RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 SLC38A2Q96QD8 506 aa16.56■□□□□ 0.24
XRCC3-218ENST00000557439 ARHGAP9Q9BRR9 750 aa16.56■□□□□ 0.24
XRCC3-218ENST00000557439 RSPH9Q9H1X1 276 aaPredicted RBP16.56■□□□□ 0.24
XRCC3-218ENST00000557439 IGFLR1Q9H665 355 aa16.56■□□□□ 0.24
XRCC3-218ENST00000557439 FGF20Q9NP95 211 aaPredicted RBP16.56■□□□□ 0.24
XRCC3-218ENST00000557439 CD93Q9NPY3 652 aa16.56■□□□□ 0.24
XRCC3-218ENST00000557439 TBC1D29Q9UFV1 150 aa16.56■□□□□ 0.24
XRCC3-218ENST00000557439 SLC7A7Q9UM01 511 aa16.56■□□□□ 0.24
XRCC3-218ENST00000557439 PLA2G10O15496 165 aa16.55■□□□□ 0.24
XRCC3-218ENST00000557439 CA3P07451 260 aa16.55■□□□□ 0.24
XRCC3-218ENST00000557439 AHRP35869 848 aa16.55■□□□□ 0.24
XRCC3-218ENST00000557439 DMPKQ09013 629 aa16.55■□□□□ 0.24
XRCC3-218ENST00000557439 TPBGQ13641 420 aa16.55■□□□□ 0.24
XRCC3-218ENST00000557439 GPR68Q15743 365 aa16.55■□□□□ 0.24
XRCC3-218ENST00000557439 BHLHB9Q6PI77 547 aa16.55■□□□□ 0.24
XRCC3-218ENST00000557439 ZNF485Q8NCK3 441 aa16.55■□□□□ 0.24
XRCC3-218ENST00000557439 TTLQ8NG68 377 aa16.55■□□□□ 0.24
XRCC3-218ENST00000557439 PIGXQ8TBF5 258 aa16.55■□□□□ 0.24
XRCC3-218ENST00000557439 SFXN5Q8TD22 340 aa16.55■□□□□ 0.24
XRCC3-218ENST00000557439 SPRYD4Q8WW59 207 aaPredicted RBP16.55■□□□□ 0.24
XRCC3-218ENST00000557439 PRRG3Q9BZD7 231 aa16.55■□□□□ 0.24
XRCC3-218ENST00000557439 ISG20L2Q9H9L3 353 aaKnown RBP16.55■□□□□ 0.24
XRCC3-218ENST00000557439 FBXO34Q9NWN3 711 aa16.55■□□□□ 0.24
XRCC3-218ENST00000557439 DPP7Q9UHL4 492 aa16.55■□□□□ 0.24
XRCC3-218ENST00000557439 ZNF780BQ9Y6R6 833 aa16.55■□□□□ 0.24
XRCC3-218ENST00000557439 TMEM129A0AVI4 362 aa16.55■□□□□ 0.24
XRCC3-218ENST00000557439 POM121BA6NF01 834 aa16.55■□□□□ 0.24
XRCC3-218ENST00000557439 SURF4O15260 269 aa16.55■□□□□ 0.24
XRCC3-218ENST00000557439 ATP6V1E1P36543 226 aa16.55■□□□□ 0.24
XRCC3-218ENST00000557439 SCN1BQ07699 218 aa16.55■□□□□ 0.24
XRCC3-218ENST00000557439 ST3GAL3Q11203 375 aa16.55■□□□□ 0.24
XRCC3-218ENST00000557439 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.55■□□□□ 0.24
XRCC3-218ENST00000557439 DEFB134Q4QY38 66 aa16.55■□□□□ 0.24
XRCC3-218ENST00000557439 DDI2Q5TDH0 399 aa16.55■□□□□ 0.24
XRCC3-218ENST00000557439 FRRS1Q6ZNA5 592 aa16.55■□□□□ 0.24
XRCC3-218ENST00000557439 RASSF6Q6ZTQ3 369 aa16.55■□□□□ 0.24
XRCC3-218ENST00000557439 MARCH9Q86YJ5 346 aa16.55■□□□□ 0.24
XRCC3-218ENST00000557439 KLBQ86Z14 1044 aa16.55■□□□□ 0.24
XRCC3-218ENST00000557439 SIRT6Q8N6T7 355 aa16.55■□□□□ 0.24
XRCC3-218ENST00000557439 UBASH3BQ8TF42 649 aa16.55■□□□□ 0.24
XRCC3-218ENST00000557439 CHAC2Q8WUX2 184 aa16.55■□□□□ 0.24
XRCC3-218ENST00000557439 SLC41A3Q96GZ6 507 aa16.55■□□□□ 0.24
XRCC3-218ENST00000557439 SECISBP2Q96T21 854 aaKnown RBP16.55■□□□□ 0.24
XRCC3-218ENST00000557439 SLC17A9Q9BYT1 436 aa16.55■□□□□ 0.24
XRCC3-218ENST00000557439 HINT3Q9NQE9 182 aaKnown RBP16.55■□□□□ 0.24
XRCC3-218ENST00000557439 KDM4EB2RXH2 506 aaPredicted RBP16.54■□□□□ 0.24
XRCC3-218ENST00000557439 POLR1CO15160 346 aaPredicted RBP16.54■□□□□ 0.24
XRCC3-218ENST00000557439 KIR2DL3P43628 341 aa16.54■□□□□ 0.24
XRCC3-218ENST00000557439 TMEM31Q5JXX7 168 aa16.54■□□□□ 0.24
XRCC3-218ENST00000557439 FCRLBQ6BAA4 426 aa16.54■□□□□ 0.24
XRCC3-218ENST00000557439 CPOQ8IVL8 374 aa16.54■□□□□ 0.24
XRCC3-218ENST00000557439 CLDN22Q8N7P3 220 aa16.54■□□□□ 0.24
XRCC3-218ENST00000557439 MCOLN1Q9GZU1 580 aa16.54■□□□□ 0.24
XRCC3-218ENST00000557439 RANGRFQ9HD47 186 aaPredicted RBP16.54■□□□□ 0.24
XRCC3-218ENST00000557439 DOCK8Q8NF50 2099 aa16.54■□□□□ 0.24
XRCC3-218ENST00000557439 P2RX6O15547 441 aa16.54■□□□□ 0.24
XRCC3-218ENST00000557439 PPP2CBP62714 309 aa16.54■□□□□ 0.24
XRCC3-218ENST00000557439 PPP2CAP67775 309 aa16.54■□□□□ 0.24
XRCC3-218ENST00000557439 MAPK14Q16539 360 aa16.54■□□□□ 0.24
XRCC3-218ENST00000557439 TRMT12Q53H54 448 aaKnown RBP16.54■□□□□ 0.24
XRCC3-218ENST00000557439 AADACL4Q5VUY2 407 aa16.54■□□□□ 0.24
XRCC3-218ENST00000557439 CNIH2Q6PI25 160 aa16.54■□□□□ 0.24
XRCC3-218ENST00000557439 MTSS1LQ765P7 747 aa16.54■□□□□ 0.24
XRCC3-218ENST00000557439 OR51G2Q8NGK0 314 aa16.54■□□□□ 0.24
XRCC3-218ENST00000557439 SETD6Q8TBK2 473 aa16.54■□□□□ 0.24
XRCC3-218ENST00000557439 SENP5Q96HI0 755 aaPredicted RBP16.54■□□□□ 0.24
XRCC3-218ENST00000557439 SMAD5Q99717 465 aaKnown RBP16.54■□□□□ 0.24
XRCC3-218ENST00000557439 HCAR1Q9BXC0 346 aa16.54■□□□□ 0.24
XRCC3-218ENST00000557439 ATP13A2Q9NQ11 1180 aa16.54■□□□□ 0.24
XRCC3-218ENST00000557439 TBC1D3DA0A087WVF3 549 aa16.53■□□□□ 0.24
XRCC3-218ENST00000557439 TBC1D3IA0A087WXS9 549 aa16.53■□□□□ 0.24
XRCC3-218ENST00000557439 TBC1D3EA0A087X179 549 aa16.53■□□□□ 0.24
XRCC3-218ENST00000557439 TBC1D3KA0A087X1G2 549 aa16.53■□□□□ 0.24
XRCC3-218ENST00000557439 TBC1D3FA6NER0 549 aaPredicted RBP16.53■□□□□ 0.24
XRCC3-218ENST00000557439 TBC1D3LB9A6J9 549 aa16.53■□□□□ 0.24
XRCC3-218ENST00000557439 STK25O00506 426 aa16.53■□□□□ 0.24
XRCC3-218ENST00000557439 TBC1D3HP0C7X1 549 aa16.53■□□□□ 0.24
XRCC3-218ENST00000557439 CSTF1Q05048 431 aaKnown RBP16.53■□□□□ 0.24
XRCC3-218ENST00000557439 GNA13Q14344 377 aa16.53■□□□□ 0.24
XRCC3-218ENST00000557439 DUSP5Q16690 384 aa16.53■□□□□ 0.24
XRCC3-218ENST00000557439 PUS10Q3MIT2 529 aaKnown RBP16.53■□□□□ 0.24
XRCC3-218ENST00000557439 TBC1D3GQ6DHY5 549 aa16.53■□□□□ 0.24
XRCC3-218ENST00000557439 VASNQ6EMK4 673 aa16.53■□□□□ 0.24
XRCC3-218ENST00000557439 TBC1D3CQ6IPX1 549 aa16.53■□□□□ 0.24
XRCC3-218ENST00000557439 PAMR1Q6UXH9 720 aa16.53■□□□□ 0.24
XRCC3-218ENST00000557439 WDR88Q6ZMY6 472 aa16.53■□□□□ 0.24
XRCC3-218ENST00000557439 ZNF836Q6ZNA1 936 aa16.53■□□□□ 0.24
XRCC3-218ENST00000557439 MRGPREQ86SM8 312 aa16.53■□□□□ 0.24
XRCC3-218ENST00000557439 TBC1D3Q8IZP1 549 aaPredicted RBP16.53■□□□□ 0.24
XRCC3-218ENST00000557439 LINC00471Q8N535 108 aa16.53■□□□□ 0.24
XRCC3-218ENST00000557439 LCN9Q8WX39 176 aa16.53■□□□□ 0.24
XRCC3-218ENST00000557439 C10orf90Q96M02 699 aa16.53■□□□□ 0.24
XRCC3-218ENST00000557439 ZNF649Q9BS31 505 aa16.53■□□□□ 0.24
XRCC3-218ENST00000557439 TIMM29Q9BSF4 260 aa16.53■□□□□ 0.24
XRCC3-218ENST00000557439 ACTRT3Q9BYD9 372 aa16.53■□□□□ 0.24
XRCC3-218ENST00000557439 DPH1Q9BZG8 443 aa16.53■□□□□ 0.24
XRCC3-218ENST00000557439 CAPN10Q9HC96 672 aa16.53■□□□□ 0.24
XRCC3-218ENST00000557439 B3GAT2Q9NPZ5 323 aa16.53■□□□□ 0.24
XRCC3-218ENST00000557439 ARHGEF17Q96PE2 2063 aaPredicted RBP16.53■□□□□ 0.24
XRCC3-218ENST00000557439 A0A1B0GVC2 190 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms