RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 VPS39Q96JC1 886 aa1.32□□□□□ -2.2
SRP54-207ENST00000555535 FOPNLQ96NB1 174 aa1.32□□□□□ -2.2
SRP54-207ENST00000555535 CDX2Q99626 313 aaPredicted RBP1.32□□□□□ -2.2
SRP54-207ENST00000555535 BAG1Q99933 345 aaPredicted RBP1.32□□□□□ -2.2
SRP54-207ENST00000555535 NLNQ9BYT8 704 aa1.32□□□□□ -2.2
SRP54-207ENST00000555535 ZNF350Q9GZX5 532 aa1.32□□□□□ -2.2
SRP54-207ENST00000555535 NARFLQ9H6Q4 476 aa1.32□□□□□ -2.2
SRP54-207ENST00000555535 MAGEF1Q9HAY2 307 aa1.32□□□□□ -2.2
SRP54-207ENST00000555535 ABCB8Q9NUT2 735 aa1.32□□□□□ -2.2
SRP54-207ENST00000555535 ACOXLQ9NUZ1 547 aa1.32□□□□□ -2.2
SRP54-207ENST00000555535 DNAJC17Q9NVM6 304 aaKnown RBP1.32□□□□□ -2.2
SRP54-207ENST00000555535 OR1A1Q9P1Q5 309 aa1.32□□□□□ -2.2
SRP54-207ENST00000555535 ERVK-18Q9QC07 812 aa1.32□□□□□ -2.2
SRP54-207ENST00000555535 SPRR3Q9UBC9 169 aa1.32□□□□□ -2.2
SRP54-207ENST00000555535 CFDP1Q9UEE9 299 aaPredicted RBP1.32□□□□□ -2.2
SRP54-207ENST00000555535 DUSP12Q9UNI6 340 aa1.32□□□□□ -2.2
SRP54-207ENST00000555535 ITM2BQ9Y287 266 aa1.32□□□□□ -2.2
SRP54-207ENST00000555535 TP53TG5Q9Y2B4 290 aa1.32□□□□□ -2.2
SRP54-207ENST00000555535 IGHV1OR15-1A0A075B7D0 117 aa1.31□□□□□ -2.2
SRP54-207ENST00000555535 A0A0U1RQS6 177 aa1.31□□□□□ -2.2
SRP54-207ENST00000555535 NKX2-6A6NCS4 301 aa1.31□□□□□ -2.2
SRP54-207ENST00000555535 TMEM110-MUSTN1A8MSY1 372 aa1.31□□□□□ -2.2
SRP54-207ENST00000555535 A8MUA0 341 aa1.31□□□□□ -2.2
SRP54-207ENST00000555535 C19orf81C9J6K1 198 aa1.31□□□□□ -2.2
SRP54-207ENST00000555535 NPIPA2E9PIF3 369 aa1.31□□□□□ -2.2
SRP54-207ENST00000555535 WDR46O15213 610 aaKnown RBP1.31□□□□□ -2.2
SRP54-207ENST00000555535 FIBPO43427 364 aa1.31□□□□□ -2.2
SRP54-207ENST00000555535 APOA4P06727 396 aa1.31□□□□□ -2.2
SRP54-207ENST00000555535 RETP07949 1114 aa1.31□□□□□ -2.2
SRP54-207ENST00000555535 ADORA2BP29275 332 aa1.31□□□□□ -2.2
SRP54-207ENST00000555535 CDH5P33151 784 aaPredicted RBP1.31□□□□□ -2.2
SRP54-207ENST00000555535 RPS9P46781 194 aaKnown RBP1.31□□□□□ -2.2
SRP54-207ENST00000555535 ST8SIA6P61647 398 aa1.31□□□□□ -2.2
SRP54-207ENST00000555535 MRPS11P82912 194 aaKnown RBP1.31□□□□□ -2.2
SRP54-207ENST00000555535 GGTLC2Q14390 218 aa1.31□□□□□ -2.2
SRP54-207ENST00000555535 FAM71E1Q6IPT2 247 aa1.31□□□□□ -2.2
SRP54-207ENST00000555535 PET117Q6UWS5 81 aa1.31□□□□□ -2.2
SRP54-207ENST00000555535 GBP6Q6ZN66 633 aa1.31□□□□□ -2.2
SRP54-207ENST00000555535 TMEM110Q86TL2 294 aa1.31□□□□□ -2.2
SRP54-207ENST00000555535 PEX5LQ8IYB4 626 aa1.31□□□□□ -2.2
SRP54-207ENST00000555535 GPR137Q96N19 417 aa1.31□□□□□ -2.2
SRP54-207ENST00000555535 RBAKQ9NYW8 714 aaPredicted RBP1.31□□□□□ -2.2
SRP54-207ENST00000555535 DHRS7Q9Y394 339 aa1.31□□□□□ -2.2
SRP54-207ENST00000555535 C13orf42A0A1B0GVH6 325 aa1.3□□□□□ -2.2
SRP54-207ENST00000555535 CFLARO15519 480 aa1.3□□□□□ -2.2
SRP54-207ENST00000555535 EFNA2O43921 213 aa1.3□□□□□ -2.2
SRP54-207ENST00000555535 IGFBP1P08833 259 aaPredicted RBP1.3□□□□□ -2.2
SRP54-207ENST00000555535 ZNF14P17017 642 aaPredicted RBP1.3□□□□□ -2.2
SRP54-207ENST00000555535 BDNFP23560 247 aa1.3□□□□□ -2.2
SRP54-207ENST00000555535 NPY2RP49146 381 aa1.3□□□□□ -2.2
SRP54-207ENST00000555535 LIM2P55344 173 aa1.3□□□□□ -2.2
SRP54-207ENST00000555535 MAP2K1Q02750 393 aaPredicted RBP1.3□□□□□ -2.2
SRP54-207ENST00000555535 NUCB1Q02818 461 aa1.3□□□□□ -2.2
SRP54-207ENST00000555535 ZNF699Q32M78 642 aa1.3□□□□□ -2.2
SRP54-207ENST00000555535 KRTAP13-2Q52LG2 175 aa1.3□□□□□ -2.2
SRP54-207ENST00000555535 ZSCAN25Q6NSZ9 544 aa1.3□□□□□ -2.2
SRP54-207ENST00000555535 PNCKQ6P2M8 343 aa1.3□□□□□ -2.2
SRP54-207ENST00000555535 CLEC4GQ6UXB4 293 aa1.3□□□□□ -2.2
SRP54-207ENST00000555535 FAM47EQ6ZV65 393 aa1.3□□□□□ -2.2
SRP54-207ENST00000555535 FAM220AQ7Z4H9 259 aa1.3□□□□□ -2.2
SRP54-207ENST00000555535 HOOK3Q86VS8 718 aa1.3□□□□□ -2.2
SRP54-207ENST00000555535 RANBP3LQ86VV4 465 aaPredicted RBP1.3□□□□□ -2.2
SRP54-207ENST00000555535 CERS5Q8N5B7 392 aa1.3□□□□□ -2.2
SRP54-207ENST00000555535 ZNF709Q8N972 641 aa1.3□□□□□ -2.2
SRP54-207ENST00000555535 SLC22A8Q8TCC7 542 aa1.3□□□□□ -2.2
SRP54-207ENST00000555535 ZNF578Q96N58 590 aaPredicted RBP1.3□□□□□ -2.2
SRP54-207ENST00000555535 THUMPD3Q9BV44 507 aaKnown RBP1.3□□□□□ -2.2
SRP54-207ENST00000555535 KAT8Q9H7Z6 458 aaKnown RBP1.3□□□□□ -2.2
SRP54-207ENST00000555535 FANCFQ9NPI8 374 aa1.3□□□□□ -2.2
SRP54-207ENST00000555535 DNAJB9Q9UBS3 223 aa1.3□□□□□ -2.2
SRP54-207ENST00000555535 GIMAP2Q9UG22 337 aa1.3□□□□□ -2.2
SRP54-207ENST00000555535 IFT52Q9Y366 437 aa1.3□□□□□ -2.2
SRP54-207ENST00000555535 LRP4O75096 1905 aa1.3□□□□□ -2.2
SRP54-207ENST00000555535 IGHV3-64DA0A0J9YX35 117 aa1.29□□□□□ -2.2
SRP54-207ENST00000555535 K7N7A8 449 aa1.29□□□□□ -2.2
SRP54-207ENST00000555535 PES1O00541 588 aaKnown RBP1.29□□□□□ -2.2
SRP54-207ENST00000555535 ZNF264O43296 627 aa1.29□□□□□ -2.2
SRP54-207ENST00000555535 CD55P08174 381 aa1.29□□□□□ -2.2
SRP54-207ENST00000555535 GSTA1P08263 222 aa1.29□□□□□ -2.2
SRP54-207ENST00000555535 AQP1P29972 269 aa1.29□□□□□ -2.2
SRP54-207ENST00000555535 LONP1P36776 959 aaKnown RBP1.29□□□□□ -2.2
SRP54-207ENST00000555535 RPL29P47914 159 aaKnown RBP1.29□□□□□ -2.2
SRP54-207ENST00000555535 CSNK1DP48730 415 aa1.29□□□□□ -2.2
SRP54-207ENST00000555535 SERPINH1P50454 418 aaKnown RBP1.29□□□□□ -2.2
SRP54-207ENST00000555535 CSTF1Q05048 431 aaKnown RBP1.29□□□□□ -2.2
SRP54-207ENST00000555535 SYPL1Q16563 259 aa1.29□□□□□ -2.2
SRP54-207ENST00000555535 DNAJC21Q5F1R6 531 aaKnown RBP1.29□□□□□ -2.2
SRP54-207ENST00000555535 ZNF789Q5FWF6 425 aa1.29□□□□□ -2.2
SRP54-207ENST00000555535 PAGE3Q5JUK9 113 aa1.29□□□□□ -2.2
SRP54-207ENST00000555535 OR52W1Q6IF63 320 aa1.29□□□□□ -2.2
SRP54-207ENST00000555535 OLFM4Q6UX06 510 aa1.29□□□□□ -2.2
SRP54-207ENST00000555535 HACD2Q6Y1H2 254 aa1.29□□□□□ -2.2
SRP54-207ENST00000555535 TMEM252Q8N6L7 170 aa1.29□□□□□ -2.2
SRP54-207ENST00000555535 CCDC89Q8N998 374 aa1.29□□□□□ -2.2
SRP54-207ENST00000555535 OR4A16Q8NH70 328 aa1.29□□□□□ -2.2
SRP54-207ENST00000555535 DEPDC1BQ8WUY9 529 aa1.29□□□□□ -2.2
SRP54-207ENST00000555535 TEKT1Q969V4 418 aa1.29□□□□□ -2.2
SRP54-207ENST00000555535 TMEM80Q96HE8 168 aa1.29□□□□□ -2.2
SRP54-207ENST00000555535 CCDC114Q96M63 670 aa1.29□□□□□ -2.2
SRP54-207ENST00000555535 ZNF2Q9BSG1 426 aaPredicted RBP1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms