RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 RCBTB2O95199 551 aa12.51□□□□□ -0.41
PCNX4-209ENST00000555569 KCNH1O95259 989 aa12.51□□□□□ -0.41
PCNX4-209ENST00000555569 UTS2O95399 124 aa12.51□□□□□ -0.41
PCNX4-209ENST00000555569 BCKDHAP12694 445 aa12.51□□□□□ -0.41
PCNX4-209ENST00000555569 ZNF708P17019 499 aa12.51□□□□□ -0.41
PCNX4-209ENST00000555569 FRKP42685 505 aaPredicted RBP12.51□□□□□ -0.41
PCNX4-209ENST00000555569 PRKAG1P54619 331 aa12.51□□□□□ -0.41
PCNX4-209ENST00000555569 CLDN18P56856 261 aa12.51□□□□□ -0.41
PCNX4-209ENST00000555569 B3GALT5-AS1P59052 145 aa12.51□□□□□ -0.41
PCNX4-209ENST00000555569 STX5Q13190 355 aa12.51□□□□□ -0.41
PCNX4-209ENST00000555569 BCL2A1Q16548 175 aa12.51□□□□□ -0.41
PCNX4-209ENST00000555569 UGT3A2Q3SY77 523 aa12.51□□□□□ -0.41
PCNX4-209ENST00000555569 FLYWCH1Q4VC44 716 aa12.51□□□□□ -0.41
PCNX4-209ENST00000555569 ZCCHC23Q6ZST2 131 aa12.51□□□□□ -0.41
PCNX4-209ENST00000555569 R3HCC1LQ7Z5L2 792 aaKnown RBP12.51□□□□□ -0.41
PCNX4-209ENST00000555569 NUP43Q8NFH3 380 aa12.51□□□□□ -0.41
PCNX4-209ENST00000555569 CEP70Q8NHQ1 597 aa12.51□□□□□ -0.41
PCNX4-209ENST00000555569 AGR3Q8TD06 166 aa12.51□□□□□ -0.41
PCNX4-209ENST00000555569 HOXB13Q92826 284 aaPredicted RBP12.51□□□□□ -0.41
PCNX4-209ENST00000555569 WNT2BQ93097 391 aa12.51□□□□□ -0.41
PCNX4-209ENST00000555569 CAVIN3Q969G5 261 aa12.51□□□□□ -0.41
PCNX4-209ENST00000555569 MTERF3Q96E29 417 aa12.51□□□□□ -0.41
PCNX4-209ENST00000555569 RMND5BQ96G75 393 aaPredicted RBP12.51□□□□□ -0.41
PCNX4-209ENST00000555569 PPP3R2Q96LZ3 170 aa12.51□□□□□ -0.41
PCNX4-209ENST00000555569 G6PC3Q9BUM1 346 aa12.51□□□□□ -0.41
PCNX4-209ENST00000555569 RTN4RQ9BZR6 473 aa12.51□□□□□ -0.41
PCNX4-209ENST00000555569 ACSS1Q9NUB1 689 aaPredicted RBP12.51□□□□□ -0.41
PCNX4-209ENST00000555569 CRIM1Q9NZV1 1036 aa12.51□□□□□ -0.41
PCNX4-209ENST00000555569 MED11Q9P086 117 aa12.51□□□□□ -0.41
PCNX4-209ENST00000555569 CLCF1Q9UBD9 225 aa12.51□□□□□ -0.41
PCNX4-209ENST00000555569 AKAP9Q99996 3911 aa12.5□□□□□ -0.41
PCNX4-209ENST00000555569 CTAG2O75638 210 aa12.5□□□□□ -0.41
PCNX4-209ENST00000555569 NKX2-2O95096 273 aa12.5□□□□□ -0.41
PCNX4-209ENST00000555569 PEPDP12955 493 aa12.5□□□□□ -0.41
PCNX4-209ENST00000555569 DDX5P17844 614 aaKnown RBP12.5□□□□□ -0.41
PCNX4-209ENST00000555569 HK1P19367 917 aa12.5□□□□□ -0.41
PCNX4-209ENST00000555569 MAPK1P28482 360 aa12.5□□□□□ -0.41
PCNX4-209ENST00000555569 SERPINB5P36952 375 aa12.5□□□□□ -0.41
PCNX4-209ENST00000555569 HPCAL1P37235 193 aa12.5□□□□□ -0.41
PCNX4-209ENST00000555569 MAP3K8P41279 467 aa12.5□□□□□ -0.41
PCNX4-209ENST00000555569 FOXF2Q12947 444 aa12.5□□□□□ -0.41
PCNX4-209ENST00000555569 GANABQ14697 944 aaKnown RBP12.5□□□□□ -0.41
PCNX4-209ENST00000555569 TESK1Q15569 626 aa12.5□□□□□ -0.41
PCNX4-209ENST00000555569 VPS26BQ4G0F5 336 aa12.5□□□□□ -0.41
PCNX4-209ENST00000555569 WDR93Q6P2C0 686 aa12.5□□□□□ -0.41
PCNX4-209ENST00000555569 PLXDC2Q6UX71 529 aa12.5□□□□□ -0.41
PCNX4-209ENST00000555569 LRIG3Q6UXM1 1119 aa12.5□□□□□ -0.41
PCNX4-209ENST00000555569 SZRD1Q7Z422 152 aa12.5□□□□□ -0.41
PCNX4-209ENST00000555569 MARCH3Q86UD3 253 aa12.5□□□□□ -0.41
PCNX4-209ENST00000555569 KIF18BQ86Y91 864 aa12.5□□□□□ -0.41
PCNX4-209ENST00000555569 GRAMD2AQ8IUY3 354 aa12.5□□□□□ -0.41
PCNX4-209ENST00000555569 CDRT4Q8N9R6 151 aa12.5□□□□□ -0.41
PCNX4-209ENST00000555569 GPR151Q8TDV0 419 aa12.5□□□□□ -0.41
PCNX4-209ENST00000555569 DUSP19Q8WTR2 217 aa12.5□□□□□ -0.41
PCNX4-209ENST00000555569 FAM222BQ8WU58 562 aa12.5□□□□□ -0.41
PCNX4-209ENST00000555569 PIK3R3Q92569 461 aa12.5□□□□□ -0.41
PCNX4-209ENST00000555569 MS4A4EQ96PG1 132 aa12.5□□□□□ -0.41
PCNX4-209ENST00000555569 SFXN3Q9BWM7 321 aa12.5□□□□□ -0.41
PCNX4-209ENST00000555569 ACBD3Q9H3P7 528 aa12.5□□□□□ -0.41
PCNX4-209ENST00000555569 PTGES2Q9H7Z7 377 aa12.5□□□□□ -0.41
PCNX4-209ENST00000555569 DNAJB12Q9NXW2 375 aaKnown RBP12.5□□□□□ -0.41
PCNX4-209ENST00000555569 JKAMPQ9P055 326 aa12.5□□□□□ -0.41
PCNX4-209ENST00000555569 NTMQ9P121 344 aa12.5□□□□□ -0.41
PCNX4-209ENST00000555569 GIMAP2Q9UG22 337 aa12.5□□□□□ -0.41
PCNX4-209ENST00000555569 ATP6V1HQ9UI12 483 aa12.5□□□□□ -0.41
PCNX4-209ENST00000555569 HIVEP1P15822 2718 aa12.5□□□□□ -0.41
PCNX4-209ENST00000555569 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.49□□□□□ -0.41
PCNX4-209ENST00000555569 TMEM114B3SHH9 223 aa12.49□□□□□ -0.41
PCNX4-209ENST00000555569 EMC8O43402 210 aa12.49□□□□□ -0.41
PCNX4-209ENST00000555569 HCRTR2O43614 444 aa12.49□□□□□ -0.41
PCNX4-209ENST00000555569 PEX11AO75192 247 aa12.49□□□□□ -0.41
PCNX4-209ENST00000555569 SLU7O95391 586 aaKnown RBP12.49□□□□□ -0.41
PCNX4-209ENST00000555569 IGKV1D-16P01601 117 aa12.49□□□□□ -0.41
PCNX4-209ENST00000555569 BPGMP07738 259 aa12.49□□□□□ -0.41
PCNX4-209ENST00000555569 ACP2P11117 423 aa12.49□□□□□ -0.41
PCNX4-209ENST00000555569 CREB1P16220 341 aa12.49□□□□□ -0.41
PCNX4-209ENST00000555569 ARRB2P32121 409 aa12.49□□□□□ -0.41
PCNX4-209ENST00000555569 GRAMD1BQ3KR37 738 aa12.49□□□□□ -0.41
PCNX4-209ENST00000555569 ATP6AP1LQ52LC2 224 aa12.49□□□□□ -0.41
PCNX4-209ENST00000555569 XKR7Q5GH72 579 aa12.49□□□□□ -0.41
PCNX4-209ENST00000555569 RAET1LQ5VY80 246 aa12.49□□□□□ -0.41
PCNX4-209ENST00000555569 CHMP1BQ7LBR1 199 aa12.49□□□□□ -0.41
PCNX4-209ENST00000555569 EXOC3L1Q86VI1 746 aa12.49□□□□□ -0.41
PCNX4-209ENST00000555569 SLC9A6Q92581 669 aa12.49□□□□□ -0.41
PCNX4-209ENST00000555569 INTS12Q96CB8 462 aaKnown RBP12.49□□□□□ -0.41
PCNX4-209ENST00000555569 GIMAP5Q96F15 307 aa12.49□□□□□ -0.41
PCNX4-209ENST00000555569 GPATCH1Q9BRR8 931 aaKnown RBP12.49□□□□□ -0.41
PCNX4-209ENST00000555569 TMEM109Q9BVC6 243 aa12.49□□□□□ -0.41
PCNX4-209ENST00000555569 POLDIP3Q9BY77 421 aaKnown RBP12.49□□□□□ -0.41
PCNX4-209ENST00000555569 TBL1XR1Q9BZK7 514 aa12.49□□□□□ -0.41
PCNX4-209ENST00000555569 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.49□□□□□ -0.41
PCNX4-209ENST00000555569 V9GYY5 206 aaPredicted RBP12.49□□□□□ -0.41
PCNX4-209ENST00000555569 CELSR1Q9NYQ6 3014 aa12.49□□□□□ -0.41
PCNX4-209ENST00000555569 IGLV3-32A0A0A0MS00 114 aa12.48□□□□□ -0.41
PCNX4-209ENST00000555569 FAM221AA4D161 298 aa12.48□□□□□ -0.41
PCNX4-209ENST00000555569 TUBAL3A6NHL2 446 aa12.48□□□□□ -0.41
PCNX4-209ENST00000555569 A6NNC1 897 aa12.48□□□□□ -0.41
PCNX4-209ENST00000555569 LINC01387J3KSC0 135 aa12.48□□□□□ -0.41
PCNX4-209ENST00000555569 SCAMP2O15127 329 aaKnown RBP12.48□□□□□ -0.41
PCNX4-209ENST00000555569 TYROBPO43914 113 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms