RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 FAM221AA4D161 298 aa11.43□□□□□ -0.58
SNX6-207ENST00000556303 H0Y3Z8 333 aa11.43□□□□□ -0.58
SNX6-207ENST00000556303 NKX2-2O95096 273 aa11.43□□□□□ -0.58
SNX6-207ENST00000556303 ZWINTO95229 277 aa11.43□□□□□ -0.58
SNX6-207ENST00000556303 SLU7O95391 586 aaKnown RBP11.43□□□□□ -0.58
SNX6-207ENST00000556303 CRHP06850 196 aa11.43□□□□□ -0.58
SNX6-207ENST00000556303 TUBBP07437 444 aa11.43□□□□□ -0.58
SNX6-207ENST00000556303 TMIGD3P0DMS9 266 aaPredicted RBP11.43□□□□□ -0.58
SNX6-207ENST00000556303 ZNF708P17019 499 aa11.43□□□□□ -0.58
SNX6-207ENST00000556303 GABRA3P34903 492 aa11.43□□□□□ -0.58
SNX6-207ENST00000556303 PCYT1AP49585 367 aa11.43□□□□□ -0.58
SNX6-207ENST00000556303 RPL38P63173 70 aaKnown RBP11.43□□□□□ -0.58
SNX6-207ENST00000556303 PRR5P85299 388 aa11.43□□□□□ -0.58
SNX6-207ENST00000556303 C17orf67Q0P5P2 114 aa11.43□□□□□ -0.58
SNX6-207ENST00000556303 XKR7Q5GH72 579 aa11.43□□□□□ -0.58
SNX6-207ENST00000556303 SH2D4BQ5SQS7 431 aa11.43□□□□□ -0.58
SNX6-207ENST00000556303 ZNF551Q7Z340 670 aaPredicted RBP11.43□□□□□ -0.58
SNX6-207ENST00000556303 CDH24Q86UP0 819 aa11.43□□□□□ -0.58
SNX6-207ENST00000556303 DDIASQ8IXT1 998 aa11.43□□□□□ -0.58
SNX6-207ENST00000556303 KIRREL3Q8IZU9 778 aa11.43□□□□□ -0.58
SNX6-207ENST00000556303 OR6Y1Q8NGX8 325 aa11.43□□□□□ -0.58
SNX6-207ENST00000556303 ZIM3Q96PE6 472 aa11.43□□□□□ -0.58
SNX6-207ENST00000556303 TSSK3Q96PN8 268 aa11.43□□□□□ -0.58
SNX6-207ENST00000556303 PRPF18Q99633 342 aaKnown RBP11.43□□□□□ -0.58
SNX6-207ENST00000556303 TUBA1CQ9BQE3 449 aa11.43□□□□□ -0.58
SNX6-207ENST00000556303 PIGMQ9H3S5 423 aa11.43□□□□□ -0.58
SNX6-207ENST00000556303 SSU72Q9NP77 194 aaKnown RBP11.43□□□□□ -0.58
SNX6-207ENST00000556303 ATAD3AQ9NVI7 634 aa11.43□□□□□ -0.58
SNX6-207ENST00000556303 GIN1Q9NXP7 522 aa11.43□□□□□ -0.58
SNX6-207ENST00000556303 SLC17A7Q9P2U7 560 aa11.43□□□□□ -0.58
SNX6-207ENST00000556303 STOML1Q9UBI4 398 aa11.43□□□□□ -0.58
SNX6-207ENST00000556303 PTGDR2Q9Y5Y4 395 aa11.43□□□□□ -0.58
SNX6-207ENST00000556303 MED12LQ86YW9 2145 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 NUP214P35658 2090 aaPredicted RBP11.42□□□□□ -0.58
SNX6-207ENST00000556303 PIP5K1BO14986 540 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 EMC8O43402 210 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 HCRTR2O43614 444 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 TYROBPO43914 113 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 NME6O75414 186 aaPredicted RBP11.42□□□□□ -0.58
SNX6-207ENST00000556303 CTAG2O75638 210 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 CHRNGP07510 517 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 BPGMP07738 259 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 BCKDHAP12694 445 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 UQCRC1P31930 480 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 HPCAL1P37235 193 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 ETV4P43268 484 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 DGKQP52824 942 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 CLDN18P56856 261 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 HSPB3Q12988 150 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 MAD2L1Q13257 205 aaPredicted RBP11.42□□□□□ -0.58
SNX6-207ENST00000556303 DAZAP2Q15038 168 aaPredicted RBP11.42□□□□□ -0.58
SNX6-207ENST00000556303 TESK1Q15569 626 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.42□□□□□ -0.58
SNX6-207ENST00000556303 SMU1Q2TAY7 513 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 GALNTL6Q49A17 601 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 FLYWCH1Q4VC44 716 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 ATP6AP1LQ52LC2 224 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 OR5M10Q6IEU7 315 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 OR2A2Q6IF42 318 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 SPNS3Q6ZMD2 512 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 CHMP1BQ7LBR1 199 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 TMEM200AQ86VY9 491 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 MISPQ8IVT2 679 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 C9orf106Q8NAJ2 232 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 NUP43Q8NFH3 380 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 OR2M3Q8NG83 312 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 PSMA8Q8TAA3 256 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 FAM110BQ8TC76 370 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 NINJ1Q92982 152 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 GFM2Q969S9 779 aaKnown RBP11.42□□□□□ -0.58
SNX6-207ENST00000556303 CIDECQ96AQ7 238 aaPredicted RBP11.42□□□□□ -0.58
SNX6-207ENST00000556303 MS4A4EQ96PG1 132 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 PIGQQ9BRB3 760 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 MECRQ9BV79 373 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 TBL1XR1Q9BZK7 514 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 DSN1Q9H410 356 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 CLCF1Q9UBD9 225 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 FIS1Q9Y3D6 152 aa11.42□□□□□ -0.58
SNX6-207ENST00000556303 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.41□□□□□ -0.58
SNX6-207ENST00000556303 CLCA1A8K7I4 914 aa11.41□□□□□ -0.58
SNX6-207ENST00000556303 KDM4EB2RXH2 506 aaPredicted RBP11.41□□□□□ -0.58
SNX6-207ENST00000556303 ALG1L2C9J202 215 aa11.41□□□□□ -0.58
SNX6-207ENST00000556303 SCAMP2O15127 329 aaKnown RBP11.41□□□□□ -0.58
SNX6-207ENST00000556303 CTIFO43310 598 aaKnown RBP11.41□□□□□ -0.58
SNX6-207ENST00000556303 AKAP10O43572 662 aa11.41□□□□□ -0.58
SNX6-207ENST00000556303 SCO2O43819 266 aa11.41□□□□□ -0.58
SNX6-207ENST00000556303 ZNF500O60304 480 aaPredicted RBP11.41□□□□□ -0.58
SNX6-207ENST00000556303 SPAG7O75391 227 aa11.41□□□□□ -0.58
SNX6-207ENST00000556303 TNFRSF21O75509 655 aa11.41□□□□□ -0.58
SNX6-207ENST00000556303 UTS2O95399 124 aa11.41□□□□□ -0.58
SNX6-207ENST00000556303 EPXP11678 715 aa11.41□□□□□ -0.58
SNX6-207ENST00000556303 HK1P19367 917 aa11.41□□□□□ -0.58
SNX6-207ENST00000556303 SERPINB4P48594 390 aa11.41□□□□□ -0.58
SNX6-207ENST00000556303 PRIM2P49643 509 aa11.41□□□□□ -0.58
SNX6-207ENST00000556303 DIO3P55073 304 aa11.41□□□□□ -0.58
SNX6-207ENST00000556303 B3GALT5-AS1P59052 145 aa11.41□□□□□ -0.58
SNX6-207ENST00000556303 SRYQ05066 204 aa11.41□□□□□ -0.58
SNX6-207ENST00000556303 ZNF385BQ569K4 471 aa11.41□□□□□ -0.58
SNX6-207ENST00000556303 CROCCP2Q86T23 111 aa11.41□□□□□ -0.58
SNX6-207ENST00000556303 MEIOBQ8N635 442 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms