RNA–Protein interactions for RNA: ENST00000556839.5

RALGAPA1-215, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 3

Gene RALGAPA1, Length 1,305 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-215	ENST00000556839	FER1L6-AS2	Q96M78	137 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	RNF145	Q96MT1	663 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	BTBD9	Q96Q07	612 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	FCRL5	Q96RD9	977 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	SEMA3C	Q99985	751 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	ZNF2	Q9BSG1	426 aa	Predicted RBP	4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	PCGF1	Q9BSM1	259 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	SYT17	Q9BSW7	474 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	MND1	Q9BWT6	205 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	TM2D2	Q9BX73	214 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	OSBPL8	Q9BZF1	889 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	TRIM9	Q9C026	710 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	NMUR2	Q9GZQ4	415 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	TMEM117	Q9H0C3	514 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	VCX2	Q9H322	139 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	RGCC	Q9H4X1	137 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	ADGRL3	Q9HAR2	1447 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	NGB	Q9NPG2	151 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	MSRB1	Q9NZV6	116 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	CCDC59	Q9P031	241 aa	Known RBP	4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	SLC25A13	Q9UJS0	675 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	DBNL	Q9UJU6	430 aa	Known RBP	4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	TNN	Q9UQP3	1299 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	ZHX2	Q9Y6X8	837 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839		U3KQV3	271 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	AK9	Q5TCS8	1911 aa		4.9	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	SETD1A	O15047	1707 aa	Known RBP	4.9	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	ZNF609	O15014	1411 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	TECPR2	O15040	1411 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	PTPRU	Q92729	1446 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	SLC5A10	A0PJK1	596 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	PDZK1P1	A8MUH7	402 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	KDM4E	B2RXH2	506 aa	Predicted RBP	4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	MCIDAS	D6RGH6	385 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	LGALS8	O00214	317 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	FOXE1	O00358	373 aa	Predicted RBP	4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	ZBTB5	O15062	677 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	STX7	O15400	261 aa	Known RBP	4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	TLX3	O43711	291 aa	Predicted RBP	4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	AVIL	O75366	819 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	SEC24A	O95486	1093 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	ANGPTL1	O95841	491 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	GOT2	P00505	430 aa	Known RBP	4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	PCCB	P05166	539 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	HOXC4	P09017	264 aa	Predicted RBP	4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	SMIM18	P0DKX4	95 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	CDH1	P12830	882 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	LBP	P18428	481 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	PTPN3	P26045	913 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	PAX6	P26367	422 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	DCK	P27707	260 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	HNRNPH3	P31942	346 aa	Known RBP	4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	ARRB2	P32121	409 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	MC5R	P33032	325 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	RPL35	P42766	123 aa	Known RBP	4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	GMPS	P49915	693 aa	Predicted RBP	4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	HLCS	P50747	726 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	WDR5	P61964	334 aa	Known RBP	4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	NUTF2	P61970	127 aa	Known RBP	4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	ESRRG	P62508	458 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	GRB7	Q14451	532 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	PTGR1	Q14914	329 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	NFATC4	Q14934	902 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	FAM189A2	Q15884	450 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	SLC15A2	Q16348	729 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	NADK2	Q4G0N4	442 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	TEX44	Q53QW1	395 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	FAM46C	Q5VWP2	391 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	OR6B2	Q6IFH4	312 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	SLC25A25	Q6KCM7	469 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	NANOGP8	Q6NSW7	305 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	CCDC137	Q6PK04	289 aa	Known RBP	4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	GLDN	Q6ZMI3	551 aa	Predicted RBP	4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	CCNI2	Q6ZMN8	369 aa	Predicted RBP	4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	PRSS45	Q7RTY3	260 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	GPAT4	Q86UL3	456 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	SERINC5	Q86VE9	423 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	IGFN1	Q86VF2	1251 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	DHX40	Q8IX18	779 aa	Known RBP	4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	GPALPP1	Q8IXQ4	340 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	KATNAL2	Q8IYT4	538 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	SIX6OS1	Q8N1H7	587 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	METTL4	Q8N3J2	472 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	IQCF1	Q8N6M8	205 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	ACBD4	Q8NC06	268 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	SLC44A5	Q8NCS7	719 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	OR6J1	Q8NGC5	347 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	CHURC1	Q8WUH1	139 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	RLN3	Q8WXF3	142 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	PHYHIP	Q92561	330 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	NEUROG1	Q92886	237 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	TMCO6	Q96DC7	493 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	SAMD8	Q96LT4	415 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	C10orf90	Q96M02	699 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	WFIKKN1	Q96NZ8	548 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	TEFM	Q96QE5	360 aa	Known RBP	4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	OR2A14	Q96R47	310 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	SERPINI1	Q99574	410 aa		4.9	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	P2RY13	Q9BPV8	354 aa		4.9	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms