RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 RTL10Q7L3V2 364 aa13.92□□□□□ -0.18
NEK9-209ENST00000556170 CXXC5Q7LFL8 322 aaKnown RBP13.92□□□□□ -0.18
NEK9-209ENST00000556170 UXS1Q8NBZ7 420 aa13.92□□□□□ -0.18
NEK9-209ENST00000556170 APH1BQ8WW43 257 aa13.92□□□□□ -0.18
NEK9-209ENST00000556170 PMEPA1Q969W9 287 aa13.92□□□□□ -0.18
NEK9-209ENST00000556170 ELP4Q96EB1 424 aa13.92□□□□□ -0.18
NEK9-209ENST00000556170 MMABQ96EY8 250 aaPredicted RBP13.92□□□□□ -0.18
NEK9-209ENST00000556170 DOK1Q99704 481 aa13.92□□□□□ -0.18
NEK9-209ENST00000556170 ZFYVE21Q9BQ24 234 aa13.92□□□□□ -0.18
NEK9-209ENST00000556170 GABARAPL3Q9BY60 117 aa13.92□□□□□ -0.18
NEK9-209ENST00000556170 IKZF2Q9UKS7 526 aa13.92□□□□□ -0.18
NEK9-209ENST00000556170 STUB1Q9UNE7 303 aa13.92□□□□□ -0.18
NEK9-209ENST00000556170 A0A087WUU8 490 aa13.92□□□□□ -0.18
NEK9-209ENST00000556170 A0A0A6YYC8 382 aaPredicted RBP13.92□□□□□ -0.18
NEK9-209ENST00000556170 A8MVJ9 347 aa13.92□□□□□ -0.18
NEK9-209ENST00000556170 BLOC1S5-TXNDC5H3BN57 136 aa13.92□□□□□ -0.18
NEK9-209ENST00000556170 I3L1I5 382 aaPredicted RBP13.92□□□□□ -0.18
NEK9-209ENST00000556170 IFNGP01579 166 aa13.92□□□□□ -0.18
NEK9-209ENST00000556170 SLC2A2P11168 524 aaPredicted RBP13.92□□□□□ -0.18
NEK9-209ENST00000556170 MNX1P50219 401 aaPredicted RBP13.92□□□□□ -0.18
NEK9-209ENST00000556170 ADPRHP54922 357 aa13.92□□□□□ -0.18
NEK9-209ENST00000556170 MLF2Q15773 248 aaPredicted RBP13.92□□□□□ -0.18
NEK9-209ENST00000556170 TRMT12Q53H54 448 aaKnown RBP13.92□□□□□ -0.18
NEK9-209ENST00000556170 ATP6V1C2Q8NEY4 427 aa13.92□□□□□ -0.18
NEK9-209ENST00000556170 FANK1Q8TC84 345 aa13.92□□□□□ -0.18
NEK9-209ENST00000556170 YIPF6Q96EC8 236 aa13.92□□□□□ -0.18
NEK9-209ENST00000556170 LINC00615Q96LM1 132 aaPredicted RBP13.92□□□□□ -0.18
NEK9-209ENST00000556170 WACQ9BTA9 647 aa13.92□□□□□ -0.18
NEK9-209ENST00000556170 DDX31Q9H8H2 851 aaKnown RBP13.92□□□□□ -0.18
NEK9-209ENST00000556170 A4GALTQ9NPC4 353 aa13.92□□□□□ -0.18
NEK9-209ENST00000556170 SCN2AQ99250 2005 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 C2orf74A8MZ97 194 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 M0R082 166 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 STX11O75558 287 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 MAOBP27338 520 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 POU6F2P78424 691 aaPredicted RBP13.91□□□□□ -0.18
NEK9-209ENST00000556170 TMEM196Q5HYL7 178 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 MZT2BQ6NZ67 158 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 PRICKLE2Q7Z3G6 844 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 FKBP10Q96AY3 582 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 GSDMCQ9BYG8 508 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 MTHFD2LQ9H903 347 aaPredicted RBP13.91□□□□□ -0.18
NEK9-209ENST00000556170 APOBEC3BQ9UH17 382 aaKnown RBP13.91□□□□□ -0.18
NEK9-209ENST00000556170 NAALAD2Q9Y3Q0 740 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 CMAHPQ9Y471 501 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 TRPM7Q96QT4 1865 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 PRKNO60260 465 aaPredicted RBP13.91□□□□□ -0.18
NEK9-209ENST00000556170 SDC3O75056 442 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 EGFP01133 1207 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 HLA-DPB1P04440 258 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 PYCR1P32322 319 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 MAN2A2P49641 1150 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 GPR18Q14330 331 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 ODF4Q2M2E3 257 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 INAVAQ3KP66 663 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 ELMOD2Q8IZ81 293 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 ZNF566Q969W8 418 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 OR8D2Q9GZM6 311 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 MOV10Q9HCE1 1003 aaKnown RBP13.91□□□□□ -0.18
NEK9-209ENST00000556170 A0A1B0GVT2 93 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 C12orf71A8MTZ7 269 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 FAM47E-STBD1D6RA91 191 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 H0YGG7 62 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 HYAL3O43820 417 aaPredicted RBP13.91□□□□□ -0.18
NEK9-209ENST00000556170 RPP14O95059 124 aaKnown RBP13.91□□□□□ -0.18
NEK9-209ENST00000556170 EFEMP2O95967 443 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 NR4A2P43354 598 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 ARF3P61204 181 aaPredicted RBP13.91□□□□□ -0.18
NEK9-209ENST00000556170 HHEXQ03014 270 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 CRYZQ08257 329 aaKnown RBP13.91□□□□□ -0.18
NEK9-209ENST00000556170 PUS10Q3MIT2 529 aaKnown RBP13.91□□□□□ -0.18
NEK9-209ENST00000556170 C1orf53Q5VUE5 145 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 SLC48A1Q6P1K1 146 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 ZNF517Q6ZMY9 492 aaPredicted RBP13.91□□□□□ -0.18
NEK9-209ENST00000556170 CAMKMTQ7Z624 323 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 TMEM255BQ8WV15 326 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 GAL3ST1Q99999 423 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 C6orf106Q9H6K1 298 aaPredicted RBP13.91□□□□□ -0.18
NEK9-209ENST00000556170 MAU2Q9Y6X3 613 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 PTPRDP23468 1912 aa13.91□□□□□ -0.18
NEK9-209ENST00000556170 OR2W5A6NFC9 320 aa13.9□□□□□ -0.18
NEK9-209ENST00000556170 SEMA4FO95754 770 aa13.9□□□□□ -0.18
NEK9-209ENST00000556170 FCER2P06734 321 aa13.9□□□□□ -0.18
NEK9-209ENST00000556170 GRPRP30550 384 aa13.9□□□□□ -0.18
NEK9-209ENST00000556170 WNT4P56705 351 aa13.9□□□□□ -0.18
NEK9-209ENST00000556170 DSG2Q14126 1118 aa13.9□□□□□ -0.18
NEK9-209ENST00000556170 LAX1Q8IWV1 398 aa13.9□□□□□ -0.18
NEK9-209ENST00000556170 OR9A4Q8NGU2 314 aa13.9□□□□□ -0.18
NEK9-209ENST00000556170 LMX1AQ8TE12 382 aa13.9□□□□□ -0.18
NEK9-209ENST00000556170 MOAP1Q96BY2 351 aa13.9□□□□□ -0.18
NEK9-209ENST00000556170 PITX2Q99697 317 aa13.9□□□□□ -0.18
NEK9-209ENST00000556170 PINK1Q9BXM7 581 aa13.9□□□□□ -0.18
NEK9-209ENST00000556170 POLMQ9NP87 494 aaPredicted RBP13.9□□□□□ -0.18
NEK9-209ENST00000556170 MAN2B1O00754 1011 aa13.9□□□□□ -0.18
NEK9-209ENST00000556170 TSPAN4O14817 238 aa13.9□□□□□ -0.18
NEK9-209ENST00000556170 KHNYNO15037 678 aaKnown RBP13.9□□□□□ -0.18
NEK9-209ENST00000556170 AGR2O95994 175 aa13.9□□□□□ -0.18
NEK9-209ENST00000556170 HIST1H2ABP04908 130 aa13.9□□□□□ -0.18
NEK9-209ENST00000556170 THEGLP0DJG4 465 aa13.9□□□□□ -0.18
NEK9-209ENST00000556170 PKLRP30613 574 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms