RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 BEST4Q8NFU0 473 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 C8orf46Q8TAG6 207 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 U2AF1L4Q8WU68 220 aaKnown RBP2.81□□□□□ -1.96
VRK1-207ENST00000557352 SCFD1Q8WVM8 642 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 BPIFA2Q96DR5 249 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 ERO1AQ96HE7 468 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 PANX2Q96RD6 677 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 TSG101Q99816 390 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 PAXXQ9BUH6 204 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 THUMPD3Q9BV44 507 aaKnown RBP2.81□□□□□ -1.96
VRK1-207ENST00000557352 NUP58Q9BVL2 599 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 TRIM7Q9C029 511 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 XPO4Q9C0E2 1151 aaKnown RBP2.81□□□□□ -1.96
VRK1-207ENST00000557352 PORCNQ9H237 461 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 BLZF1Q9H2G9 400 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 TMEM206Q9H813 350 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 ZNF302Q9NR11 478 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 SAMSN1Q9NSI8 373 aaKnown RBP2.81□□□□□ -1.96
VRK1-207ENST00000557352 DMAC2Q9NW81 257 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 WRAP73Q9P2S5 460 aaPredicted RBP2.81□□□□□ -1.96
VRK1-207ENST00000557352 POMT1Q9Y6A1 747 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 VWA8A3KMH1 1905 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 ALPK3Q96L96 1907 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 DOCK4Q8N1I0 1966 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 CEP350Q5VT06 3117 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 MYO9BQ13459 2157 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 MYO18AQ92614 2054 aaKnown RBP2.8□□□□□ -1.96
VRK1-207ENST00000557352 CHD5Q8TDI0 1954 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 MYO16Q9Y6X6 1858 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 KIAA1671Q9BY89 1806 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 OR5H15A6NDH6 313 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 TNFSF11O14788 317 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 CETN3O15182 167 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 STX10O60499 249 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 SNAI1O95863 264 aaPredicted RBP2.8□□□□□ -1.96
VRK1-207ENST00000557352 TPM2P07951 284 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 TPM1P09493 284 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 OR9G9P0C7N8 305 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 LBPP18428 481 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 CASP1P29466 404 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 SRD5A2P31213 254 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 GTF2H1P32780 548 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 TCF7P36402 384 aaPredicted RBP2.8□□□□□ -1.96
VRK1-207ENST00000557352 ARL2P36404 184 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 ALDH3B1P43353 468 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 TNFRSF4P43489 277 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 PRMT2P55345 433 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 ERVPABLB-1P60509 514 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 RPP38P78345 283 aaKnown RBP2.8□□□□□ -1.96
VRK1-207ENST00000557352 RBP5P82980 135 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 PRKCEQ02156 737 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 ARHGAP1Q07960 439 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 BFSP1Q12934 665 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 MXD4Q14582 209 aaPredicted RBP2.8□□□□□ -1.96
VRK1-207ENST00000557352 KYAT1Q16773 422 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 TPD52L1Q16890 204 aaPredicted RBP2.8□□□□□ -1.96
VRK1-207ENST00000557352 ARMCX4Q5H9R4 360 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 TRAT1Q6PIZ9 186 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 GALNTL5Q7Z4T8 443 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 KLHL7Q8IXQ5 586 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 SLC22A18ASQ8N1D0 253 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 SIX6OS1Q8N1H7 587 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 ELMOD1Q8N336 334 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 TMEM161BQ8NDZ6 487 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 OR13C5Q8NGS8 318 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 HEXDCQ8WVB3 486 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 TCP11Q8WWU5 503 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 IFT74Q96LB3 600 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 CCDC43Q96MW1 224 aaKnown RBP2.8□□□□□ -1.96
VRK1-207ENST00000557352 ACCSQ96QU6 501 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 PLIN2Q99541 437 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 TUBGCP2Q9BSJ2 902 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 FAM124BQ9H5Z6 455 aaPredicted RBP2.8□□□□□ -1.96
VRK1-207ENST00000557352 AZI2Q9H6S1 392 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 XPNPEP1Q9NQW7 623 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 AGPAT3Q9NRZ7 376 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 NRBP2Q9NSY0 501 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 IFNKQ9P0W0 207 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 NOCTQ9UK39 431 aaKnown RBP2.8□□□□□ -1.96
VRK1-207ENST00000557352 EXOC7Q9UPT5 735 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 PTPRSQ13332 1948 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 ANAPC1Q9H1A4 1944 aa2.8□□□□□ -1.96
VRK1-207ENST00000557352 OBSL1O75147 1896 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 NRCAMQ92823 1304 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 C2orf92A0A1B0GVN3 265 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 MBLAC1A4D2B0 266 aaPredicted RBP2.79□□□□□ -1.96
VRK1-207ENST00000557352 RSPH10B2B2RC85 870 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 KIF2AO00139 706 aaPredicted RBP2.79□□□□□ -1.96
VRK1-207ENST00000557352 HAS3O00219 553 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 CHMP2AO43633 222 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 ACSL4O60488 711 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 N4BP1O75113 896 aaKnown RBP2.79□□□□□ -1.96
VRK1-207ENST00000557352 DUSP11O75319 330 aaKnown RBP2.79□□□□□ -1.96
VRK1-207ENST00000557352 SIX3O95343 332 aaPredicted RBP2.79□□□□□ -1.96
VRK1-207ENST00000557352 LCA5LO95447 670 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 CALCAP01258 141 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 GYPCP04921 128 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 LGALS2P05162 132 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 PTMAP06454 111 aaKnown RBP2.79□□□□□ -1.96
VRK1-207ENST00000557352 PGK2P07205 417 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms