0.03
SHMT2-232ENST00000557487 LUZP2Q86TE4 346 aa15.24■□□□□ 0.03
SHMT2-232ENST00000557487 AMIGO1Q86WK6 493 aa15.24■□□□□ 0.03
SHMT2-232ENST00000557487 SORCS1Q8WY21 1168 aa15.24■□□□□ 0.03
SHMT2-232ENST00000557487 AHCYL2Q96HN2 611 aaKnown RBP15.24■□□□□ 0.03
SHMT2-232ENST00000557487 DPAGT1Q9H3H5 408 aa15.24■□□□□ 0.03
SHMT2-232ENST00000557487 TRIM36Q9NQ86 728 aa15.24■□□□□ 0.03
SHMT2-232ENST00000557487 SEMA4GQ9NTN9 838 aa15.24■□□□□ 0.03
SHMT2-232ENST00000557487 ENTPD4Q9Y227 616 aa15.24■□□□□ 0.03
SHMT2-232ENST00000557487 LEUTXA8MZ59 168 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 B8ZZF3 427 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 H7BY64 318 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 K7ESM1 405 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 SLC9A3R1O14745 358 aaPredicted RBP15.23■□□□□ 0.03
SHMT2-232ENST00000557487 HRO43593 1189 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 ANXA3P12429 323 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 PAICSP22234 425 aaKnown RBP15.23■□□□□ 0.03
SHMT2-232ENST00000557487 AGFG1P52594 562 aaKnown RBP15.23■□□□□ 0.03
SHMT2-232ENST00000557487 PER3P56645 1201 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 LASP1Q14847 261 aaKnown RBP15.23■□□□□ 0.03
SHMT2-232ENST00000557487 ZNF77Q15935 545 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 ZNF791Q3KP31 576 aaPredicted RBP15.23■□□□□ 0.03
SHMT2-232ENST00000557487 POM121L1PQ3SYA9 428 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 TMEM52BQ4KMG9 183 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 CLEC12AQ5QGZ9 265 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 KIAA1161Q6NSJ0 714 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 ADCK2Q7Z695 626 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 C11orf74Q86VG3 221 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 KLBQ86Z14 1044 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 GPALPP1Q8IXQ4 340 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 KREMEN2Q8NCW0 462 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 OR4M2Q8NGB6 313 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 PRAP1Q96NZ9 151 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 ZBP1Q9H171 429 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 ABCG5Q9H222 651 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 ENAMQ9NRM1 1142 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 IMP3Q9NV31 184 aaKnown RBP15.23■□□□□ 0.03
SHMT2-232ENST00000557487 CNIH4Q9P003 139 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 RABL2AQ9UBK7 228 aaPredicted RBP15.23■□□□□ 0.03
SHMT2-232ENST00000557487 RABL2BQ9UNT1 228 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 A0A0A6YYJ9 748 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms