RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 RELL2Q8NC24 303 aaPredicted RBP8.41□□□□□ -1.06
SYNE3-205ENST00000557275 LRCH3Q96II8 777 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 PINK1Q9BXM7 581 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 GAREM1Q9H706 876 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 SIAEQ9HAT2 523 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 TESQ9UGI8 421 aaKnown RBP8.41□□□□□ -1.06
SYNE3-205ENST00000557275 SULT1C4O75897 302 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 RAB6AP20340 208 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 NPAS4Q8IUM7 802 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 ATF6BQ99941 703 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 LRIT2A6NDA9 550 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 DVL2O14641 736 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 ARRB1P49407 418 aaPredicted RBP8.41□□□□□ -1.06
SYNE3-205ENST00000557275 SERINC5Q86VE9 423 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 TXNDC5Q8NBS9 432 aaKnown RBP8.41□□□□□ -1.06
SYNE3-205ENST00000557275 OR13C5Q8NGS8 318 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 OR13C2Q8NGS9 318 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 CCDC74BQ96LY2 380 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 GPR20Q99678 358 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 WDR77Q9BQA1 342 aaPredicted RBP8.41□□□□□ -1.06
SYNE3-205ENST00000557275 NDFIP1Q9BT67 221 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 NFAT5O94916 1531 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 CILPO75339 1184 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 EDNRBP24530 442 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 SUOXP51687 545 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 MAP1SQ66K74 1059 aaPredicted RBP8.41□□□□□ -1.06
SYNE3-205ENST00000557275 RHEBL1Q8TAI7 183 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 BIRC7Q96CA5 298 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 SGTBQ96EQ0 304 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 FCRL5Q96RD9 977 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 SLC2A6Q9UGQ3 507 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 ADGRB2O60241 1585 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 SLC31A2O15432 143 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 ALPIP09923 528 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 CHRNEQ04844 493 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 ZNF852Q6ZMS4 543 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 OR51T1Q8NGJ9 327 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 LILRB4Q8NHJ6 448 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 TRMT61BQ9BVS5 477 aaKnown RBP8.41□□□□□ -1.06
SYNE3-205ENST00000557275 NGBQ9NPG2 151 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 ZNF230Q9UIE0 474 aaPredicted RBP8.41□□□□□ -1.06
SYNE3-205ENST00000557275 PCDHAC2Q9Y5I4 1007 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 DUOX1Q9NRD9 1551 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 SLC16A5O15375 505 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 CHRM5P08912 532 aaPredicted RBP8.41□□□□□ -1.06
SYNE3-205ENST00000557275 TRHRP34981 398 aaPredicted RBP8.41□□□□□ -1.06
SYNE3-205ENST00000557275 RAC1P63000 192 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 NOGQ13253 232 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 PRAMEF18Q5VWM3 479 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 XKR5Q6UX68 686 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 ADAMTS14Q8WXS8 1223 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 TLL1O43897 1013 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 LRCH4O75427 683 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 PTGER4P35408 488 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 SLC6A8P48029 635 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 GSK3AP49840 483 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 MRPS34P82930 218 aaKnown RBP8.41□□□□□ -1.06
SYNE3-205ENST00000557275 PTPRCAPQ14761 206 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 SIDT2Q8NBJ9 832 aaKnown RBP8.41□□□□□ -1.06
SYNE3-205ENST00000557275 IL36AQ9UHA7 158 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 LOC105369274A0A096LPK9 316 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 USP2O75604 605 aaPredicted RBP8.4□□□□□ -1.06
SYNE3-205ENST00000557275 LYPLA2O95372 231 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 MGST1P10620 155 aaKnown RBP8.4□□□□□ -1.06
SYNE3-205ENST00000557275 KEAP1Q14145 624 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 RNF130Q86XS8 419 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 OR4N4Q8N0Y3 316 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 OR4F6Q8NGB9 312 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 OR4N2Q8NGD1 307 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 NKX3-1Q99801 234 aaPredicted RBP8.4□□□□□ -1.06
SYNE3-205ENST00000557275 WDR6Q9NNW5 1121 aaKnown RBP8.4□□□□□ -1.06
SYNE3-205ENST00000557275 PPM1HQ9ULR3 514 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 HTR1EP28566 365 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 BMI1P35226 326 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 OR9K2Q8NGE7 335 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 SGCZQ96LD1 299 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 ANKRD19PQ9H560 264 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 IGFLR1Q9H665 355 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 SLC35D1Q9NTN3 355 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 ATP1B2P14415 290 aaPredicted RBP8.4□□□□□ -1.06
SYNE3-205ENST00000557275 TARBP2Q15633 366 aaKnown RBP8.4□□□□□ -1.06
SYNE3-205ENST00000557275 PAQR8Q8TEZ7 354 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 ARPC5LQ9BPX5 153 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 CRLF2Q9HC73 371 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 OR2T1O43869 369 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 RAB40BQ12829 278 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 NRXN1Q9ULB1 1477 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 SNRNP70P08621 437 aaKnown RBP8.4□□□□□ -1.06
SYNE3-205ENST00000557275 SUB1P53999 127 aaKnown RBP eCLIP8.4□□□□□ -1.06
SYNE3-205ENST00000557275 RCAN2Q14206 197 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 PPM1JQ5JR12 505 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 UBE2UQ5VVX9 321 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.4□□□□□ -1.06
SYNE3-205ENST00000557275 SLC24A5Q71RS6 500 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 CDH20Q9HBT6 801 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 SPO11Q9Y5K1 396 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 IQSEC2Q5JU85 1478 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 LOC285095A0A1B0GVY8 99 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 CBY3A6NI87 242 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 SERPINA5P05154 406 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms