RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 ZNF708P17019 499 aa10.74□□□□□ -0.69
VRK1-204ENST00000555351 PRPS1L1P21108 318 aa10.74□□□□□ -0.69
VRK1-204ENST00000555351 SERPINB4P48594 390 aa10.74□□□□□ -0.69
VRK1-204ENST00000555351 PCYT1AP49585 367 aa10.74□□□□□ -0.69
VRK1-204ENST00000555351 LHX2P50458 406 aa10.74□□□□□ -0.69
VRK1-204ENST00000555351 DLX5P56178 289 aa10.74□□□□□ -0.69
VRK1-204ENST00000555351 ZNF844Q08AG5 666 aa10.74□□□□□ -0.69
VRK1-204ENST00000555351 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.74□□□□□ -0.69
VRK1-204ENST00000555351 KRT71Q3SY84 523 aa10.74□□□□□ -0.69
VRK1-204ENST00000555351 ZNF385BQ569K4 471 aa10.74□□□□□ -0.69
VRK1-204ENST00000555351 TNFAIP8L3Q5GJ75 292 aa10.74□□□□□ -0.69
VRK1-204ENST00000555351 EXOSC6Q5RKV6 272 aaKnown RBP10.74□□□□□ -0.69
VRK1-204ENST00000555351 C6orf136Q5SQH8 315 aa10.74□□□□□ -0.69
VRK1-204ENST00000555351 ARSKQ6UWY0 536 aa10.74□□□□□ -0.69
VRK1-204ENST00000555351 WDR53Q7Z5U6 358 aaPredicted RBP10.74□□□□□ -0.69
VRK1-204ENST00000555351 NUDCD3Q8IVD9 361 aa10.74□□□□□ -0.69
VRK1-204ENST00000555351 LRRC34Q8IZ02 419 aa10.74□□□□□ -0.69
VRK1-204ENST00000555351 RELL2Q8NC24 303 aaPredicted RBP10.74□□□□□ -0.69
VRK1-204ENST00000555351 NAXEQ8NCW5 288 aa10.74□□□□□ -0.69
VRK1-204ENST00000555351 NUP43Q8NFH3 380 aa10.74□□□□□ -0.69
VRK1-204ENST00000555351 OR2M3Q8NG83 312 aa10.74□□□□□ -0.69
VRK1-204ENST00000555351 FAM110BQ8TC76 370 aa10.74□□□□□ -0.69
VRK1-204ENST00000555351 RNASE6Q93091 150 aaKnown RBP10.74□□□□□ -0.69
VRK1-204ENST00000555351 GFM2Q969S9 779 aaKnown RBP10.74□□□□□ -0.69
VRK1-204ENST00000555351 TRIB1Q96RU8 372 aa10.74□□□□□ -0.69
VRK1-204ENST00000555351 PRPF18Q99633 342 aaKnown RBP10.74□□□□□ -0.69
VRK1-204ENST00000555351 SH3GL2Q99962 352 aa10.74□□□□□ -0.69
VRK1-204ENST00000555351 ZNF559Q9BR84 538 aa10.74□□□□□ -0.69
VRK1-204ENST00000555351 SFXN3Q9BWM7 321 aa10.74□□□□□ -0.69
VRK1-204ENST00000555351 ASIC5Q9NY37 505 aa10.74□□□□□ -0.69
VRK1-204ENST00000555351 JKAMPQ9P055 326 aa10.74□□□□□ -0.69
VRK1-204ENST00000555351 BAIAP2L1Q9UHR4 511 aa10.74□□□□□ -0.69
VRK1-204ENST00000555351 ZDHHC2Q9UIJ5 367 aa10.74□□□□□ -0.69
VRK1-204ENST00000555351 DKKL1Q9UK85 242 aa10.74□□□□□ -0.69
VRK1-204ENST00000555351 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 ALG1L2C9J202 215 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 H0Y3Z8 333 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 AKAP10O43572 662 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 HCRTR2O43614 444 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 GOSR1O95249 250 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 SERPINE1P05121 402 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 CRHP06850 196 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 KRT16P08779 473 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 DHRS4L1P0CG22 281 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 CREB1P16220 341 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 TBXA2RP21731 343 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 BMP5P22003 454 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 ARRB2P32121 409 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 GABRA3P34903 492 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 PRIM2P49643 509 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 ZNF136P52737 540 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 CLDN18P56856 261 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 EEFSECP57772 596 aaKnown RBP10.73□□□□□ -0.69
VRK1-204ENST00000555351 B3GALT5-AS1P59052 145 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 SORDQ00796 357 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 LSM12Q3MHD2 195 aaKnown RBP10.73□□□□□ -0.69
VRK1-204ENST00000555351 MFSD12Q6NUT3 480 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 ZCCHC23Q6ZST2 131 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 CAMKMTQ7Z624 323 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 KIF18BQ86Y91 864 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 GPR151Q8TDV0 419 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 OR5P2Q8WZ92 322 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 CIDECQ96AQ7 238 aaPredicted RBP10.73□□□□□ -0.69
VRK1-204ENST00000555351 MOAP1Q96BY2 351 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 COQ8BQ96D53 544 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 GIMAP5Q96F15 307 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 PGM2Q96G03 612 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 SFXN2Q96NB2 322 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 STACQ99469 402 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 TUBA1CQ9BQE3 449 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 G6PC3Q9BUM1 346 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 NEUROD4Q9HD90 331 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 DUSP22Q9NRW4 184 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 CLCF1Q9UBD9 225 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 HAO1Q9UJM8 370 aa10.73□□□□□ -0.69
VRK1-204ENST00000555351 OTOGQ6ZRI0 2925 aa10.72□□□□□ -0.69
VRK1-204ENST00000555351 A0A087WZY1 265 aa10.72□□□□□ -0.69
VRK1-204ENST00000555351 A0A1W2PRB8 838 aa10.72□□□□□ -0.69
VRK1-204ENST00000555351 B4DXG7 233 aa10.72□□□□□ -0.69
VRK1-204ENST00000555351 PEX11AO75192 247 aa10.72□□□□□ -0.69
VRK1-204ENST00000555351 ZWINTO95229 277 aa10.72□□□□□ -0.69
VRK1-204ENST00000555351 UTS2O95399 124 aa10.72□□□□□ -0.69
VRK1-204ENST00000555351 ALOX5P09917 674 aa10.72□□□□□ -0.69
VRK1-204ENST00000555351 TMIGD3P0DMS9 266 aaPredicted RBP10.72□□□□□ -0.69
VRK1-204ENST00000555351 DIO3P55073 304 aa10.72□□□□□ -0.69
VRK1-204ENST00000555351 EMX2Q04743 252 aa10.72□□□□□ -0.69
VRK1-204ENST00000555351 MYBPHQ13203 477 aa10.72□□□□□ -0.69
VRK1-204ENST00000555351 CPTPQ5TA50 214 aa10.72□□□□□ -0.69
VRK1-204ENST00000555351 OR2A2Q6IF42 318 aa10.72□□□□□ -0.69
VRK1-204ENST00000555351 ANKRD26P1Q6NSI1 321 aa10.72□□□□□ -0.69
VRK1-204ENST00000555351 EXOC3L1Q86VI1 746 aa10.72□□□□□ -0.69
VRK1-204ENST00000555351 MISPQ8IVT2 679 aa10.72□□□□□ -0.69
VRK1-204ENST00000555351 RIMKLAQ8IXN7 391 aa10.72□□□□□ -0.69
VRK1-204ENST00000555351 FNDC5Q8NAU1 212 aa10.72□□□□□ -0.69
VRK1-204ENST00000555351 CLHC1Q8NHS4 586 aa10.72□□□□□ -0.69
VRK1-204ENST00000555351 PPP1R14CQ8TAE6 165 aa10.72□□□□□ -0.69
VRK1-204ENST00000555351 SFXN5Q8TD22 340 aa10.72□□□□□ -0.69
VRK1-204ENST00000555351 ACTRT2Q8TDY3 377 aa10.72□□□□□ -0.69
VRK1-204ENST00000555351 DUSP19Q8WTR2 217 aa10.72□□□□□ -0.69
VRK1-204ENST00000555351 FAM222BQ8WU58 562 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms