RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 OLFM2O95897 454 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 ITGAMP11215 1152 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 F3P13726 295 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 CD46P15529 392 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 RAB3AP20336 220 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 CD6P30203 668 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 HYAL2Q12891 473 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 SLC10A2Q12908 348 aaPredicted RBP10.13□□□□□ -0.79
ACTN1-216ENST00000556083 PPA1Q15181 289 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 SFT2D3Q587I9 215 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 C1orf220Q5T0J3 134 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 PRAMEF8Q5VWM4 474 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 PRAMEF7Q5VXH5 474 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 LEG1Q6P5S2 330 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 AGBL5Q8NDL9 886 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 CHDHQ8NE62 594 aaPredicted RBP10.13□□□□□ -0.79
ACTN1-216ENST00000556083 OR52E2Q8NGJ4 325 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 CASTOR1Q8WTX7 329 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 UBTD2Q8WUN7 234 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 TMEM239Q8WW34 195 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 FBXL20Q96IG2 436 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 INIPQ9NRY2 104 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 CACNG4Q9UBN1 327 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 LOC105369274A0A096LPK9 316 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 CXorf51AA0A1B0GTR3 108 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 C2orf72A6NCS6 295 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 TRIM64CA6NLI5 447 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 FOXO6A8MYZ6 492 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 RTCAO00442 366 aaKnown RBP10.13□□□□□ -0.79
ACTN1-216ENST00000556083 ADAM23O75077 832 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 GPR75O95800 540 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 GBAP04062 536 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 IL7P13232 177 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 FOSL2P15408 326 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 CD70P32970 193 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 IDUAP35475 653 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 CDKN2CP42773 168 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 LIPKQ5VXJ0 399 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 LIPIQ6XZB0 460 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 CPNE8Q86YQ8 564 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 OR4N4Q8N0Y3 316 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 CENPSQ8N2Z9 138 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 AP1S3Q96PC3 154 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 IGSF5Q9NSI5 407 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 TMEM100Q9NV29 134 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 MARCH4Q9P2E8 410 aaPredicted RBP10.13□□□□□ -0.79
ACTN1-216ENST00000556083 CORINQ9Y5Q5 1042 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 WIF1Q9Y5W5 379 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 NUBP2Q9Y5Y2 271 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 LRP5LA4QPB2 252 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 ZNF860A6NHJ4 632 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 H7C1Q1 480 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 KIAA0513O60268 411 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 CD38P28907 300 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 ALDH3B2P48448 385 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 ZNF140P52738 457 aaPredicted RBP10.12□□□□□ -0.79
ACTN1-216ENST00000556083 ARF3P61204 181 aaPredicted RBP10.12□□□□□ -0.79
ACTN1-216ENST00000556083 BLOC1S1P78537 153 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 ARF1P84077 181 aaKnown RBP10.12□□□□□ -0.79
ACTN1-216ENST00000556083 ATAD3CQ5T2N8 411 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 FAM69BQ5VUD6 431 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 WDR88Q6ZMY6 472 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 TMEM25Q86YD3 366 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 APCDD1Q8J025 514 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 LNX2Q8N448 690 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 CREB3L4Q8TEY5 395 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 TREX2Q9BQ50 279 aaPredicted RBP10.12□□□□□ -0.79
ACTN1-216ENST00000556083 RGCCQ9H4X1 137 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 LMAN1LQ9HAT1 526 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 DCAF13Q9NV06 445 aaKnown RBP10.12□□□□□ -0.79
ACTN1-216ENST00000556083 RLIMQ9NVW2 624 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 HS3ST2Q9Y278 367 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 I3L521 148 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 GPR171O14626 319 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 PRKACGP22612 351 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 PRKACBP22694 351 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 EIF1P41567 113 aaKnown RBP10.12□□□□□ -0.79
ACTN1-216ENST00000556083 OR1E2P47887 323 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 AKR1C2P52895 323 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 SLC26A5P58743 744 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 SRPXP78539 464 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 CDK3Q00526 305 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 CD83Q01151 205 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 CEACAM7Q14002 265 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 OR4D1Q15615 310 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 MSMO1Q15800 293 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 MPEG1Q2M385 716 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 UTS2BQ765I0 119 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 PDZD9Q8IXQ8 264 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 ZNF321PQ8N8H1 164 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 PEX11GQ96HA9 241 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 ZBED3Q96IU2 234 aaPredicted RBP10.12□□□□□ -0.79
ACTN1-216ENST00000556083 SYT5O00445 386 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 SNAP29O95721 258 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 PRLP01236 227 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 ALDOBP05062 364 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 ACPPP15309 386 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 MSX1P28360 303 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 CSNK1A1P48729 337 aa10.12□□□□□ -0.79
ACTN1-216ENST00000556083 ATP1B3P54709 279 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms