RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 TIGARQ9NQ88 270 aa4.25□□□□□ -1.73
VRK1-205ENST00000555402 UTP6Q9NYH9 597 aaKnown RBP4.25□□□□□ -1.73
VRK1-205ENST00000555402 PRODH2Q9UF12 536 aa4.25□□□□□ -1.73
VRK1-205ENST00000555402 CHRNA9Q9UGM1 479 aa4.25□□□□□ -1.73
VRK1-205ENST00000555402 BARX2Q9UMQ3 279 aaPredicted RBP4.25□□□□□ -1.73
VRK1-205ENST00000555402 IGHV3OR16-12A0A075B7B8 117 aa4.24□□□□□ -1.73
VRK1-205ENST00000555402 CLDN5O00501 218 aa4.24□□□□□ -1.73
VRK1-205ENST00000555402 PI15O43692 258 aa4.24□□□□□ -1.73
VRK1-205ENST00000555402 DUX1O43812 170 aa4.24□□□□□ -1.73
VRK1-205ENST00000555402 LCMT2O60294 686 aaKnown RBP4.24□□□□□ -1.73
VRK1-205ENST00000555402 STX11O75558 287 aa4.24□□□□□ -1.73
VRK1-205ENST00000555402 RENP00797 406 aa4.24□□□□□ -1.73
VRK1-205ENST00000555402 IGHV3-9P01782 118 aa4.24□□□□□ -1.73
VRK1-205ENST00000555402 IGHDP01880 384 aa4.24□□□□□ -1.73
VRK1-205ENST00000555402 MELTFP08582 738 aa4.24□□□□□ -1.73
VRK1-205ENST00000555402 HOXD4P09016 255 aaPredicted RBP4.24□□□□□ -1.73
VRK1-205ENST00000555402 RPA2P15927 270 aa4.24□□□□□ -1.73
VRK1-205ENST00000555402 MAGEA5P43359 124 aa4.24□□□□□ -1.73
VRK1-205ENST00000555402 RPS6P62753 249 aaKnown RBP4.24□□□□□ -1.73
VRK1-205ENST00000555402 PLOD1Q02809 727 aaPredicted RBP4.24□□□□□ -1.73
VRK1-205ENST00000555402 SLC10A1Q14973 349 aa4.24□□□□□ -1.73
VRK1-205ENST00000555402 LINC01620Q4KN68 170 aa4.24□□□□□ -1.73
VRK1-205ENST00000555402 CES3Q6UWW8 571 aa4.24□□□□□ -1.73
VRK1-205ENST00000555402 TMEM184AQ6ZMB5 413 aa4.24□□□□□ -1.73
VRK1-205ENST00000555402 DPY19L4Q7Z388 723 aa4.24□□□□□ -1.73
VRK1-205ENST00000555402 PARGQ86W56 976 aa4.24□□□□□ -1.73
VRK1-205ENST00000555402 DENND6BQ8NEG7 585 aa4.24□□□□□ -1.73
VRK1-205ENST00000555402 TOMM40LQ969M1 308 aa4.24□□□□□ -1.73
VRK1-205ENST00000555402 C9orf85Q96MD7 179 aa4.24□□□□□ -1.73
VRK1-205ENST00000555402 TXN2Q99757 166 aa4.24□□□□□ -1.73
VRK1-205ENST00000555402 SLC25A51Q9H1U9 297 aa4.24□□□□□ -1.73
VRK1-205ENST00000555402 RHOJQ9H4E5 214 aa4.24□□□□□ -1.73
VRK1-205ENST00000555402 RMND5AQ9H871 391 aa4.24□□□□□ -1.73
VRK1-205ENST00000555402 ARMCX1Q9P291 453 aa4.24□□□□□ -1.73
VRK1-205ENST00000555402 KLK13Q9UKR3 277 aa4.24□□□□□ -1.73
VRK1-205ENST00000555402 TDRD15B5MCY1 1934 aaKnown RBP4.24□□□□□ -1.73
VRK1-205ENST00000555402 XPO1O14980 1071 aaKnown RBP4.23□□□□□ -1.73
VRK1-205ENST00000555402 TM9SF1O15321 606 aa4.23□□□□□ -1.73
VRK1-205ENST00000555402 TBX19O60806 448 aa4.23□□□□□ -1.73
VRK1-205ENST00000555402 TM7SF2O76062 418 aa4.23□□□□□ -1.73
VRK1-205ENST00000555402 UFL1O94874 794 aa4.23□□□□□ -1.73
VRK1-205ENST00000555402 PRAMEF12O95522 483 aa4.23□□□□□ -1.73
VRK1-205ENST00000555402 CHRNA1P02708 482 aa4.23□□□□□ -1.73
VRK1-205ENST00000555402 UGT2B4P06133 528 aa4.23□□□□□ -1.73
VRK1-205ENST00000555402 CAPN2P17655 700 aa4.23□□□□□ -1.73
VRK1-205ENST00000555402 SDC1P18827 310 aa4.23□□□□□ -1.73
VRK1-205ENST00000555402 HMGCS2P54868 508 aa4.23□□□□□ -1.73
VRK1-205ENST00000555402 NTHL1P78549 312 aa4.23□□□□□ -1.73
VRK1-205ENST00000555402 CNTN2Q02246 1040 aa4.23□□□□□ -1.73
VRK1-205ENST00000555402 PPP1R3AQ16821 1122 aa4.23□□□□□ -1.73
VRK1-205ENST00000555402 MICAQ29983 383 aa4.23□□□□□ -1.73
VRK1-205ENST00000555402 ATAD3BQ5T9A4 648 aa4.23□□□□□ -1.73
VRK1-205ENST00000555402 LANCL3Q6ZV70 420 aa4.23□□□□□ -1.73
VRK1-205ENST00000555402 HSD11B1LQ7Z5J1 315 aa4.23□□□□□ -1.73
VRK1-205ENST00000555402 TBC1D21Q8IYX1 336 aa4.23□□□□□ -1.73
VRK1-205ENST00000555402 C17orf47Q8NEP4 570 aa4.23□□□□□ -1.73
VRK1-205ENST00000555402 OR6T1Q8NGN1 323 aa4.23□□□□□ -1.73
VRK1-205ENST00000555402 FNDC8Q8TC99 324 aa4.23□□□□□ -1.73
VRK1-205ENST00000555402 C18orf25Q96B23 403 aaPredicted RBP4.23□□□□□ -1.73
VRK1-205ENST00000555402 SDSLQ96GA7 329 aa4.23□□□□□ -1.73
VRK1-205ENST00000555402 PIWIL1Q96J94 861 aaKnown RBP4.23□□□□□ -1.73
VRK1-205ENST00000555402 PYGO2Q9BRQ0 406 aa4.23□□□□□ -1.73
VRK1-205ENST00000555402 TRIM6Q9C030 488 aaPredicted RBP4.23□□□□□ -1.73
VRK1-205ENST00000555402 NTNG1Q9Y2I2 539 aa4.23□□□□□ -1.73
VRK1-205ENST00000555402 KIF16BQ96L93 1317 aa4.22□□□□□ -1.73
VRK1-205ENST00000555402 PPIAL4CA0A0B4J2A2 164 aa4.22□□□□□ -1.73
VRK1-205ENST00000555402 IGKV6D-41A0A0C4DH26 115 aa4.22□□□□□ -1.73
VRK1-205ENST00000555402 GSAPA4D1B5 854 aa4.22□□□□□ -1.73
VRK1-205ENST00000555402 CCT8L1PA6NM43 557 aa4.22□□□□□ -1.73
VRK1-205ENST00000555402 EFCAB7A8K855 629 aa4.22□□□□□ -1.73
VRK1-205ENST00000555402 GPR89AB7ZAQ6 455 aa4.22□□□□□ -1.73
VRK1-205ENST00000555402 E9PAM4 449 aa4.22□□□□□ -1.73
VRK1-205ENST00000555402 KIAA0754O94854 1291 aa4.22□□□□□ -1.73
VRK1-205ENST00000555402 JCHAINP01591 159 aa4.22□□□□□ -1.73
VRK1-205ENST00000555402 GPR89BP0CG08 455 aa4.22□□□□□ -1.73
VRK1-205ENST00000555402 PPIAL4GP0DN37 164 aa4.22□□□□□ -1.73
VRK1-205ENST00000555402 IDSP22304 550 aa4.22□□□□□ -1.73
VRK1-205ENST00000555402 CHI3L1P36222 383 aaPredicted RBP4.22□□□□□ -1.73
VRK1-205ENST00000555402 ACADVLP49748 655 aa4.22□□□□□ -1.73
VRK1-205ENST00000555402 NOVA1P51513 510 aaKnown RBP4.22□□□□□ -1.73
VRK1-205ENST00000555402 ARHGDIBP52566 201 aa4.22□□□□□ -1.73
VRK1-205ENST00000555402 PJVKQ0ZLH3 352 aa4.22□□□□□ -1.73
VRK1-205ENST00000555402 IL18R1Q13478 541 aa4.22□□□□□ -1.73
VRK1-205ENST00000555402 CHI3L2Q15782 390 aa4.22□□□□□ -1.73
VRK1-205ENST00000555402 CAMK4Q16566 473 aa4.22□□□□□ -1.73
VRK1-205ENST00000555402 TATDN3Q17R31 274 aa4.22□□□□□ -1.73
VRK1-205ENST00000555402 LGSNQ5TDP6 509 aa4.22□□□□□ -1.73
VRK1-205ENST00000555402 MEDAGQ5VYS4 303 aa4.22□□□□□ -1.73
VRK1-205ENST00000555402 CYS1Q717R9 158 aa4.22□□□□□ -1.73
VRK1-205ENST00000555402 PPP1R42Q7Z4L9 355 aa4.22□□□□□ -1.73
VRK1-205ENST00000555402 HIPK1Q86Z02 1210 aa4.22□□□□□ -1.73
VRK1-205ENST00000555402 SPAG16Q8N0X2 631 aa4.22□□□□□ -1.73
VRK1-205ENST00000555402 ZSCAN4Q8NAM6 433 aaPredicted RBP4.22□□□□□ -1.73
VRK1-205ENST00000555402 MAPK1IP1LQ8NDC0 245 aa4.22□□□□□ -1.73
VRK1-205ENST00000555402 OR2L2Q8NH16 312 aa4.22□□□□□ -1.73
VRK1-205ENST00000555402 ZBED6CLQ96FA7 236 aaPredicted RBP4.22□□□□□ -1.73
VRK1-205ENST00000555402 MCCC1Q96RQ3 725 aaPredicted RBP4.22□□□□□ -1.73
VRK1-205ENST00000555402 PUS3Q9BZE2 481 aaKnown RBP4.22□□□□□ -1.73
VRK1-205ENST00000555402 UBXN6Q9BZV1 441 aa4.22□□□□□ -1.73
VRK1-205ENST00000555402 ZBP1Q9H171 429 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms