RNA–Protein interactions for RNA: ENST00000555381.5

ATXN3-232, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 803 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-232ENST00000555381 TMIGD1Q6UXZ0 262 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 ZNF704Q6ZNC4 412 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-232ENST00000555381 SLC29A4Q7RTT9 530 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 PEX26Q7Z412 305 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 KIAA1328Q86T90 577 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 PRUNE1Q86TP1 453 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 YRDCQ86U90 279 aaKnown RBP4.35□□□□□ -1.71
ATXN3-232ENST00000555381 THOC6Q86W42 341 aaKnown RBP4.35□□□□□ -1.71
ATXN3-232ENST00000555381 CNGA4Q8IV77 575 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 VSTM4Q8IW00 320 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 DENND6AQ8IWF6 608 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 C9orf40Q8IXQ3 194 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 LMNTD2Q8IXW0 634 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 CCDC170Q8IYT3 715 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 OR2L5Q8NG80 312 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 SPPL2AQ8TCT8 520 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 ATG4AQ8WYN0 398 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 ROBO4Q8WZ75 1007 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 CCT6BQ92526 530 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 CAVIN3Q969G5 261 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 ANKRD9Q96BM1 317 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-232ENST00000555381 PGM2Q96G03 612 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 ZC3HAV1LQ96H79 300 aaKnown RBP4.35□□□□□ -1.71
ATXN3-232ENST00000555381 TMEM41AQ96HV5 264 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 ART5Q96L15 291 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 MRGPRX4Q96LA9 322 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 RILPQ96NA2 401 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 DGAT2Q96PD7 388 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 KRT12Q99456 494 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 PIGQQ9BRB3 760 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 ROGDIQ9GZN7 287 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 REXO4Q9GZR2 422 aaKnown RBP4.35□□□□□ -1.71
ATXN3-232ENST00000555381 NT5DC2Q9H857 520 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 LYRM4Q9HD34 91 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 FBXO6Q9NRD1 293 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-232ENST00000555381 SYBUQ9NX95 663 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 TAS2R13Q9NYV9 303 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 LPAR3Q9UBY5 353 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 PTBP2Q9UKA9 531 aaKnown RBP4.35□□□□□ -1.71
ATXN3-232ENST00000555381 TFR2Q9UP52 801 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 LAMP3Q9UQV4 416 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 SLC22A14Q9Y267 594 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 WIF1Q9Y5W5 379 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 SPACA6W5XKT8 324 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 DNAJC13O75165 2243 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 ZNF407Q9C0G0 2248 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 ARID1AO14497 2285 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 TLN2Q9Y4G6 2542 aa4.35□□□□□ -1.71
ATXN3-232ENST00000555381 C2orf92A0A1B0GVN3 265 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-232ENST00000555381 GAGE12BA1L429 117 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 GAGE12HA6NDE8 117 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 ANKDD1BA6NHY2 528 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 SDR42E2A6NKP2 422 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 OR6C76A6NM76 312 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 CDC7O00311 574 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 HS3ST1O14792 307 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 CBR3O75828 277 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 LRATO95237 230 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 TGM6O95932 706 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 SBK3P0C264 359 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 ZSCAN5DPP0CG00 497 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 C1GALT1C1LP0DN25 315 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 GNAZP19086 355 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 GCSHP23434 173 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 CERS1P27544 350 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 PTPN6P29350 595 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 HNRNPH1P31943 449 aaKnown RBP4.34□□□□□ -1.71
ATXN3-232ENST00000555381 ACVR1BP36896 505 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 CASP3P42574 277 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 KCNJ5P48544 419 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 FBXW4P57775 412 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 BASP1P80723 227 aaKnown RBP4.34□□□□□ -1.71
ATXN3-232ENST00000555381 IGLV3-21P80748 117 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-232ENST00000555381 TIAL1Q01085 375 aaKnown RBP eCLIP4.34□□□□□ -1.71
ATXN3-232ENST00000555381 ID2Q02363 134 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 FUT7Q11130 342 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 GPS1Q13098 491 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 FGFBP1Q14512 234 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 RPS6KA2Q15349 733 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 ADPRMQ3LIE5 342 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 TIGD2Q4W5G0 525 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 C6orf52Q5T4I8 152 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 ADAM5Q6NVV9 412 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 PLXDC2Q6UX71 529 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 DNM1P46Q6ZS02 220 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 CHMP1BQ7LBR1 199 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 ZNF550Q7Z398 422 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 P4HA3Q7Z4N8 544 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 TMPRSS11BQ86T26 416 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 GRAMD2AQ8IUY3 354 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 OR4N5Q8IXE1 308 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 SYCE1Q8N0S2 351 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 GCNT2Q8N0V5 402 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 KRT78Q8N1N4 520 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 CNEP1R1Q8N9A8 125 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 LRRC57Q8N9N7 239 aa4.34□□□□□ -1.71
ATXN3-232ENST00000555381 SRFBP1Q8NEF9 429 aaKnown RBP4.34□□□□□ -1.71
ATXN3-232ENST00000555381 FAM83FQ8NEG4 500 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-232ENST00000555381 OR56A1Q8NGH5 318 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms