RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 ZNF337Q9Y3M9 751 aa20.42■□□□□ 0.86
ACTN1-220ENST00000556433 PTGDR2Q9Y5Y4 395 aa20.42■□□□□ 0.86
ACTN1-220ENST00000556433 SLC22A20A6NK97 555 aa20.41■□□□□ 0.86
ACTN1-220ENST00000556433 CASKO14936 926 aa20.41■□□□□ 0.86
ACTN1-220ENST00000556433 RGS14O43566 566 aa20.41■□□□□ 0.86
ACTN1-220ENST00000556433 DIAPH2O60879 1101 aa20.41■□□□□ 0.86
ACTN1-220ENST00000556433 GOSR1O95249 250 aa20.41■□□□□ 0.86
ACTN1-220ENST00000556433 RAF1P04049 648 aa20.41■□□□□ 0.86
ACTN1-220ENST00000556433 CRHP06850 196 aa20.41■□□□□ 0.86
ACTN1-220ENST00000556433 KRT4P19013 534 aa20.41■□□□□ 0.86
ACTN1-220ENST00000556433 KLK2P20151 261 aa20.41■□□□□ 0.86
ACTN1-220ENST00000556433 PRPH2P23942 346 aa20.41■□□□□ 0.86
ACTN1-220ENST00000556433 EEFSECP57772 596 aaKnown RBP20.41■□□□□ 0.86
ACTN1-220ENST00000556433 HSPB3Q12988 150 aa20.41■□□□□ 0.86
ACTN1-220ENST00000556433 KEAP1Q14145 624 aa20.41■□□□□ 0.86
ACTN1-220ENST00000556433 GANABQ14697 944 aaKnown RBP20.41■□□□□ 0.86
ACTN1-220ENST00000556433 POU4F3Q15319 338 aa20.41■□□□□ 0.86
ACTN1-220ENST00000556433 OR2A2Q6IF42 318 aa20.41■□□□□ 0.86
ACTN1-220ENST00000556433 ANKRD26P1Q6NSI1 321 aa20.41■□□□□ 0.86
ACTN1-220ENST00000556433 ALPK1Q96QP1 1244 aa20.41■□□□□ 0.86
ACTN1-220ENST00000556433 PLEKHF2Q9H8W4 249 aa20.41■□□□□ 0.86
ACTN1-220ENST00000556433 ZFHX3Q15911 3703 aa20.4■□□□□ 0.86
ACTN1-220ENST00000556433 GXYLT2A0PJZ3 443 aa20.4■□□□□ 0.86
ACTN1-220ENST00000556433 SH3D21A4FU49 640 aa20.4■□□□□ 0.86
ACTN1-220ENST00000556433 TTC36A6NLP5 189 aa20.4■□□□□ 0.86
ACTN1-220ENST00000556433 AZIN1O14977 448 aa20.4■□□□□ 0.86
ACTN1-220ENST00000556433 SMNDC1O75940 238 aaKnown RBP eCLIP20.4■□□□□ 0.86
ACTN1-220ENST00000556433 UTS2O95399 124 aa20.4■□□□□ 0.86
ACTN1-220ENST00000556433 HRGP04196 525 aa20.4■□□□□ 0.86
ACTN1-220ENST00000556433 PRPS2P11908 318 aa20.4■□□□□ 0.86
ACTN1-220ENST00000556433 GPC1P35052 558 aa20.4■□□□□ 0.86
ACTN1-220ENST00000556433 CPOXP36551 454 aa20.4■□□□□ 0.86
ACTN1-220ENST00000556433 CLDN15P56746 228 aa20.4■□□□□ 0.86
ACTN1-220ENST00000556433 C10orf107Q8IVU9 208 aa20.4■□□□□ 0.86
ACTN1-220ENST00000556433 C4orf33Q8N1A6 199 aa20.4■□□□□ 0.86
ACTN1-220ENST00000556433 CNEP1R1Q8N9A8 125 aa20.4■□□□□ 0.86
ACTN1-220ENST00000556433 EPS8L3Q8TE67 593 aaKnown RBP20.4■□□□□ 0.86
ACTN1-220ENST00000556433 STARD4Q96DR4 205 aa20.4■□□□□ 0.86
ACTN1-220ENST00000556433 TBL1XR1Q9BZK7 514 aa20.4■□□□□ 0.86
ACTN1-220ENST00000556433 EQTNQ9NQ60 294 aa20.4■□□□□ 0.86
ACTN1-220ENST00000556433 NDRG3Q9UGV2 375 aa20.4■□□□□ 0.86
ACTN1-220ENST00000556433 FIS1Q9Y3D6 152 aa20.4■□□□□ 0.86
ACTN1-220ENST00000556433 OR2M5A3KFT3 312 aa20.39■□□□□ 0.85
ACTN1-220ENST00000556433 NPIPB8E9PQR5 432 aa20.39■□□□□ 0.85
ACTN1-220ENST00000556433 H0YC42 278 aa20.39■□□□□ 0.85
ACTN1-220ENST00000556433 LINC01387J3KSC0 135 aa20.39■□□□□ 0.85
ACTN1-220ENST00000556433 MSTNO14793 375 aa20.39■□□□□ 0.85
ACTN1-220ENST00000556433 PDPK1O15530 556 aa20.39■□□□□ 0.85
ACTN1-220ENST00000556433 AKAP10O43572 662 aa20.39■□□□□ 0.85
ACTN1-220ENST00000556433 KCNH1O95259 989 aa20.39■□□□□ 0.85
ACTN1-220ENST00000556433 ATE1O95260 518 aa20.39■□□□□ 0.85
ACTN1-220ENST00000556433 IFI6P09912 130 aa20.39■□□□□ 0.85
ACTN1-220ENST00000556433 SUCLG1P53597 346 aaKnown RBP20.39■□□□□ 0.85
ACTN1-220ENST00000556433 PRKAG1P54619 331 aa20.39■□□□□ 0.85
ACTN1-220ENST00000556433 TPD52P55327 224 aaPredicted RBP20.39■□□□□ 0.85
ACTN1-220ENST00000556433 Q6ZSR9 355 aa20.39■□□□□ 0.85
ACTN1-220ENST00000556433 GPR151Q8TDV0 419 aa20.39■□□□□ 0.85
ACTN1-220ENST00000556433 FIG4Q92562 907 aa20.39■□□□□ 0.85
ACTN1-220ENST00000556433 PIK3R3Q92569 461 aa20.39■□□□□ 0.85
ACTN1-220ENST00000556433 CIDECQ96AQ7 238 aaPredicted RBP20.39■□□□□ 0.85
ACTN1-220ENST00000556433 C1GALT1C1Q96EU7 318 aa20.39■□□□□ 0.85
ACTN1-220ENST00000556433 PIGQQ9BRB3 760 aa20.39■□□□□ 0.85
ACTN1-220ENST00000556433 MID2Q9UJV3 735 aa20.39■□□□□ 0.85
ACTN1-220ENST00000556433 H3BML4 177 aa20.38■□□□□ 0.85
ACTN1-220ENST00000556433 SEC14L5O43304 696 aa20.38■□□□□ 0.85
ACTN1-220ENST00000556433 TNFRSF21O75509 655 aa20.38■□□□□ 0.85
ACTN1-220ENST00000556433 IGKV1D-16P01601 117 aa20.38■□□□□ 0.85
ACTN1-220ENST00000556433 FAM27E3Q08E93 113 aa20.38■□□□□ 0.85
ACTN1-220ENST00000556433 C17orf67Q0P5P2 114 aa20.38■□□□□ 0.85
ACTN1-220ENST00000556433 DEFB113Q30KQ7 82 aa20.38■□□□□ 0.85
ACTN1-220ENST00000556433 GLYR1Q49A26 553 aaPredicted RBP20.38■□□□□ 0.85
ACTN1-220ENST00000556433 VWA1Q6PCB0 445 aa20.38■□□□□ 0.85
ACTN1-220ENST00000556433 APOOLQ6UXV4 268 aa20.38■□□□□ 0.85
ACTN1-220ENST00000556433 BTLAQ7Z6A9 289 aa20.38■□□□□ 0.85
ACTN1-220ENST00000556433 EXOC3L1Q86VI1 746 aa20.38■□□□□ 0.85
ACTN1-220ENST00000556433 OR2T11Q8NH01 316 aa20.38■□□□□ 0.85
ACTN1-220ENST00000556433 CEP70Q8NHQ1 597 aa20.38■□□□□ 0.85
ACTN1-220ENST00000556433 PPCDCQ96CD2 204 aa20.38■□□□□ 0.85
ACTN1-220ENST00000556433 PGM2Q96G03 612 aa20.38■□□□□ 0.85
ACTN1-220ENST00000556433 TSSK3Q96PN8 268 aa20.38■□□□□ 0.85
ACTN1-220ENST00000556433 GATA5Q9BWX5 397 aaPredicted RBP20.38■□□□□ 0.85
ACTN1-220ENST00000556433 PINK1Q9BXM7 581 aa20.38■□□□□ 0.85
ACTN1-220ENST00000556433 IQCGQ9H095 443 aaKnown RBP20.38■□□□□ 0.85
ACTN1-220ENST00000556433 REEP4Q9H6H4 257 aa20.38■□□□□ 0.85
ACTN1-220ENST00000556433 SH3BP4Q9P0V3 963 aa20.38■□□□□ 0.85
ACTN1-220ENST00000556433 BAIAP2L1Q9UHR4 511 aa20.38■□□□□ 0.85
ACTN1-220ENST00000556433 GMFGO60234 142 aa20.37■□□□□ 0.85
ACTN1-220ENST00000556433 TRIM13O60858 407 aa20.37■□□□□ 0.85
ACTN1-220ENST00000556433 ANGPTL1O95841 491 aa20.37■□□□□ 0.85
ACTN1-220ENST00000556433 LINC00032P0C843 101 aa20.37■□□□□ 0.85
ACTN1-220ENST00000556433 SDC1P18827 310 aa20.37■□□□□ 0.85
ACTN1-220ENST00000556433 MANFP55145 182 aaKnown RBP20.37■□□□□ 0.85
ACTN1-220ENST00000556433 ADAM8P78325 824 aa20.37■□□□□ 0.85
ACTN1-220ENST00000556433 PRR5P85299 388 aa20.37■□□□□ 0.85
ACTN1-220ENST00000556433 SLC18A2Q05940 514 aa20.37■□□□□ 0.85
ACTN1-220ENST00000556433 FOXD4Q12950 439 aaPredicted RBP20.37■□□□□ 0.85
ACTN1-220ENST00000556433 GRAMD1BQ3KR37 738 aa20.37■□□□□ 0.85
ACTN1-220ENST00000556433 VPS26BQ4G0F5 336 aa20.37■□□□□ 0.85
ACTN1-220ENST00000556433 RFTN2Q52LD8 501 aaPredicted RBP20.37■□□□□ 0.85
ACTN1-220ENST00000556433 NUP43Q8NFH3 380 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms