RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 CDIP1Q9H305 208 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 TEX10Q9NXF1 929 aaPredicted RBP9.08□□□□□ -0.96
SCFD1-220ENST00000556486 KLHL28Q9NXS3 571 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 ZNF639Q9UID6 485 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 FBXL7Q9UJT9 491 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 CES1P1Q9UKY3 287 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 TMCO1Q9UM00 188 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 CFL2Q9Y281 166 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 A0A096LPK6 155 aa9.07□□□□□ -0.96
SCFD1-220ENST00000556486 LRRC14BA6NHZ5 514 aa9.07□□□□□ -0.96
SCFD1-220ENST00000556486 STX16-NPEPL1H3BU86 382 aa9.07□□□□□ -0.96
SCFD1-220ENST00000556486 STX16O14662 325 aa9.07□□□□□ -0.96
SCFD1-220ENST00000556486 TO15178 435 aa9.07□□□□□ -0.96
SCFD1-220ENST00000556486 GUCY1B2O75343 617 aa9.07□□□□□ -0.96
SCFD1-220ENST00000556486 ERN1O75460 977 aaKnown RBP9.07□□□□□ -0.96
SCFD1-220ENST00000556486 SIX3O95343 332 aaPredicted RBP9.07□□□□□ -0.96
SCFD1-220ENST00000556486 TMIGD3P0DMS9 266 aaPredicted RBP9.07□□□□□ -0.96
SCFD1-220ENST00000556486 CPMP14384 443 aa9.07□□□□□ -0.96
SCFD1-220ENST00000556486 PORP16435 677 aaPredicted RBP9.07□□□□□ -0.96
SCFD1-220ENST00000556486 GPX3P22352 226 aa9.07□□□□□ -0.96
SCFD1-220ENST00000556486 OPRM1P35372 400 aa9.07□□□□□ -0.96
SCFD1-220ENST00000556486 HTR3AP46098 478 aa9.07□□□□□ -0.96
SCFD1-220ENST00000556486 PTH2RP49190 550 aa9.07□□□□□ -0.96
SCFD1-220ENST00000556486 SERPINB8P50452 374 aa9.07□□□□□ -0.96
SCFD1-220ENST00000556486 XKP51811 444 aa9.07□□□□□ -0.96
SCFD1-220ENST00000556486 SRSF2Q01130 221 aaKnown RBP9.07□□□□□ -0.96
SCFD1-220ENST00000556486 MGAT2Q10469 447 aa9.07□□□□□ -0.96
SCFD1-220ENST00000556486 TRAF3Q13114 568 aa9.07□□□□□ -0.96
SCFD1-220ENST00000556486 GALEQ14376 348 aa9.07□□□□□ -0.96
SCFD1-220ENST00000556486 PRICKLE4Q2TBC4 344 aa9.07□□□□□ -0.96
SCFD1-220ENST00000556486 TECRLQ5HYJ1 363 aa9.07□□□□□ -0.96
SCFD1-220ENST00000556486 MROH9Q5TGP6 573 aa9.07□□□□□ -0.96
SCFD1-220ENST00000556486 HLA-DQA1Q5Y7H0 255 aa9.07□□□□□ -0.96
SCFD1-220ENST00000556486 SLC30A6Q6NXT4 461 aa9.07□□□□□ -0.96
SCFD1-220ENST00000556486 SLC48A1Q6P1K1 146 aa9.07□□□□□ -0.96
SCFD1-220ENST00000556486 PAGE2Q7Z2X7 111 aa9.07□□□□□ -0.96
SCFD1-220ENST00000556486 METTL4Q8N3J2 472 aa9.07□□□□□ -0.96
SCFD1-220ENST00000556486 MFSD4AQ8N468 514 aa9.07□□□□□ -0.96
SCFD1-220ENST00000556486 ZNF610Q8N9Z0 462 aa9.07□□□□□ -0.96
SCFD1-220ENST00000556486 OR52B6Q8NGF0 335 aa9.07□□□□□ -0.96
SCFD1-220ENST00000556486 HGDQ93099 445 aa9.07□□□□□ -0.96
SCFD1-220ENST00000556486 UCN3Q969E3 161 aa9.07□□□□□ -0.96
SCFD1-220ENST00000556486 PIGTQ969N2 578 aa9.07□□□□□ -0.96
SCFD1-220ENST00000556486 DACH2Q96NX9 599 aa9.07□□□□□ -0.96
SCFD1-220ENST00000556486 LRRC1Q9BTT6 524 aa9.07□□□□□ -0.96
SCFD1-220ENST00000556486 NXF5Q9H1B4 397 aaKnown RBP9.07□□□□□ -0.96
SCFD1-220ENST00000556486 SMURF1Q9HCE7 757 aa9.07□□□□□ -0.96
SCFD1-220ENST00000556486 AHSPQ9NZD4 102 aa9.07□□□□□ -0.96
SCFD1-220ENST00000556486 CR1P17927 2039 aa9.07□□□□□ -0.96
SCFD1-220ENST00000556486 RAI1Q7Z5J4 1906 aaPredicted RBP9.06□□□□□ -0.96
SCFD1-220ENST00000556486 C1orf226A1L170 272 aa9.06□□□□□ -0.96
SCFD1-220ENST00000556486 GOLGA6L10A6NI86 522 aa9.06□□□□□ -0.96
SCFD1-220ENST00000556486 DEFB108AA8MXU0 73 aa9.06□□□□□ -0.96
SCFD1-220ENST00000556486 ZNF561-AS1K7EIQ3 104 aa9.06□□□□□ -0.96
SCFD1-220ENST00000556486 GBAP04062 536 aa9.06□□□□□ -0.96
SCFD1-220ENST00000556486 KLK1P06870 262 aa9.06□□□□□ -0.96
SCFD1-220ENST00000556486 DRD5P21918 477 aa9.06□□□□□ -0.96
SCFD1-220ENST00000556486 PTGDSP41222 190 aa9.06□□□□□ -0.96
SCFD1-220ENST00000556486 NAGLUP54802 743 aa9.06□□□□□ -0.96
SCFD1-220ENST00000556486 PCBP3P57721 371 aaKnown RBP9.06□□□□□ -0.96
SCFD1-220ENST00000556486 EEF1A1P68104 462 aaKnown RBP9.06□□□□□ -0.96
SCFD1-220ENST00000556486 PSPHP78330 225 aa9.06□□□□□ -0.96
SCFD1-220ENST00000556486 TNK1Q13470 666 aa9.06□□□□□ -0.96
SCFD1-220ENST00000556486 TRADDQ15628 312 aa9.06□□□□□ -0.96
SCFD1-220ENST00000556486 ACKR1Q16570 336 aa9.06□□□□□ -0.96
SCFD1-220ENST00000556486 EIPR1Q53HC9 387 aa9.06□□□□□ -0.96
SCFD1-220ENST00000556486 EEF1A1P5Q5VTE0 462 aa9.06□□□□□ -0.96
SCFD1-220ENST00000556486 NUP54Q7Z3B4 507 aa9.06□□□□□ -0.96
SCFD1-220ENST00000556486 FAM83FQ8NEG4 500 aaPredicted RBP9.06□□□□□ -0.96
SCFD1-220ENST00000556486 RNF138Q8WVD3 245 aa9.06□□□□□ -0.96
SCFD1-220ENST00000556486 SMPDL3BQ92485 455 aa9.06□□□□□ -0.96
SCFD1-220ENST00000556486 ABTB1Q969K4 478 aaPredicted RBP9.06□□□□□ -0.96
SCFD1-220ENST00000556486 UTP4Q969X6 686 aaKnown RBP9.06□□□□□ -0.96
SCFD1-220ENST00000556486 INTS12Q96CB8 462 aaKnown RBP9.06□□□□□ -0.96
SCFD1-220ENST00000556486 ERP27Q96DN0 273 aa9.06□□□□□ -0.96
SCFD1-220ENST00000556486 ZC3HAV1LQ96H79 300 aaKnown RBP9.06□□□□□ -0.96
SCFD1-220ENST00000556486 WFIKKN1Q96NZ8 548 aa9.06□□□□□ -0.96
SCFD1-220ENST00000556486 PIP5K1AQ99755 562 aa9.06□□□□□ -0.96
SCFD1-220ENST00000556486 ELAC2Q9BQ52 826 aaKnown RBP9.06□□□□□ -0.96
SCFD1-220ENST00000556486 SFXN3Q9BWM7 321 aa9.06□□□□□ -0.96
SCFD1-220ENST00000556486 C1QTNF3Q9BXJ4 246 aa9.06□□□□□ -0.96
SCFD1-220ENST00000556486 OR2B2Q9GZK3 357 aa9.06□□□□□ -0.96
SCFD1-220ENST00000556486 NOL11Q9H8H0 719 aaKnown RBP9.06□□□□□ -0.96
SCFD1-220ENST00000556486 BRF2Q9HAW0 419 aa9.06□□□□□ -0.96
SCFD1-220ENST00000556486 ZBTB26Q9HCK0 441 aa9.06□□□□□ -0.96
SCFD1-220ENST00000556486 ZDHHC18Q9NUE0 388 aa9.06□□□□□ -0.96
SCFD1-220ENST00000556486 AP5S1Q9NUS5 200 aa9.06□□□□□ -0.96
SCFD1-220ENST00000556486 MAT2BQ9NZL9 334 aa9.06□□□□□ -0.96
SCFD1-220ENST00000556486 PCTPQ9UKL6 214 aa9.06□□□□□ -0.96
SCFD1-220ENST00000556486 EXO1Q9UQ84 846 aaKnown RBP9.06□□□□□ -0.96
SCFD1-220ENST00000556486 DTX4Q9Y2E6 619 aa9.06□□□□□ -0.96
SCFD1-220ENST00000556486 TESMINQ9Y4I5 508 aa9.06□□□□□ -0.96
SCFD1-220ENST00000556486 OR6C70A6NIJ9 312 aa9.05□□□□□ -0.96
SCFD1-220ENST00000556486 PHF1O43189 567 aaPredicted RBP9.05□□□□□ -0.96
SCFD1-220ENST00000556486 ICOSLGO75144 302 aa9.05□□□□□ -0.96
SCFD1-220ENST00000556486 CBR3O75828 277 aa9.05□□□□□ -0.96
SCFD1-220ENST00000556486 RCBTB2O95199 551 aa9.05□□□□□ -0.96
SCFD1-220ENST00000556486 RBP1P09455 135 aa9.05□□□□□ -0.96
SCFD1-220ENST00000556486 COL6A2P12110 1019 aa9.05□□□□□ -0.96
SCFD1-220ENST00000556486 KRT15P19012 456 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms